RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 KRT31Q15323 416 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 HYIQ5T013 277 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 CATSPER3Q86XQ3 398 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 ZNF280CQ8ND82 737 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 CLEC4DQ8WXI8 215 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 KLRG1Q96E93 195 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 NT5C3AQ9H0P0 336 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 SLC38A10Q9HBR0 1119 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 ADD3Q9UEY8 706 aaKnown RBP18.64■□□□□ 0.57
USHBP1-203ENST00000431146 PPP1R9AQ9ULJ8 1098 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 PARP14Q460N5 1801 aa18.63■□□□□ 0.57
USHBP1-203ENST00000431146 CACNB1Q02641 598 aaPredicted RBP18.63■□□□□ 0.57
USHBP1-203ENST00000431146 CYP4A11Q02928 519 aa18.63■□□□□ 0.57
USHBP1-203ENST00000431146 RAD51AP2Q09MP3 1159 aa18.63■□□□□ 0.57
USHBP1-203ENST00000431146 UNC13DQ70J99 1090 aa18.63■□□□□ 0.57
USHBP1-203ENST00000431146 TRIM47Q96LD4 638 aa18.63■□□□□ 0.57
USHBP1-203ENST00000431146 FAM20AQ96MK3 541 aa18.63■□□□□ 0.57
USHBP1-203ENST00000431146 VAV3Q9UKW4 847 aa18.63■□□□□ 0.57
USHBP1-203ENST00000431146 R3HCC1Q9Y3T6 440 aaKnown RBP18.63■□□□□ 0.57
USHBP1-203ENST00000431146 COL11A1P12107 1806 aaPredicted RBP18.62■□□□□ 0.57
USHBP1-203ENST00000431146 NPHP3-ACAD11A0A0J9YXS1 232 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 USP27XA6NNY8 438 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 KCNJ18B7U540 433 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 EML1O00423 815 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 USP14P54578 494 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 PSMC6P62333 389 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 KCNJ12Q14500 433 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 CNNM4Q6P4Q7 775 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 ATG4CQ96DT6 458 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 VPS16Q9H269 839 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 TAB2Q9NYJ8 693 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 CHMP2AO43633 222 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 PLA2G4BP0C869 781 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 SPATA31C1P0DKV0 1188 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 HSD17B4P51659 736 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 TCP11X2Q5H9J9 407 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 SPECC1LQ69YQ0 1117 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 TTI2Q6NXR4 508 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 IRF2BP1Q8IU81 584 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 GLIS3Q8NEA6 775 aa18.62■□□□□ 0.57
USHBP1-203ENST00000431146 SRRTQ9BXP5 876 aaKnown RBP18.62■□□□□ 0.57
USHBP1-203ENST00000431146 HAUS3Q68CZ6 603 aa18.61■□□□□ 0.57
USHBP1-203ENST00000431146 ANKRD40Q6AI12 368 aa18.61■□□□□ 0.57
USHBP1-203ENST00000431146 DNAJC19Q96DA6 116 aa18.61■□□□□ 0.57
USHBP1-203ENST00000431146 AS3MTQ9HBK9 375 aa18.61■□□□□ 0.57
USHBP1-203ENST00000431146 CTDP1Q9Y5B0 961 aaPredicted RBP18.61■□□□□ 0.57
USHBP1-203ENST00000431146 PVALEFA0A1B0GWK0 134 aa18.61■□□□□ 0.57
USHBP1-203ENST00000431146 ARP10275 920 aa18.61■□□□□ 0.57
USHBP1-203ENST00000431146 TBX2Q13207 712 aaPredicted RBP18.61■□□□□ 0.57
USHBP1-203ENST00000431146 CEP55Q53EZ4 464 aa18.61■□□□□ 0.57
USHBP1-203ENST00000431146 IL31RAQ8NI17 732 aa18.61■□□□□ 0.57
USHBP1-203ENST00000431146 P2RX5Q93086 422 aa18.61■□□□□ 0.57
USHBP1-203ENST00000431146 DHTKD1Q96HY7 919 aaPredicted RBP18.61■□□□□ 0.57
USHBP1-203ENST00000431146 CTAGE1Q96RT6 745 aa18.61■□□□□ 0.57
USHBP1-203ENST00000431146 DUSP9Q99956 384 aaKnown RBP18.61■□□□□ 0.57
USHBP1-203ENST00000431146 RGL1Q9NZL6 768 aa18.61■□□□□ 0.57
USHBP1-203ENST00000431146 ADM5C9JUS6 153 aa18.6■□□□□ 0.57
USHBP1-203ENST00000431146 ADKP55263 362 aaKnown RBP18.6■□□□□ 0.57
USHBP1-203ENST00000431146 SEMA3FQ13275 785 aa18.6■□□□□ 0.57
USHBP1-203ENST00000431146 LRRC41Q15345 812 aa18.6■□□□□ 0.57
USHBP1-203ENST00000431146 LRCH2Q5VUJ6 765 aa18.6■□□□□ 0.57
USHBP1-203ENST00000431146 GPBP1Q86WP2 473 aa18.6■□□□□ 0.57
USHBP1-203ENST00000431146 ERMNQ8TAM6 284 aa18.6■□□□□ 0.57
USHBP1-203ENST00000431146 EHMT1Q9H9B1 1298 aa18.6■□□□□ 0.57
USHBP1-203ENST00000431146 TRMT1Q9NXH9 659 aaKnown RBP18.6■□□□□ 0.57
USHBP1-203ENST00000431146 LIMA1Q9UHB6 759 aaKnown RBP18.6■□□□□ 0.57
USHBP1-203ENST00000431146 RLFQ13129 1914 aa18.6■□□□□ 0.57
USHBP1-203ENST00000431146 VWA5AO00534 786 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 N4BP3O15049 544 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 CCNE1P24864 410 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 RPA1P27694 616 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 COPB1P53618 953 aaKnown RBP18.59■□□□□ 0.57
USHBP1-203ENST00000431146 PABPC4Q13310 644 aaKnown RBP eCLIP18.59■□□□□ 0.57
USHBP1-203ENST00000431146 FILIP1LQ4L180 1135 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 CSGALNACT2Q8N6G5 542 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 C16orf45Q96MC5 204 aaPredicted RBP18.59■□□□□ 0.57
USHBP1-203ENST00000431146 PKD2L1Q9P0L9 805 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 TBC1D7Q9P0N9 293 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 ZBED4O75132 1171 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 USP2O75604 605 aaPredicted RBP18.59■□□□□ 0.57
USHBP1-203ENST00000431146 COASYQ13057 564 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 C9orf131Q5VYM1 1079 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 CEP135Q66GS9 1140 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 OTOP1Q7RTM1 612 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 PURBQ96QR8 312 aaKnown RBP18.59■□□□□ 0.57
USHBP1-203ENST00000431146 EIF2AK1Q9BQI3 630 aaKnown RBP18.59■□□□□ 0.57
USHBP1-203ENST00000431146 LRRC27Q9C0I9 530 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 SEMA6BQ9H3T3 888 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 PANK4Q9NVE7 773 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 RIPK3Q9Y572 518 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 PPP2R3BQ9Y5P8 575 aa18.59■□□□□ 0.57
USHBP1-203ENST00000431146 PSMD10O75832 226 aa18.58■□□□□ 0.57
USHBP1-203ENST00000431146 CYP11B2P19099 503 aa18.58■□□□□ 0.57
USHBP1-203ENST00000431146 SLC12A3P55017 1021 aa18.58■□□□□ 0.57
USHBP1-203ENST00000431146 SUPT20HL1Q3ZLR7 823 aa18.58■□□□□ 0.57
USHBP1-203ENST00000431146 CPLX3Q8WVH0 158 aa18.58■□□□□ 0.57
USHBP1-203ENST00000431146 TRERF1Q96PN7 1200 aa18.58■□□□□ 0.57
USHBP1-203ENST00000431146 FGFBP2Q9BYJ0 223 aa18.58■□□□□ 0.57
USHBP1-203ENST00000431146 ADARB2Q9NS39 739 aaKnown RBP18.58■□□□□ 0.57
USHBP1-203ENST00000431146 RBBP6Q7Z6E9 1792 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms