RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 UBE2ZQ9H832 354 aaPredicted RBP21.34■■□□□ 1.01
UPK3BP1-201ENST00000428678 JMJD4Q9H9V9 463 aa21.34■■□□□ 1.01
UPK3BP1-201ENST00000428678 FAM86C2PA6NEL3 165 aa21.33■■□□□ 1.01
UPK3BP1-201ENST00000428678 MYCLP12524 364 aaPredicted RBP21.33■■□□□ 1.01
UPK3BP1-201ENST00000428678 RRP1P56182 461 aaKnown RBP21.33■■□□□ 1.01
UPK3BP1-201ENST00000428678 HDAC1Q13547 482 aaPredicted RBP21.33■■□□□ 1.01
UPK3BP1-201ENST00000428678 MBTPS1Q14703 1052 aa21.33■■□□□ 1.01
UPK3BP1-201ENST00000428678 TRAF7Q6Q0C0 670 aa21.33■■□□□ 1.01
UPK3BP1-201ENST00000428678 ANKS1AQ92625 1134 aa21.33■■□□□ 1.01
UPK3BP1-201ENST00000428678 LGR5O75473 907 aa21.32■■□□□ 1
UPK3BP1-201ENST00000428678 FBXO22Q8NEZ5 403 aa21.32■■□□□ 1
UPK3BP1-201ENST00000428678 SPATA33Q96N06 139 aa21.32■■□□□ 1
UPK3BP1-201ENST00000428678 AMNQ9BXJ7 453 aa21.32■■□□□ 1
UPK3BP1-201ENST00000428678 INSL6Q9Y581 213 aa21.32■■□□□ 1
UPK3BP1-201ENST00000428678 MICAL3Q7RTP6 2002 aa21.32■■□□□ 1
UPK3BP1-201ENST00000428678 EMSYQ7Z589 1322 aa21.31■■□□□ 1
UPK3BP1-201ENST00000428678 KCNA5P22460 613 aa21.31■■□□□ 1
UPK3BP1-201ENST00000428678 HOXD11P31277 338 aaPredicted RBP21.31■■□□□ 1
UPK3BP1-201ENST00000428678 THPOP40225 353 aa21.31■■□□□ 1
UPK3BP1-201ENST00000428678 HSD17B4P51659 736 aa21.31■■□□□ 1
UPK3BP1-201ENST00000428678 CWC27Q6UX04 472 aaKnown RBP21.31■■□□□ 1
UPK3BP1-201ENST00000428678 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.31■■□□□ 1
UPK3BP1-201ENST00000428678 MYOCDQ8IZQ8 938 aa21.31■■□□□ 1
UPK3BP1-201ENST00000428678 PDCD2LQ9BRP1 358 aa21.31■■□□□ 1
UPK3BP1-201ENST00000428678 C17orf80Q9BSJ5 609 aa21.31■■□□□ 1
UPK3BP1-201ENST00000428678 CD320Q9NPF0 282 aa21.31■■□□□ 1
UPK3BP1-201ENST00000428678 DIAPH3Q9NSV4 1193 aa21.31■■□□□ 1
UPK3BP1-201ENST00000428678 ZSWIM5Q9P217 1185 aa21.31■■□□□ 1
UPK3BP1-201ENST00000428678 ARIH1Q9Y4X5 557 aaPredicted RBP21.31■■□□□ 1
UPK3BP1-201ENST00000428678 OPLAHO14841 1288 aa21.3■■□□□ 1
UPK3BP1-201ENST00000428678 GPR37L1O60883 481 aa21.3■■□□□ 1
UPK3BP1-201ENST00000428678 PPFIA4O75335 1185 aa21.3■■□□□ 1
UPK3BP1-201ENST00000428678 GGPS1O95749 300 aa21.3■■□□□ 1
UPK3BP1-201ENST00000428678 AMHP03971 560 aa21.3■■□□□ 1
UPK3BP1-201ENST00000428678 HOXD8P13378 290 aaPredicted RBP21.3■■□□□ 1
UPK3BP1-201ENST00000428678 HIC1Q14526 733 aa21.3■■□□□ 1
UPK3BP1-201ENST00000428678 HSDL1Q3SXM5 330 aa21.3■■□□□ 1
UPK3BP1-201ENST00000428678 CELF3Q5SZQ8 465 aaKnown RBP21.3■■□□□ 1
UPK3BP1-201ENST00000428678 MYSM1Q5VVJ2 828 aa21.3■■□□□ 1
UPK3BP1-201ENST00000428678 UBAC1Q9BSL1 405 aa21.3■■□□□ 1
UPK3BP1-201ENST00000428678 C11orf16Q9NQ32 467 aa21.3■■□□□ 1
UPK3BP1-201ENST00000428678 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.29■■□□□ 1
UPK3BP1-201ENST00000428678 RSPH10B2B2RC85 870 aa21.29■■□□□ 1
UPK3BP1-201ENST00000428678 RGS20O76081 388 aa21.29■■□□□ 1
UPK3BP1-201ENST00000428678 RSPH10BP0C881 870 aa21.29■■□□□ 1
UPK3BP1-201ENST00000428678 LEXMQ3ZCV2 418 aa21.29■■□□□ 1
UPK3BP1-201ENST00000428678 KCNV1Q6PIU1 500 aa21.29■■□□□ 1
UPK3BP1-201ENST00000428678 SERINC5Q86VE9 423 aa21.29■■□□□ 1
UPK3BP1-201ENST00000428678 STAG2Q8N3U4 1231 aa21.29■■□□□ 1
UPK3BP1-201ENST00000428678 DBF4BQ8NFT6 615 aa21.29■■□□□ 1
UPK3BP1-201ENST00000428678 PI4K2BG5E9Z4 385 aa21.28■■□□□ 1
UPK3BP1-201ENST00000428678 UBA1P22314 1058 aaKnown RBP21.28■■□□□ 1
UPK3BP1-201ENST00000428678 HOXA13P31271 388 aaPredicted RBP21.28■■□□□ 1
UPK3BP1-201ENST00000428678 IMMTQ16891 758 aaKnown RBP21.28■■□□□ 1
UPK3BP1-201ENST00000428678 IFIT1BQ5T764 474 aaKnown RBP21.28■■□□□ 1
UPK3BP1-201ENST00000428678 B4GALNT3Q6L9W6 998 aa21.28■■□□□ 1
UPK3BP1-201ENST00000428678 IL31RAQ8NI17 732 aa21.28■■□□□ 1
UPK3BP1-201ENST00000428678 KRT23Q9C075 422 aa21.28■■□□□ 1
UPK3BP1-201ENST00000428678 PCDHA1Q9Y5I3 950 aa21.28■■□□□ 1
UPK3BP1-201ENST00000428678 BAZ2BQ9UIF8 2168 aaKnown RBP21.27■■□□□ 1
UPK3BP1-201ENST00000428678 MYO7AQ13402 2215 aa21.27■■□□□ 1
UPK3BP1-201ENST00000428678 C17orf102A2RUQ5 167 aa21.27■■□□□ 1
UPK3BP1-201ENST00000428678 KLRF2D3W0D1 207 aa21.27■■□□□ 1
UPK3BP1-201ENST00000428678 PPP1R11O60927 126 aaPredicted RBP21.27■■□□□ 1
UPK3BP1-201ENST00000428678 SSTR3P32745 418 aaPredicted RBP21.27■■□□□ 1
UPK3BP1-201ENST00000428678 SP2Q02086 613 aa21.27■■□□□ 1
UPK3BP1-201ENST00000428678 GHRHRQ02643 423 aa21.27■■□□□ 1
UPK3BP1-201ENST00000428678 PGM5Q15124 567 aa21.27■■□□□ 1
UPK3BP1-201ENST00000428678 STOX1Q6ZVD7 989 aa21.27■■□□□ 1
UPK3BP1-201ENST00000428678 VSIG10LQ86VR7 867 aa21.27■■□□□ 1
UPK3BP1-201ENST00000428678 FAM178BQ8IXR5 827 aa21.27■■□□□ 1
UPK3BP1-201ENST00000428678 GJD3Q8N144 294 aa21.27■■□□□ 1
UPK3BP1-201ENST00000428678 ATP6V0A1Q93050 837 aa21.27■■□□□ 1
UPK3BP1-201ENST00000428678 ZFP91Q96JP5 570 aaPredicted RBP21.27■■□□□ 1
UPK3BP1-201ENST00000428678 MLXIPQ9HAP2 919 aa21.27■■□□□ 1
UPK3BP1-201ENST00000428678 ZBTB5O15062 677 aa21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 CCND2P30279 289 aa21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 HTRA4P83105 476 aaPredicted RBP21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 PTPROQ16827 1216 aa21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 PLEKHG4Q58EX7 1191 aa21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 PTCRAQ6ISU1 281 aaPredicted RBP21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 GPKOWQ92917 476 aaPredicted RBP eCLIP21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 MRPL38Q96DV4 380 aaKnown RBP21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 YME1L1Q96TA2 773 aa21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 C16orf70Q9BSU1 422 aa21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 DSCC1Q9BVC3 393 aa21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 CNNM2Q9H8M5 875 aa21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 MAP3K20Q9NYL2 800 aaKnown RBP21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 CTNNA3Q9UI47 895 aa21.26■□□□□ 0.99
UPK3BP1-201ENST00000428678 H3BRB1 525 aa21.25■□□□□ 0.99
UPK3BP1-201ENST00000428678 TGFB3P10600 412 aa21.25■□□□□ 0.99
UPK3BP1-201ENST00000428678 IL9P15248 144 aa21.25■□□□□ 0.99
UPK3BP1-201ENST00000428678 MKRN4PQ13434 485 aaPredicted RBP21.25■□□□□ 0.99
UPK3BP1-201ENST00000428678 EPC2Q52LR7 807 aa21.25■□□□□ 0.99
UPK3BP1-201ENST00000428678 HOMER1Q86YM7 354 aa21.25■□□□□ 0.99
UPK3BP1-201ENST00000428678 SP7Q8TDD2 431 aaPredicted RBP21.25■□□□□ 0.99
UPK3BP1-201ENST00000428678 SEPT8Q92599 483 aa21.25■□□□□ 0.99
UPK3BP1-201ENST00000428678 MTMR8Q96EF0 704 aa21.25■□□□□ 0.99
UPK3BP1-201ENST00000428678 TUT1Q9H6E5 874 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms