RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 GIMAP8Q8ND71 665 aaPredicted RBP12.47□□□□□ -0.41
CHD4-202ENST00000430771 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.47□□□□□ -0.41
CHD4-202ENST00000430771 ZDHHC9Q9Y397 364 aa12.47□□□□□ -0.41
CHD4-202ENST00000430771 DDX49Q9Y6V7 483 aaKnown RBP12.47□□□□□ -0.41
CHD4-202ENST00000430771 RBM47A0AV96 593 aaKnown RBP12.46□□□□□ -0.41
CHD4-202ENST00000430771 SLC37A4O43826 429 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 MARCH6O60337 910 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 MSCO60682 206 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 BAG4O95429 457 aaKnown RBP12.46□□□□□ -0.41
CHD4-202ENST00000430771 OR52Z1P0C646 297 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 ZNF865P0CJ78 1059 aaPredicted RBP12.46□□□□□ -0.41
CHD4-202ENST00000430771 TOB1P50616 345 aaPredicted RBP12.46□□□□□ -0.41
CHD4-202ENST00000430771 KRT85P78386 507 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 CACNB2Q08289 660 aaPredicted RBP12.46□□□□□ -0.41
CHD4-202ENST00000430771 NEDD9Q14511 834 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 SLFN12Q8IYM2 578 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 LENG9Q96B70 501 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 SDF4Q9BRK5 362 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 ZNF577Q9BSK1 485 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 WDR11Q9BZH6 1224 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 KCNH7Q9NS40 1196 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 POLR3EQ9NVU0 708 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 CFAP45Q9UL16 551 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 FAM184BQ9ULE4 1060 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 PCDHB6Q9Y5E3 794 aa12.46□□□□□ -0.41
CHD4-202ENST00000430771 NFASCO94856 1347 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 DOCK5Q9H7D0 1870 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 SPATA31C2B4DYI2 1134 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 WNT7AO00755 349 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 SEPT4O43236 478 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 RGS20O76081 388 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 TXNP10599 105 aaKnown RBP12.45□□□□□ -0.42
CHD4-202ENST00000430771 UBA1P22314 1058 aaKnown RBP12.45□□□□□ -0.42
CHD4-202ENST00000430771 ADCYAP1R1P41586 468 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 NBR1Q14596 966 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 SF3A1Q15459 793 aaKnown RBP12.45□□□□□ -0.42
CHD4-202ENST00000430771 ZNF174Q15697 407 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 TMEM266Q2M3C6 531 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 CCDC144BQ3MJ40 725 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 ANO1Q5XXA6 986 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 IQSEC1Q6DN90 963 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 TAPT1Q6NXT6 567 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 FAM173BQ6P4H8 233 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 CYP2W1Q8TAV3 490 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 SH3TC2Q8TF17 1288 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
CHD4-202ENST00000430771 FAM20AQ96MK3 541 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 USP28Q96RU2 1077 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 SENP7Q9BQF6 1050 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 TEKT3Q9BXF9 490 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 AGO4Q9HCK5 861 aaKnown RBP12.45□□□□□ -0.42
CHD4-202ENST00000430771 HMX1Q9NP08 348 aaPredicted RBP12.45□□□□□ -0.42
CHD4-202ENST00000430771 KCNMB3Q9NPA1 279 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 TBC1D22BQ9NU19 505 aa12.45□□□□□ -0.42
CHD4-202ENST00000430771 IPO5O00410 1097 aaKnown RBP12.44□□□□□ -0.42
CHD4-202ENST00000430771 MSH4O15457 936 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 EDIL3O43854 480 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 GAS7O60861 476 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 YEATS4O95619 227 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 GH1P01241 217 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 ARP10275 920 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 RARBP10826 455 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 KCNA2P16389 499 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 NCLP19338 710 aaKnown RBP12.44□□□□□ -0.42
CHD4-202ENST00000430771 CNGA1P29973 690 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 PRPHP41219 470 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 NASPP49321 788 aaPredicted RBP12.44□□□□□ -0.42
CHD4-202ENST00000430771 ATP2C1P98194 919 aaPredicted RBP12.44□□□□□ -0.42
CHD4-202ENST00000430771 TNFAIP2Q03169 654 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 TRIM32Q13049 653 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 SEMA3FQ13275 785 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 STK38Q15208 465 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 FOXD4L6Q3SYB3 417 aaPredicted RBP12.44□□□□□ -0.42
CHD4-202ENST00000430771 DUSP28Q4G0W2 176 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 PRAMEF19Q5SWL8 479 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 LRCH2Q5VUJ6 765 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 FOXD4L3Q6VB84 417 aaPredicted RBP12.44□□□□□ -0.42
CHD4-202ENST00000430771 ETNPPLQ8TBG4 499 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 SLC5A5Q92911 643 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 RIT2Q99578 217 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 RAB34Q9BZG1 259 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 JPH1Q9HDC5 661 aaPredicted RBP12.44□□□□□ -0.42
CHD4-202ENST00000430771 PDGFCQ9NRA1 345 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 PKD2L1Q9P0L9 805 aa12.44□□□□□ -0.42
CHD4-202ENST00000430771 DDX41Q9UJV9 622 aaKnown RBP12.44□□□□□ -0.42
CHD4-202ENST00000430771 MORC2Q9Y6X9 1032 aaPredicted RBP12.44□□□□□ -0.42
CHD4-202ENST00000430771 ARIH2O95376 493 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 GGPS1O95749 300 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 CCND3P30281 292 aaPredicted RBP12.43□□□□□ -0.42
CHD4-202ENST00000430771 KRT76Q01546 638 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 DNM1Q05193 864 aaKnown RBP12.43□□□□□ -0.42
CHD4-202ENST00000430771 PTGDRQ13258 359 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 ARL6IP4Q66PJ3 421 aaKnown RBP12.43□□□□□ -0.42
CHD4-202ENST00000430771 CCDC62Q6P9F0 684 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 METTL7BQ6UX53 244 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 TLK2Q86UE8 772 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 TRPV1Q8NER1 839 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 OR6J1Q8NGC5 347 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 KCNG4Q8TDN1 519 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 EMID1Q96A84 441 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms