RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 PPARDQ03181 441 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 CDC37Q16543 378 aaPredicted RBP11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 C4orf32Q8N8J7 132 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 BIN2Q9UBW5 565 aaPredicted RBP11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 KRIT1O00522 736 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 TNNI2P48788 182 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 SEC24CP53992 1094 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 LRRC41Q15345 812 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 ARHGAP27Q6ZUM4 889 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 RPAINQ86UA6 219 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 MYCBPAPQ8TBZ2 947 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 ATP6V0A2Q9Y487 856 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 ZNF263O14978 683 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 FSBPO95073 299 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 GBP2P32456 591 aaPredicted RBP11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 MIIPQ5JXC2 388 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 DAGLBQ8NCG7 672 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 ANKRD2Q9GZV1 360 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 PGRMC1O00264 195 aaKnown RBP11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 LDHBP07195 334 aaKnown RBP11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 VEGFAP15692 232 aaPredicted RBP11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 HERC4Q5GLZ8 1057 aaPredicted RBP11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 C10orf76Q5T2E6 689 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 KLHDC7AQ5VTJ3 777 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 ZNF572Q7Z3I7 529 aaPredicted RBP11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 HOOK3Q86VS8 718 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 MTMR8Q96EF0 704 aa11.82□□□□□ -0.52
ATP2C1-204ENST00000428331 USP17L8P0C7I0 530 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 SBK1Q52WX2 424 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 LRIG3Q6UXM1 1119 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 NELFCDQ8IXH7 590 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 PRPF38AQ8NAV1 312 aaKnown RBP11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 SEMA6BQ9H3T3 888 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 TFCP2L1Q9NZI6 479 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 JAG2Q9Y219 1238 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 BZW2Q9Y6E2 419 aaKnown RBP11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 ZC3H4Q9UPT8 1303 aaKnown RBP11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 MYH7P12883 1935 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 A0A1B0GUA9 196 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 ORC2Q13416 577 aaPredicted RBP11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 YTHDF3Q7Z739 585 aaKnown RBP11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 SYCE1Q8N0S2 351 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 IQCKQ8N0W5 287 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 ODF2LQ9ULJ1 636 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 PPP1R12BO60237 982 aaPredicted RBP11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 SLC8A1P32418 973 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 NAB2Q15742 525 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 TMC4Q7Z404 712 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 NSUN4Q96CB9 384 aaKnown RBP11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 GDF3Q9NR23 364 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 SIK3Q9Y2K2 1263 aa11.81□□□□□ -0.52
ATP2C1-204ENST00000428331 CCDC188H7C350 402 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 BRD2P25440 801 aaKnown RBP11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 PLCB4Q15147 1175 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 SLC18A3Q16572 532 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 FAM133AQ8N9E0 248 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 KAT2BQ92831 832 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 PANK4Q9NVE7 773 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 TBC1D7Q9P0N9 293 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 DISP2A7MBM2 1401 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 ATXN2Q99700 1313 aaKnown RBP11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 TLDC2A0PJX2 215 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 SMTNP53814 917 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 DDX12PQ92771 950 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 SYN2Q92777 582 aaPredicted RBP11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 NLRP3Q96P20 1036 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 NSRP1Q9H0G5 558 aaKnown RBP11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 VEZTQ9HBM0 779 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 NOVA2Q9UNW9 492 aaKnown RBP11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 GRIN2DO15399 1336 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 FGRP09769 529 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 HDLBPQ00341 1268 aaKnown RBP11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 SEPT2Q15019 361 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 CD302Q8IX05 232 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 MREGQ8N565 214 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 DYDC1Q8WWB3 177 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 CASKIN2Q8WXE0 1202 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 FAM84BQ96KN1 310 aaPredicted RBP11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 SELENOSQ9BQE4 189 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 CCDC113Q9H0I3 377 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 NT5C3AQ9H0P0 336 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 BSDC1Q9NW68 430 aaPredicted RBP11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 SAMD15Q9P1V8 674 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 PACSIN2Q9UNF0 486 aaPredicted RBP11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 RGPD5Q99666 1765 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 USP17L3A6NCW0 530 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 USP17L4A6NCW7 530 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 STXBP3O00186 592 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 KLRC1P26715 233 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 CALRP27797 417 aaKnown RBP11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 ADCY7P51828 1080 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 USP17L1Q7RTZ2 530 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 TAX1BP1Q86VP1 789 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 NAP1L3Q99457 506 aaPredicted RBP11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 RAB17Q9H0T7 212 aa11.8□□□□□ -0.52
ATP2C1-204ENST00000428331 MYMKA6NI61 221 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 RAD51CO43502 376 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 H2AFZP0C0S5 128 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 FAM153BP0C7A2 387 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms