RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 CHMLP26374 656 aa17.55■□□□□ 0.4
CSNK1E-208ENST00000431611 CCND2P30279 289 aa17.55■□□□□ 0.4
CSNK1E-208ENST00000431611 WDR5P61964 334 aaKnown RBP17.55■□□□□ 0.4
CSNK1E-208ENST00000431611 PTK7Q13308 1070 aa17.55■□□□□ 0.4
CSNK1E-208ENST00000431611 WTAPQ15007 396 aa17.55■□□□□ 0.4
CSNK1E-208ENST00000431611 SKIV2LQ15477 1246 aaKnown RBP17.55■□□□□ 0.4
CSNK1E-208ENST00000431611 SLC35G1Q2M3R5 365 aa17.55■□□□□ 0.4
CSNK1E-208ENST00000431611 HSDL1Q3SXM5 330 aa17.55■□□□□ 0.4
CSNK1E-208ENST00000431611 CNKSR3Q6P9H4 555 aa17.55■□□□□ 0.4
CSNK1E-208ENST00000431611 FCHSD1Q86WN1 690 aa17.55■□□□□ 0.4
CSNK1E-208ENST00000431611 IL31RAQ8NI17 732 aa17.55■□□□□ 0.4
CSNK1E-208ENST00000431611 ZBED2Q9BTP6 218 aa17.55■□□□□ 0.4
CSNK1E-208ENST00000431611 SCN5AQ14524 2016 aa17.55■□□□□ 0.4
CSNK1E-208ENST00000431611 GBF1Q92538 1859 aa17.54■□□□□ 0.4
CSNK1E-208ENST00000431611 PNMA6FA0A0J9YX94 578 aa17.54■□□□□ 0.4
CSNK1E-208ENST00000431611 EPOPA6NHQ4 379 aa17.54■□□□□ 0.4
CSNK1E-208ENST00000431611 CYTH3O43739 400 aa17.54■□□□□ 0.4
CSNK1E-208ENST00000431611 NBNO60934 754 aa17.54■□□□□ 0.4
CSNK1E-208ENST00000431611 TROAPQ12815 778 aa17.54■□□□□ 0.4
CSNK1E-208ENST00000431611 SART3Q15020 963 aaKnown RBP17.54■□□□□ 0.4
CSNK1E-208ENST00000431611 NCOA7Q8NI08 942 aa17.54■□□□□ 0.4
CSNK1E-208ENST00000431611 ZFP91Q96JP5 570 aaPredicted RBP17.54■□□□□ 0.4
CSNK1E-208ENST00000431611 UHRF1Q96T88 793 aaPredicted RBP17.54■□□□□ 0.4
CSNK1E-208ENST00000431611 SENP2Q9HC62 589 aa17.54■□□□□ 0.4
CSNK1E-208ENST00000431611 ABHD14A-ACY1A0A1B0GW23 586 aa17.53■□□□□ 0.4
CSNK1E-208ENST00000431611 E7EWF7 191 aa17.53■□□□□ 0.4
CSNK1E-208ENST00000431611 UBA1P22314 1058 aaKnown RBP17.53■□□□□ 0.4
CSNK1E-208ENST00000431611 ZNF200P98182 395 aaPredicted RBP17.53■□□□□ 0.4
CSNK1E-208ENST00000431611 SP2Q02086 613 aa17.53■□□□□ 0.4
CSNK1E-208ENST00000431611 AAK1Q2M2I8 961 aa17.53■□□□□ 0.4
CSNK1E-208ENST00000431611 TRIM71Q2Q1W2 868 aaKnown RBP17.53■□□□□ 0.4
CSNK1E-208ENST00000431611 TMCO2Q7Z6W1 182 aaPredicted RBP17.53■□□□□ 0.4
CSNK1E-208ENST00000431611 CATIPQ7Z7H3 387 aa17.53■□□□□ 0.4
CSNK1E-208ENST00000431611 MLXIPQ9HAP2 919 aa17.53■□□□□ 0.4
CSNK1E-208ENST00000431611 SUPT16HQ9Y5B9 1047 aaKnown RBP17.53■□□□□ 0.4
CSNK1E-208ENST00000431611 TAF6LQ9Y6J9 622 aa17.53■□□□□ 0.4
CSNK1E-208ENST00000431611 TANC1Q9C0D5 1861 aa17.52■□□□□ 0.4
CSNK1E-208ENST00000431611 TTC28Q96AY4 2481 aa17.52■□□□□ 0.4
CSNK1E-208ENST00000431611 EFCAB14O75071 495 aa17.52■□□□□ 0.4
CSNK1E-208ENST00000431611 DEFB103AP81534 67 aa17.52■□□□□ 0.4
CSNK1E-208ENST00000431611 TFF2Q03403 129 aa17.52■□□□□ 0.4
CSNK1E-208ENST00000431611 IKBKEQ14164 716 aa17.52■□□□□ 0.4
CSNK1E-208ENST00000431611 ZNF618Q5T7W0 954 aa17.52■□□□□ 0.4
CSNK1E-208ENST00000431611 KRT40Q6A162 431 aa17.52■□□□□ 0.4
CSNK1E-208ENST00000431611 TRAF7Q6Q0C0 670 aa17.52■□□□□ 0.4
CSNK1E-208ENST00000431611 WNT8BQ93098 351 aa17.52■□□□□ 0.4
CSNK1E-208ENST00000431611 C16orf70Q9BSU1 422 aa17.52■□□□□ 0.4
CSNK1E-208ENST00000431611 CHD7Q9P2D1 2997 aa17.52■□□□□ 0.39
CSNK1E-208ENST00000431611 LCHNA4D1U4 455 aa17.51■□□□□ 0.39
CSNK1E-208ENST00000431611 SGSM2O43147 1006 aa17.51■□□□□ 0.39
CSNK1E-208ENST00000431611 GRB10Q13322 594 aa17.51■□□□□ 0.39
CSNK1E-208ENST00000431611 HIC1Q14526 733 aa17.51■□□□□ 0.39
CSNK1E-208ENST00000431611 TCTN1Q2MV58 587 aa17.51■□□□□ 0.39
CSNK1E-208ENST00000431611 GNPTABQ3T906 1256 aa17.51■□□□□ 0.39
CSNK1E-208ENST00000431611 SPRED2Q7Z698 418 aa17.51■□□□□ 0.39
CSNK1E-208ENST00000431611 PIBF1Q8WXW3 757 aa17.51■□□□□ 0.39
CSNK1E-208ENST00000431611 GPKOWQ92917 476 aaPredicted RBP eCLIP17.51■□□□□ 0.392e-6■■□□□ 13
CSNK1E-208ENST00000431611 H3BRB1 525 aa17.5■□□□□ 0.39
CSNK1E-208ENST00000431611 GJB5O95377 273 aa17.5■□□□□ 0.39
CSNK1E-208ENST00000431611 BMP1P13497 986 aa17.5■□□□□ 0.39
CSNK1E-208ENST00000431611 MBTPS1Q14703 1052 aa17.5■□□□□ 0.39
CSNK1E-208ENST00000431611 SERINC5Q86VE9 423 aa17.5■□□□□ 0.39
CSNK1E-208ENST00000431611 IGDCC4Q8TDY8 1250 aa17.5■□□□□ 0.39
CSNK1E-208ENST00000431611 RAD9AQ99638 391 aa17.5■□□□□ 0.39
CSNK1E-208ENST00000431611 TUT1Q9H6E5 874 aaKnown RBP17.5■□□□□ 0.39
CSNK1E-208ENST00000431611 MYO9BQ13459 2157 aa17.5■□□□□ 0.39
CSNK1E-208ENST00000431611 KIAA1217Q5T5P2 1943 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 C17orf102A2RUQ5 167 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 RSPH10B2B2RC85 870 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 NOP56O00567 594 aaKnown RBP17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 LGR5O75473 907 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 STAM2O75886 525 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 RSPH10BP0C881 870 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 ICAM3P32942 547 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 THPOP40225 353 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 ANTXR2P58335 489 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 MRPS9P82933 396 aaKnown RBP17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 NEDD9Q14511 834 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 CTCFLQ8NI51 663 aaPredicted RBP17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 MAP4K1Q92918 833 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 ATP6V0A1Q93050 837 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 INPP4AQ96PE3 977 aaPredicted RBP17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 BCAS3Q9H6U6 928 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 COG5Q9UP83 839 aa17.49■□□□□ 0.39
CSNK1E-208ENST00000431611 FRMPD4Q14CM0 1322 aa17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 EMSYQ7Z589 1322 aa17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 SPATA31C2B4DYI2 1134 aa17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 LPXNO60711 386 aa17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 LGALS2P05162 132 aa17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 KCNQ1P51787 676 aa17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 FAM117BQ6P1L5 589 aa17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 METTL7BQ6UX53 244 aa17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 MB21D2Q8IYB1 491 aaPredicted RBP17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 DBF4BQ8NFT6 615 aa17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 NECAB3Q96P71 396 aaPredicted RBP17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 MAP3K14Q99558 947 aa17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 USP26Q9BXU7 913 aa17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 RTEL1Q9NZ71 1219 aa17.48■□□□□ 0.39
CSNK1E-208ENST00000431611 MYH6P13533 1939 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 TET1Q8NFU7 2136 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms