RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 GKAP1Q5VSY0 366 aaPredicted RBP13.84□□□□□ -0.19
CPNE4-201ENST00000429747 SH2D3CQ8N5H7 860 aa13.84□□□□□ -0.19
CPNE4-201ENST00000429747 PLA2G4BP0C869 781 aa13.84□□□□□ -0.19
CPNE4-201ENST00000429747 TRAF1Q13077 416 aa13.84□□□□□ -0.19
CPNE4-201ENST00000429747 GRM4Q14833 912 aa13.84□□□□□ -0.19
CPNE4-201ENST00000429747 FAM83BQ5T0W9 1011 aa13.84□□□□□ -0.19
CPNE4-201ENST00000429747 MS4A14Q96JA4 679 aa13.84□□□□□ -0.19
CPNE4-201ENST00000429747 CCSER1Q9C0I3 900 aa13.84□□□□□ -0.19
CPNE4-201ENST00000429747 LACRTQ9GZZ8 138 aa13.84□□□□□ -0.19
CPNE4-201ENST00000429747 HPCAL4Q9UM19 191 aa13.84□□□□□ -0.19
CPNE4-201ENST00000429747 PSMD14O00487 310 aa13.83□□□□□ -0.19
CPNE4-201ENST00000429747 TDP2O95551 362 aa13.83□□□□□ -0.19
CPNE4-201ENST00000429747 ALKBH5Q6P6C2 394 aaKnown RBP13.83□□□□□ -0.19
CPNE4-201ENST00000429747 MRRFQ96E11 262 aaKnown RBP13.83□□□□□ -0.19
CPNE4-201ENST00000429747 TCRBV5S4A2TA0A5A2 114 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 RHOBTB3O94955 611 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 KRT5P13647 590 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 DHX9Q08211 1270 aaKnown RBP13.83□□□□□ -0.2
CPNE4-201ENST00000429747 MUM1L1Q5H9M0 696 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 MSANTD4Q8NCY6 345 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 HDAC9Q9UKV0 1011 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 C3P01024 1663 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 TARSL2A2RTX5 802 aaKnown RBP13.83□□□□□ -0.2
CPNE4-201ENST00000429747 GFPT2O94808 682 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 IFNAR2P48551 515 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 MDM2Q00987 491 aaPredicted RBP13.83□□□□□ -0.2
CPNE4-201ENST00000429747 SP4Q02446 784 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 ASPRV1Q53RT3 343 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 PSD3Q9NYI0 1048 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 SMIM22K7EJ46 135 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 AFPP02771 609 aaKnown RBP13.83□□□□□ -0.2
CPNE4-201ENST00000429747 PLEKP08567 350 aaPredicted RBP13.83□□□□□ -0.2
CPNE4-201ENST00000429747 PKN1Q16512 942 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 FMNL3Q8IVF7 1028 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 ANKRD42Q8N9B4 389 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 EHD2Q9NZN4 543 aa13.83□□□□□ -0.2
CPNE4-201ENST00000429747 NOVA2Q9UNW9 492 aaKnown RBP13.83□□□□□ -0.2
CPNE4-201ENST00000429747 RICTORQ6R327 1708 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 CALRP27797 417 aaKnown RBP13.82□□□□□ -0.2
CPNE4-201ENST00000429747 VPS41P49754 854 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 GIMAP8Q8ND71 665 aaPredicted RBP13.82□□□□□ -0.2
CPNE4-201ENST00000429747 CEP95Q96GE4 821 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 EFCC1Q9HA90 598 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 METTL14Q9HCE5 456 aaKnown RBP13.82□□□□□ -0.2
CPNE4-201ENST00000429747 PLAAQ9Y263 795 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 E9PMD0 336 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 SEC23AQ15436 765 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 SPATS2Q86XZ4 545 aaKnown RBP13.82□□□□□ -0.2
CPNE4-201ENST00000429747 NKIRAS1Q9NYS0 192 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 LEMD3Q9Y2U8 911 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 CCDC169A6NNP5 214 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 LRRN2O75325 713 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 PRPF6O94906 941 aaKnown RBP13.82□□□□□ -0.2
CPNE4-201ENST00000429747 PLTPP55058 493 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 PSMD2Q13200 908 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 FAM182BQ5T319 152 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 NT5DC1Q5TFE4 455 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 ICE2Q659A1 982 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 ADGRA1Q86SQ6 560 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 WHAMMQ8TF30 809 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 VIPAS39Q9H9C1 493 aa13.82□□□□□ -0.2
CPNE4-201ENST00000429747 BZW2Q9Y6E2 419 aaKnown RBP13.82□□□□□ -0.2
CPNE4-201ENST00000429747 PEAK1Q9H792 1746 aa13.81□□□□□ -0.2
CPNE4-201ENST00000429747 BCRP11274 1271 aa13.81□□□□□ -0.2
CPNE4-201ENST00000429747 USP37Q86T82 979 aa13.81□□□□□ -0.2
CPNE4-201ENST00000429747 FAM178BQ8IXR5 827 aa13.81□□□□□ -0.2
CPNE4-201ENST00000429747 GUF1Q8N442 669 aaKnown RBP13.81□□□□□ -0.2
CPNE4-201ENST00000429747 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.81□□□□□ -0.2
CPNE4-201ENST00000429747 PVALEFA0A1B0GWK0 134 aa13.81□□□□□ -0.2
CPNE4-201ENST00000429747 ZRSR2Q15696 482 aaKnown RBP13.81□□□□□ -0.2
CPNE4-201ENST00000429747 DOK7Q18PE1 504 aa13.81□□□□□ -0.2
CPNE4-201ENST00000429747 SLFN13Q68D06 897 aa13.81□□□□□ -0.2
CPNE4-201ENST00000429747 SLFN12Q8IYM2 578 aa13.81□□□□□ -0.2
CPNE4-201ENST00000429747 VEZTQ9HBM0 779 aa13.81□□□□□ -0.2
CPNE4-201ENST00000429747 GCNT4Q9P109 453 aa13.81□□□□□ -0.2
CPNE4-201ENST00000429747 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.81□□□□□ -0.2
CPNE4-201ENST00000429747 BUB1BO60566 1050 aaPredicted RBP13.81□□□□□ -0.2
CPNE4-201ENST00000429747 FGFR2P21802 821 aa13.81□□□□□ -0.2
CPNE4-201ENST00000429747 C12orf60Q5U649 245 aa13.81□□□□□ -0.2
CPNE4-201ENST00000429747 TRAPPC11Q7Z392 1133 aa13.81□□□□□ -0.2
CPNE4-201ENST00000429747 GAS7O60861 476 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 TTLL1O95922 423 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 COASYQ13057 564 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 CEP72Q9P209 647 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 SERPINB13Q9UIV8 391 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 PDS5AQ29RF7 1337 aaKnown RBP13.8□□□□□ -0.2
CPNE4-201ENST00000429747 JCADQ9P266 1359 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 FAM237AA0A1B0GTK4 181 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 CLEC4GQ6UXB4 293 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 RAD54LQ92698 747 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 RABGAP1Q9Y3P9 1069 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 DAAM1Q9Y4D1 1078 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 MON2Q7Z3U7 1717 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 KRT14P02533 472 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 ATP2B4P23634 1241 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 GUCY1A3Q02108 690 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 NKX1-1Q15270 411 aaPredicted RBP13.8□□□□□ -0.2
CPNE4-201ENST00000429747 GLE1Q53GS7 698 aaKnown RBP13.8□□□□□ -0.2
CPNE4-201ENST00000429747 GPATCH4Q5T3I0 446 aaKnown RBP13.8□□□□□ -0.2
CPNE4-201ENST00000429747 PDXDC2PQ6P474 469 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms