RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 USP38Q8NB14 1042 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 MTMR8Q96EF0 704 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 TRIM47Q96LD4 638 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 UBAC1Q9BSL1 405 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 TRIM4Q9C037 500 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 KRT23Q9C075 422 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 FBXL5Q9UKA1 691 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 DENND2AQ9ULE3 1009 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 AMOTL2Q9Y2J4 779 aa17.65■□□□□ 0.42
C9orf3-206ENST00000428313 PRAMEF22A3QJZ6 481 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 SART1O43290 800 aaKnown RBP17.64■□□□□ 0.41
C9orf3-206ENST00000428313 LTKP29376 864 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 KLK7P49862 253 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 LRRC23Q53EV4 343 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-206ENST00000428313 FAM114A1Q8IWE2 563 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 UBLCP1Q8WVY7 318 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-206ENST00000428313 ATXN2LQ8WWM7 1075 aaKnown RBP17.64■□□□□ 0.41
C9orf3-206ENST00000428313 IP6K1Q92551 441 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 PRCCQ92733 491 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-206ENST00000428313 MYL10Q9BUA6 226 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 PUS7LQ9H0K6 701 aaKnown RBP17.64■□□□□ 0.41
C9orf3-206ENST00000428313 SALL4Q9UJQ4 1053 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 C2CD2Q9Y426 696 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 DCDC2CA8MYV0 355 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 UBOX5O94941 541 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 MMEP08473 750 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 PYGBP11216 843 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 MSH2P43246 934 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 RANBP1P43487 201 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 CNBD1Q8NA66 436 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 LPIN2Q92539 896 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 LTV1Q96GA3 475 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-206ENST00000428313 PCMTD1Q96MG8 357 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-206ENST00000428313 MYH6P13533 1939 aa17.64■□□□□ 0.41
C9orf3-206ENST00000428313 FER1L4A9Z1Z3 1794 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 B4E1Z4 1266 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 PSMA7O14818 248 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 ZNF530Q6P9A1 599 aaPredicted RBP17.63■□□□□ 0.41
C9orf3-206ENST00000428313 NKX2-3Q8TAU0 364 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 ABCF3Q9NUQ8 709 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 ATP6V1C1P21283 382 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 PMS1P54277 932 aaKnown RBP17.63■□□□□ 0.41
C9orf3-206ENST00000428313 COPS2P61201 443 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 BNIP1Q12981 228 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 MTA1Q13330 715 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 HHATQ5VTY9 493 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 TTI2Q6NXR4 508 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 HOOK3Q86VS8 718 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 C2CD5Q86YS7 1000 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 LRRC34Q8IZ02 419 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 KLHL29Q96CT2 875 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 PBKQ96KB5 322 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 MAPK8IP1Q9UQF2 711 aa17.63■□□□□ 0.41
C9orf3-206ENST00000428313 MYH1P12882 1939 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 MYH2Q9UKX2 1941 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 SPDYE5A6NIY4 337 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 F8VZ95 297 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 KRT16P08779 473 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 CHN1P15882 459 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 GBP1P32455 592 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 MMP13P45452 471 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 ATP2C1P98194 919 aaPredicted RBP17.62■□□□□ 0.41
C9orf3-206ENST00000428313 RTN1Q16799 776 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 AMOTQ4VCS5 1084 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 MEI1Q5TIA1 1274 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 ARMC3Q5W041 872 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 CRACR2BQ8N4Y2 399 aaPredicted RBP17.62■□□□□ 0.41
C9orf3-206ENST00000428313 ZNF513Q8N8E2 541 aaPredicted RBP17.62■□□□□ 0.41
C9orf3-206ENST00000428313 MDM1Q8TC05 714 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 TRAPPC9Q96Q05 1148 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 INCENPQ9NQS7 918 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 BCL9O00512 1426 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 ATRNO75882 1429 aa17.62■□□□□ 0.41
C9orf3-206ENST00000428313 HIP1RO75146 1068 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 OAS1P00973 400 aaKnown RBP17.61■□□□□ 0.41
C9orf3-206ENST00000428313 GNAZP19086 355 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 RCAN1P53805 252 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 CASP7P55210 303 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 FKBP4Q02790 459 aaKnown RBP eCLIP17.61■□□□□ 0.413e-6■■□□□ 13.3
C9orf3-206ENST00000428313 ADAM9Q13443 819 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 MPRIPQ6WCQ1 1025 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 ASRGL1Q7L266 308 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 TMC3Q7Z5M5 1100 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 XAGE3Q8WTP9 111 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 DHTKD1Q96HY7 919 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-206ENST00000428313 CHD4Q14839 1912 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 RBAK-RBAKDNI3L0D1 243 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 BAG3O95817 575 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 PPARDQ03181 441 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 ASTE1Q2TB18 679 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-206ENST00000428313 ELAC2Q9BQ52 826 aaKnown RBP17.61■□□□□ 0.41
C9orf3-206ENST00000428313 ARHGEF10LQ9HCE6 1279 aa17.61■□□□□ 0.41
C9orf3-206ENST00000428313 SSU72P8A0A1W2PR75 194 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 MIIPQ5JXC2 388 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 LMBR1LQ6UX01 489 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 KLHL7Q8IXQ5 586 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 FBF1Q8TES7 1133 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 MMTAG2Q9BU76 263 aaKnown RBP17.6■□□□□ 0.41
C9orf3-206ENST00000428313 A8MUI8 341 aa17.6■□□□□ 0.41
C9orf3-206ENST00000428313 ZSCAN9O15535 394 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms