RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 CYP3A7-CYP3A51PA0A087WV96 503 aa16.33■□□□□ 0.21
RFTN1-203ENST00000432519 VIL1P09327 827 aaKnown RBP16.33■□□□□ 0.21
RFTN1-203ENST00000432519 CYP3A7P24462 503 aa16.33■□□□□ 0.21
RFTN1-203ENST00000432519 SEMA3FQ13275 785 aa16.33■□□□□ 0.21
RFTN1-203ENST00000432519 COBLL1Q53SF7 1204 aa16.33■□□□□ 0.21
RFTN1-203ENST00000432519 ARSHQ5FYA8 562 aa16.33■□□□□ 0.21
RFTN1-203ENST00000432519 ZNF569Q5MCW4 686 aa16.33■□□□□ 0.21
RFTN1-203ENST00000432519 LRRC55Q6ZSA7 311 aa16.33■□□□□ 0.21
RFTN1-203ENST00000432519 OR8K1Q8NGG5 319 aa16.33■□□□□ 0.21
RFTN1-203ENST00000432519 ARHGAP29Q52LW3 1261 aa16.33■□□□□ 0.2
RFTN1-203ENST00000432519 CATSPER3Q86XQ3 398 aa16.33■□□□□ 0.2
RFTN1-203ENST00000432519 GUF1Q8N442 669 aaKnown RBP16.33■□□□□ 0.2
RFTN1-203ENST00000432519 CGNQ9P2M7 1197 aaKnown RBP16.33■□□□□ 0.2
RFTN1-203ENST00000432519 PLA2G4BP0C869 781 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 TRIM21P19474 475 aaKnown RBP16.32■□□□□ 0.2
RFTN1-203ENST00000432519 TRIM14Q14142 442 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 DLGAP5Q15398 846 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 HYIQ5T013 277 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 SUPT20HQ8NEM7 779 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 ZSWIM4Q9H7M6 989 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 FBXO28Q9NVF7 368 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 EPN1Q9Y6I3 576 aaPredicted RBP16.32■□□□□ 0.2
RFTN1-203ENST00000432519 RGPD3A6NKT7 1758 aaPredicted RBP16.32■□□□□ 0.2
RFTN1-203ENST00000432519 RGPD4Q7Z3J3 1758 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 NDUFA10O95299 355 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 SPATA31C1P0DKV0 1188 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 UBXN2AP68543 259 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 BTNL9Q6UXG8 535 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 SLC35F6Q8N357 371 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 NOC3LQ8WTT2 800 aaKnown RBP16.32■□□□□ 0.2
RFTN1-203ENST00000432519 PANK4Q9NVE7 773 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 PCDHA2Q9Y5H9 948 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 PSME4Q14997 1843 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 CYP11B2P19099 503 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 CYP4A11Q02928 519 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 NBPF9Q3BBW0 867 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 NCAPH2Q6IBW4 605 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 CCDC174Q6PII3 467 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 ZBTB21Q9ULJ3 1066 aa16.32■□□□□ 0.2
RFTN1-203ENST00000432519 MSH4O15457 936 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 PLEKP08567 350 aaPredicted RBP16.31■□□□□ 0.2
RFTN1-203ENST00000432519 SREBF1P36956 1147 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 HERVK_113P62684 666 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 AP3B2Q13367 1082 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 GPBP1Q86WP2 473 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 MNS1Q8NEH6 495 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 ZNF397Q8NF99 534 aaPredicted RBP16.31■□□□□ 0.2
RFTN1-203ENST00000432519 FAM151AQ8WW52 585 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 RCCD1A6NED2 376 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 SPDYE3A6NKU9 549 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 EGFRP00533 1210 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 H2AFXP16104 143 aaPredicted RBP16.31■□□□□ 0.2
RFTN1-203ENST00000432519 POLD1P28340 1107 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 MMP14P50281 582 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 CASP5P51878 434 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 STAT2P52630 851 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 SPDYE2Q495Y8 402 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 ZCWPW2Q504Y3 356 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 PKNOX2Q96KN3 472 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 PCMTD1Q96MG8 357 aaPredicted RBP16.31■□□□□ 0.2
RFTN1-203ENST00000432519 FAM207AQ9NSI2 230 aaPredicted RBP16.31■□□□□ 0.2
RFTN1-203ENST00000432519 HERC5Q9UII4 1024 aaKnown RBP16.31■□□□□ 0.2
RFTN1-203ENST00000432519 TMX2Q9Y320 296 aa16.31■□□□□ 0.2
RFTN1-203ENST00000432519 EML1O00423 815 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 CFBP00751 764 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 SLC12A3P55017 1021 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 PPP2R3AQ06190 1150 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.2
RFTN1-203ENST00000432519 DGKZQ13574 1117 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 FAM26FQ5R3K3 315 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 NDST4Q9H3R1 872 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 TMOD2Q9NZR1 351 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 SIK3Q9Y2K2 1263 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 KIF5CO60282 957 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 VWA3BQ502W6 1294 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 OGFOD1Q8N543 542 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 ERGIC2Q96RQ1 377 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 PSMD1Q99460 953 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 ZHX3Q9H4I2 956 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 RGL1Q9NZL6 768 aa16.3■□□□□ 0.2
RFTN1-203ENST00000432519 APBA1Q02410 837 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 MEA1Q16626 185 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 MYOCDQ8IZQ8 938 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 UBXN4Q92575 508 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 WDR18Q9BV38 432 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 NT5C3AQ9H0P0 336 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 GLT8D2Q9H1C3 349 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 PRDM10Q9NQV6 1147 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 GUCA1BQ9UMX6 200 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 DUSP10Q9Y6W6 482 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 CLCN6P51797 869 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 CYP27A1Q02318 531 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 Q4G0T1 1027 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 HERC4Q5GLZ8 1057 aaPredicted RBP16.29■□□□□ 0.2
RFTN1-203ENST00000432519 FAM114A1Q8IWE2 563 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 RTKN2Q8IZC4 609 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 SCFD1Q8WVM8 642 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 LACRTQ9GZZ8 138 aa16.29■□□□□ 0.2
RFTN1-203ENST00000432519 VAV3Q9UKW4 847 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms