RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 CD2BP2O95400 341 aaKnown RBP28.72■■■□□ 2.19
HERPUD2-205ENST00000427455 UBA1P22314 1058 aaKnown RBP28.72■■■□□ 2.19
HERPUD2-205ENST00000427455 RASGRP4Q8TDF6 673 aa28.72■■■□□ 2.19
HERPUD2-205ENST00000427455 EMID1Q96A84 441 aaPredicted RBP28.72■■■□□ 2.19
HERPUD2-205ENST00000427455 UBIAD1Q9Y5Z9 338 aa28.72■■■□□ 2.19
HERPUD2-205ENST00000427455 SPATA31C2B4DYI2 1134 aa28.71■■■□□ 2.19
HERPUD2-205ENST00000427455 ARHGAP4P98171 946 aa28.71■■■□□ 2.19
HERPUD2-205ENST00000427455 NPY5RQ15761 445 aa28.71■■■□□ 2.19
HERPUD2-205ENST00000427455 BLIDQ8IZY5 108 aa28.71■■■□□ 2.19
HERPUD2-205ENST00000427455 CDHR1Q96JP9 859 aa28.71■■■□□ 2.19
HERPUD2-205ENST00000427455 GLT1D1Q96MS3 346 aa28.71■■■□□ 2.19
HERPUD2-205ENST00000427455 PHF20Q9BVI0 1012 aa28.71■■■□□ 2.19
HERPUD2-205ENST00000427455 KCNJ14Q9UNX9 436 aa28.71■■■□□ 2.19
HERPUD2-205ENST00000427455 A6NJR5 290 aa28.7■■■□□ 2.18
HERPUD2-205ENST00000427455 ITGB5P18084 799 aa28.7■■■□□ 2.18
HERPUD2-205ENST00000427455 ATN1P54259 1190 aaPredicted RBP28.7■■■□□ 2.18
HERPUD2-205ENST00000427455 SEMA3FQ13275 785 aa28.7■■■□□ 2.18
HERPUD2-205ENST00000427455 LAMC2Q13753 1193 aa28.7■■■□□ 2.18
HERPUD2-205ENST00000427455 LRRC26Q2I0M4 334 aa28.7■■■□□ 2.18
HERPUD2-205ENST00000427455 STARD7Q9NQZ5 370 aa28.7■■■□□ 2.18
HERPUD2-205ENST00000427455 CABYRO75952 493 aa28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 GGPS1O95749 300 aa28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 HMGN5P82970 282 aaKnown RBP28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 SP2Q02086 613 aa28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 MTMR1Q13613 665 aa28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 SNX17Q15036 470 aa28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 DHX37Q8IY37 1157 aaKnown RBP28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 CRYGNQ8WXF5 182 aa28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 DPF3Q92784 378 aa28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 TMX3Q96JJ7 454 aa28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 JADE2Q9NQC1 790 aa28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 POLR3EQ9NVU0 708 aa28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 DNAH12Q6ZR08 3092 aa28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 ELP1O95163 1332 aa28.69■■■□□ 2.18
HERPUD2-205ENST00000427455 M0R2N6 131 aa28.68■■■□□ 2.18
HERPUD2-205ENST00000427455 NEDD9Q14511 834 aa28.68■■■□□ 2.18
HERPUD2-205ENST00000427455 CEP55Q53EZ4 464 aa28.68■■■□□ 2.18
HERPUD2-205ENST00000427455 CELF3Q5SZQ8 465 aaKnown RBP28.68■■■□□ 2.18
HERPUD2-205ENST00000427455 CXCL17Q6UXB2 119 aa28.68■■■□□ 2.18
HERPUD2-205ENST00000427455 SLC39A5Q6ZMH5 540 aa28.68■■■□□ 2.18
HERPUD2-205ENST00000427455 AFG1LQ8WV93 481 aa28.68■■■□□ 2.18
HERPUD2-205ENST00000427455 SENP7Q9BQF6 1050 aa28.68■■■□□ 2.18
HERPUD2-205ENST00000427455 MXRA8Q9BRK3 442 aa28.68■■■□□ 2.18
HERPUD2-205ENST00000427455 GJB4Q9NTQ9 266 aa28.68■■■□□ 2.18
HERPUD2-205ENST00000427455 MYH7BA7E2Y1 1941 aa28.68■■■□□ 2.18
HERPUD2-205ENST00000427455 MAFGO15525 162 aa28.67■■■□□ 2.18
HERPUD2-205ENST00000427455 EVI5O60447 810 aa28.67■■■□□ 2.18
HERPUD2-205ENST00000427455 MMP3P08254 477 aa28.67■■■□□ 2.18
HERPUD2-205ENST00000427455 CYP3A4P08684 503 aa28.67■■■□□ 2.18
HERPUD2-205ENST00000427455 C1orf53Q5VUE5 145 aa28.67■■■□□ 2.18
HERPUD2-205ENST00000427455 MYSM1Q5VVJ2 828 aa28.67■■■□□ 2.18
HERPUD2-205ENST00000427455 PPTC7Q8NI37 304 aa28.67■■■□□ 2.18
HERPUD2-205ENST00000427455 KPNA6O60684 536 aa28.66■■■□□ 2.18
HERPUD2-205ENST00000427455 ZNF76P36508 570 aa28.66■■■□□ 2.18
HERPUD2-205ENST00000427455 PURAQ00577 322 aaKnown RBP28.66■■■□□ 2.18
HERPUD2-205ENST00000427455 GIMAP8Q8ND71 665 aaPredicted RBP28.66■■■□□ 2.18
HERPUD2-205ENST00000427455 MLXIPQ9HAP2 919 aa28.66■■■□□ 2.18
HERPUD2-205ENST00000427455 MYL3P08590 195 aa28.65■■■□□ 2.18
HERPUD2-205ENST00000427455 RTP1P59025 263 aa28.65■■■□□ 2.18
HERPUD2-205ENST00000427455 TRIM29Q14134 588 aa28.65■■■□□ 2.18
HERPUD2-205ENST00000427455 METTL7BQ6UX53 244 aa28.65■■■□□ 2.18
HERPUD2-205ENST00000427455 NIPA1Q7RTP0 329 aa28.65■■■□□ 2.18
HERPUD2-205ENST00000427455 KRT25Q7Z3Z0 450 aa28.65■■■□□ 2.18
HERPUD2-205ENST00000427455 SPATA33Q96N06 139 aa28.65■■■□□ 2.18
HERPUD2-205ENST00000427455 BRMS1Q9HCU9 246 aa28.65■■■□□ 2.18
HERPUD2-205ENST00000427455 A0A0U1RQG5 324 aaPredicted RBP28.64■■■□□ 2.18
HERPUD2-205ENST00000427455 MEIS1O00470 390 aa28.64■■■□□ 2.18
HERPUD2-205ENST00000427455 KCNA2P16389 499 aa28.64■■■□□ 2.18
HERPUD2-205ENST00000427455 CYP2W1Q8TAV3 490 aa28.64■■■□□ 2.18
HERPUD2-205ENST00000427455 VTI1AQ96AJ9 217 aa28.64■■■□□ 2.18
HERPUD2-205ENST00000427455 MTG1Q9BT17 334 aaPredicted RBP28.64■■■□□ 2.18
HERPUD2-205ENST00000427455 KCNH7Q9NS40 1196 aa28.64■■■□□ 2.18
HERPUD2-205ENST00000427455 NR2E3Q9Y5X4 410 aa28.64■■■□□ 2.18
HERPUD2-205ENST00000427455 FAM86B1E9PN63 330 aa28.63■■■□□ 2.17
HERPUD2-205ENST00000427455 SORBS3O60504 671 aa28.63■■■□□ 2.17
HERPUD2-205ENST00000427455 FAM86B2P0C5J1 330 aa28.63■■■□□ 2.17
HERPUD2-205ENST00000427455 KRT2P35908 639 aa28.63■■■□□ 2.17
HERPUD2-205ENST00000427455 DGKDQ16760 1214 aa28.63■■■□□ 2.17
HERPUD2-205ENST00000427455 HSDL1Q3SXM5 330 aa28.63■■■□□ 2.17
HERPUD2-205ENST00000427455 CYFIP1Q7L576 1253 aa28.63■■■□□ 2.17
HERPUD2-205ENST00000427455 C7orf61Q8IZ16 206 aa28.63■■■□□ 2.17
HERPUD2-205ENST00000427455 FAM184AQ8NB25 1140 aa28.63■■■□□ 2.17
HERPUD2-205ENST00000427455 TBCKQ8TEA7 893 aa28.63■■■□□ 2.17
HERPUD2-205ENST00000427455 ATP11BQ9Y2G3 1177 aa28.63■■■□□ 2.17
HERPUD2-205ENST00000427455 DOCK5Q9H7D0 1870 aa28.63■■■□□ 2.17
HERPUD2-205ENST00000427455 MMP1P03956 469 aa28.62■■■□□ 2.17
HERPUD2-205ENST00000427455 HOXD8P13378 290 aaPredicted RBP28.62■■■□□ 2.17
HERPUD2-205ENST00000427455 CIITAP33076 1130 aa28.62■■■□□ 2.17
HERPUD2-205ENST00000427455 FOSBP53539 338 aa28.62■■■□□ 2.17
HERPUD2-205ENST00000427455 SETQ01105 290 aaPredicted RBP28.62■■■□□ 2.17
HERPUD2-205ENST00000427455 NONOQ15233 471 aaKnown RBP eCLIP28.62■■■□□ 2.17
HERPUD2-205ENST00000427455 TRIM60Q495X7 471 aa28.62■■■□□ 2.17
HERPUD2-205ENST00000427455 SCN10AQ9Y5Y9 1956 aa28.61■■■□□ 2.17
HERPUD2-205ENST00000427455 IGLV3-22A0A075B6J6 115 aa28.61■■■□□ 2.17
HERPUD2-205ENST00000427455 CCDC194A0A1B0GVG4 234 aa28.61■■■□□ 2.17
HERPUD2-205ENST00000427455 NOP56O00567 594 aaKnown RBP28.61■■■□□ 2.17
HERPUD2-205ENST00000427455 ATP9AO75110 1047 aa28.61■■■□□ 2.17
HERPUD2-205ENST00000427455 USP11P51784 963 aa28.61■■■□□ 2.17
HERPUD2-205ENST00000427455 KRT40Q6A162 431 aa28.61■■■□□ 2.17
HERPUD2-205ENST00000427455 PLA2G4DQ86XP0 818 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms