RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 DNAH12Q6ZR08 3092 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 PLXNB2O15031 1838 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 COL11A1P12107 1806 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 CYP3A7-CYP3A51PA0A087WV96 503 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 A0A1W2PQ27 194 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 A0A1W2PQ64 194 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 A0A1W2PQD8 194 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 OPLAHO14841 1288 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 TRAK2O60296 914 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 CCNT1O60563 726 aaKnown RBP9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 CUTAO60888 179 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 CYP3A4P08684 503 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 COL6A1P12109 1028 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 CYP3A7P24462 503 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 CNGA1P29973 690 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 CYP2C19P33261 490 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 RGS2P41220 211 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 ATN1P54259 1190 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 CCNA1P78396 465 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 PTPAQ15257 358 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 ZNF174Q15697 407 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 UBE2SQ16763 222 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 LETM2Q2VYF4 491 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 RNF207Q6ZRF8 634 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 ZNF579Q8NAF0 562 aaKnown RBP9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 CLEC4DQ8WXI8 215 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 ANO3Q9BYT9 981 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 SENP6Q9GZR1 1112 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 SPATC1LQ9H0A9 340 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 MROH8Q9H579 483 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 RNF146Q9NTX7 359 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 BTBD7Q9P203 1132 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 PCDHA7Q9UN72 937 aa9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 SRPRBQ9Y5M8 271 aaKnown RBP9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 LAMA2P24043 3122 aaKnown RBP9.36□□□□□ -0.91
SMARCAL1-206ENST00000427645 UNC80Q8N2C7 3258 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 B4DLN1 442 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 ADAMTS3O15072 1205 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 PYGBP11216 843 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 CAPN2P17655 700 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 PTPREP23469 700 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 CMA1P23946 247 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 CIITAP33076 1130 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 MCM7P33993 719 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 ZNF76P36508 570 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 SREBF1P36956 1147 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 PRPHP41219 470 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 MAP2K5Q13163 448 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 PTGDRQ13258 359 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 KLHL40Q2TBA0 621 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 XRRA1Q6P2D8 792 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 FCHSD1Q86WN1 690 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 KRI1Q8N9T8 703 aaKnown RBP9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 SHCBP1Q8NEM2 672 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 NPLOC4Q8TAT6 608 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 TBC1D5Q92609 795 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 CHAMP1Q96JM3 812 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 FAM161BQ96MY7 647 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 APBA2Q99767 749 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 HOMER2Q9NSB8 354 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 MTMR10Q9NXD2 777 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 RIPK3Q9Y572 518 aa9.35□□□□□ -0.91
SMARCAL1-206ENST00000427645 FAM205CA6NFA0 338 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 NFIBO00712 420 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 TBX3O15119 743 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 STRNO43815 780 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 MARCH6O60337 910 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 NEMFO60524 1076 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 HOXA13P31271 388 aaPredicted RBP9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 RPS6P62753 249 aaKnown RBP9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 ARHGAP4P98171 946 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 ATP2C1P98194 919 aaPredicted RBP9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 BAATQ14032 418 aaPredicted RBP9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 LRIT3Q3SXY7 679 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 MUM1L1Q5H9M0 696 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 NSMFQ6X4W1 530 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 DTHD1Q6ZMT9 781 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 NCAPG2Q86XI2 1143 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 ANKRD35Q8N283 1001 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 C4orf32Q8N8J7 132 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 TRPV1Q8NER1 839 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 CRYGNQ8WXF5 182 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 SYAP1Q96A49 352 aaPredicted RBP9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 PGBD1Q96JS3 809 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 MPHOSPH6Q99547 160 aaKnown RBP9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 RAB34Q9BZG1 259 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 FTOQ9C0B1 505 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 FAM13BQ9NYF5 915 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 SMCHD1A6NHR9 2005 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 EYSQ5T1H1 3165 aa9.34□□□□□ -0.91
SMARCAL1-206ENST00000427645 LOC102724159A0A0B4J2E5 919 aa9.33□□□□□ -0.92
SMARCAL1-206ENST00000427645 MAFGO15525 162 aa9.33□□□□□ -0.92
SMARCAL1-206ENST00000427645 GADD45BO75293 160 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-206ENST00000427645 STAM2O75886 525 aa9.33□□□□□ -0.92
SMARCAL1-206ENST00000427645 LETM1O95202 739 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-206ENST00000427645 MARCKSP29966 332 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-206ENST00000427645 LONP1P36776 959 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-206ENST00000427645 PDIA5Q14554 519 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms