RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 FLRT1Q9NZU1 646 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 PFASO15067 1338 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 STAT3P40763 770 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 NR1I3Q14994 352 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 SLC4A8Q2Y0W8 1093 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 APOA5Q6Q788 366 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 RABGGTAQ92696 567 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 TMEM47Q9BQJ4 181 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 KATNBL1Q9H079 304 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 FBXO2Q9UK22 296 aaPredicted RBP10.78□□□□□ -0.68
NEDD1-203ENST00000429527 A0A1W2PPC1 479 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 ZNF213O14771 459 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 COBLO75128 1261 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 APPP05067 770 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 EN2P19622 333 aaPredicted RBP10.78□□□□□ -0.68
NEDD1-203ENST00000429527 CST5P28325 142 aaPredicted RBP10.78□□□□□ -0.68
NEDD1-203ENST00000429527 ZNF543Q08ER8 600 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 GPATCH4Q5T3I0 446 aaKnown RBP10.78□□□□□ -0.68
NEDD1-203ENST00000429527 CDKAL1Q5VV42 579 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 TC2NQ8N9U0 490 aa10.78□□□□□ -0.68
NEDD1-203ENST00000429527 RBM47A0AV96 593 aaKnown RBP10.77□□□□□ -0.68
NEDD1-203ENST00000429527 LRRC10BA6NIK2 292 aa10.77□□□□□ -0.68
NEDD1-203ENST00000429527 ICAM1P05362 532 aa10.77□□□□□ -0.68
NEDD1-203ENST00000429527 FCER1AP12319 257 aa10.77□□□□□ -0.68
NEDD1-203ENST00000429527 ADORA2AP29274 412 aa10.77□□□□□ -0.68
NEDD1-203ENST00000429527 STAT2P52630 851 aa10.77□□□□□ -0.68
NEDD1-203ENST00000429527 KANK3Q6NY19 840 aa10.77□□□□□ -0.68
NEDD1-203ENST00000429527 CCDC51Q96ER9 411 aa10.77□□□□□ -0.68
NEDD1-203ENST00000429527 SEZ6LQ9BYH1 1024 aa10.77□□□□□ -0.68
NEDD1-203ENST00000429527 MAP3K20Q9NYL2 800 aaKnown RBP10.77□□□□□ -0.68
NEDD1-203ENST00000429527 KIAA1217Q5T5P2 1943 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 KLF18A0A0U1RQI7 1052 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 PDHBP11177 359 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 SYKP43405 635 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 PLCB2Q00722 1185 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 ASPRV1Q53RT3 343 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 FAM133AQ8N9E0 248 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 TRPV1Q8NER1 839 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 WASF1Q92558 559 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 TSPY2A6NKD2 308 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 ACTN4O43707 911 aaKnown RBP10.77□□□□□ -0.69
NEDD1-203ENST00000429527 RANBP6O60518 1105 aaKnown RBP10.77□□□□□ -0.69
NEDD1-203ENST00000429527 TMC6Q7Z403 805 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 STK11IPQ8N1F8 1099 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 TSEN34Q9BSV6 310 aaKnown RBP10.77□□□□□ -0.69
NEDD1-203ENST00000429527 DACH1Q9UI36 760 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 Q9Y3F1 56 aa10.77□□□□□ -0.69
NEDD1-203ENST00000429527 GOLGA8BA8MQT2 603 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 TUBBP07437 444 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 FAM177A1Q8N128 213 aaPredicted RBP10.76□□□□□ -0.69
NEDD1-203ENST00000429527 MMP19Q99542 508 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 LRRC2Q9BYS8 371 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 DDX20Q9UHI6 824 aaKnown RBP10.76□□□□□ -0.69
NEDD1-203ENST00000429527 MMP1P03956 469 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 ELNP15502 786 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 CCT2P78371 535 aaKnown RBP10.76□□□□□ -0.69
NEDD1-203ENST00000429527 ZYXQ15942 572 aaKnown RBP10.76□□□□□ -0.69
NEDD1-203ENST00000429527 FAM47AQ5JRC9 791 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 KRT40Q6A162 431 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 MED15Q96RN5 788 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 ZSCAN10Q96SZ4 725 aaPredicted RBP10.76□□□□□ -0.69
NEDD1-203ENST00000429527 SDF4Q9BRK5 362 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 MYO1AQ9UBC5 1043 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 PPP2R2CQ9Y2T4 447 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 SRPRBQ9Y5M8 271 aaKnown RBP10.76□□□□□ -0.69
NEDD1-203ENST00000429527 FRMPD4Q14CM0 1322 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 DNM1LO00429 736 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 ZNF865P0CJ78 1059 aaPredicted RBP10.76□□□□□ -0.69
NEDD1-203ENST00000429527 BMP8BP34820 402 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 CUL4BQ13620 913 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 BRD3Q15059 726 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 SF3A1Q15459 793 aaKnown RBP10.76□□□□□ -0.69
NEDD1-203ENST00000429527 CYB5R4Q7L1T6 521 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 PAGR1Q9BTK6 254 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 HTATIP2Q9BUP3 242 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 FBXO28Q9NVF7 368 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 PRR12Q9ULL5 1215 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 IVNS1ABPQ9Y6Y0 642 aa10.76□□□□□ -0.69
NEDD1-203ENST00000429527 TNRC18O15417 2968 aaPredicted RBP10.75□□□□□ -0.69
NEDD1-203ENST00000429527 SEPT4O43236 478 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 PRKAR2AP13861 404 aaKnown RBP10.75□□□□□ -0.69
NEDD1-203ENST00000429527 TOB1P50616 345 aaPredicted RBP10.75□□□□□ -0.69
NEDD1-203ENST00000429527 CC2D1AQ6P1N0 951 aaPredicted RBP10.75□□□□□ -0.69
NEDD1-203ENST00000429527 ARGLU1Q9NWB6 273 aaPredicted RBP10.75□□□□□ -0.69
NEDD1-203ENST00000429527 CALCOCO1Q9P1Z2 691 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 PHF24Q9UPV7 400 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 CCDC151A5D8V7 595 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 POTEB2H3BUK9 544 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 EDNRBP24530 442 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 RILPL1Q5EBL4 403 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 SYDE2Q5VT97 1194 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 SPECC1LQ69YQ0 1117 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 SYT10Q6XYQ8 523 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 RASGRP2Q7LDG7 609 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 KRI1Q8N9T8 703 aaKnown RBP10.75□□□□□ -0.69
NEDD1-203ENST00000429527 LRRN4CLQ8ND94 238 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 TSPYL1Q9H0U9 437 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 ACAD9Q9H845 621 aa10.75□□□□□ -0.69
NEDD1-203ENST00000429527 PRDM1O75626 825 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms