RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 ARHGEF18Q6ZSZ5 1173 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 LRRC47Q8N1G4 583 aaKnown RBP13.59□□□□□ -0.23
HDLBP-214ENST00000427183 CENPKQ9BS16 269 aa13.59□□□□□ -0.23
HDLBP-214ENST00000427183 DDX25Q9UHL0 483 aaKnown RBP13.59□□□□□ -0.23
HDLBP-214ENST00000427183 NRXN1Q9ULB1 1477 aa13.58□□□□□ -0.23
HDLBP-214ENST00000427183 RNMTO43148 476 aaKnown RBP13.58□□□□□ -0.23
HDLBP-214ENST00000427183 MOCS3O95396 460 aa13.58□□□□□ -0.23
HDLBP-214ENST00000427183 RNASELQ05823 741 aaKnown RBP13.58□□□□□ -0.23
HDLBP-214ENST00000427183 DHX9Q08211 1270 aaKnown RBP13.58□□□□□ -0.23
HDLBP-214ENST00000427183 LARGE2Q8N3Y3 721 aa13.58□□□□□ -0.23
HDLBP-214ENST00000427183 CNOT6LQ96LI5 555 aaKnown RBP13.58□□□□□ -0.23
HDLBP-214ENST00000427183 RUNDC3BQ96NL0 473 aa13.58□□□□□ -0.23
HDLBP-214ENST00000427183 N4BP1O75113 896 aaKnown RBP13.58□□□□□ -0.24
HDLBP-214ENST00000427183 PDE6BP35913 854 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 APBA1Q02410 837 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 DPP8Q6V1X1 898 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-214ENST00000427183 KRT27Q7Z3Y8 459 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 MAP7D3Q8IWC1 876 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 ST13P4Q8IZP2 240 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-214ENST00000427183 SLC13A4Q9UKG4 626 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 KIDINS220Q9ULH0 1771 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 H7C1D1 291 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 PDHA1P08559 390 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 COPB1P53618 953 aaKnown RBP13.58□□□□□ -0.24
HDLBP-214ENST00000427183 PPARAQ07869 468 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 NOSTRINQ8IVI9 506 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 SPZ1Q9BXG8 430 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 TXLNGQ9NUQ3 528 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 CDC23Q9UJX2 597 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 CLIC4Q9Y696 253 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 SRGAP2BP0DMP2 458 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 MCF2P10911 925 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 DMP1Q13316 513 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-214ENST00000427183 TBCCQ15814 346 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 KIF19Q2TAC6 998 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 DARS2Q6PI48 645 aaKnown RBP13.58□□□□□ -0.24
HDLBP-214ENST00000427183 RSRC2Q7L4I2 434 aaKnown RBP13.58□□□□□ -0.24
HDLBP-214ENST00000427183 YIPF3Q9GZM5 350 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-214ENST00000427183 PDE8AO60658 829 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 POLGP54098 1239 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-214ENST00000427183 MRPS25P82663 173 aaKnown RBP13.58□□□□□ -0.24
HDLBP-214ENST00000427183 PTK2Q05397 1052 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 DEPDC1BQ8WUY9 529 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 NCLNQ969V3 563 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 SUCLG2Q96I99 432 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 SMYD3Q9H7B4 428 aa13.58□□□□□ -0.24
HDLBP-214ENST00000427183 PNMA6EA0A0J9YXQ4 647 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 MAFGO15525 162 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 DMTNQ08495 405 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 SMYD4Q8IYR2 804 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-214ENST00000427183 CAMSAP1Q5T5Y3 1602 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 KRT1P04264 644 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 PLS3P13797 630 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 SOX5P35711 763 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 RBL2Q08999 1139 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 TRIM42Q8IWZ5 723 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 SYMPKQ92797 1274 aaKnown RBP13.57□□□□□ -0.24
HDLBP-214ENST00000427183 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.57□□□□□ -0.241e-6■■■■□ 19.5
HDLBP-214ENST00000427183 EDC4Q6P2E9 1401 aaKnown RBP13.57□□□□□ -0.24
HDLBP-214ENST00000427183 A0A087WWV3 80 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 BNIP3LO60238 219 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 EPHB4P54760 987 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 SKOR1P84550 965 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-214ENST00000427183 KCNV2Q8TDN2 545 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 SLC38A10Q9HBR0 1119 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 JRKLQ9Y4A0 524 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 SYCE1LA8MT33 242 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 GSPT1P15170 499 aaKnown RBP13.57□□□□□ -0.24
HDLBP-214ENST00000427183 ADD1P35611 737 aaKnown RBP13.57□□□□□ -0.24
HDLBP-214ENST00000427183 SPATA1Q5VX52 437 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 RABGGTAQ92696 567 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 CCDC90BQ9GZT6 254 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 ATP8A2Q9NTI2 1148 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 METTL22Q9BUU2 404 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-214ENST00000427183 CALN1Q9BXU9 219 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 PALMDQ9NP74 551 aa13.57□□□□□ -0.24
HDLBP-214ENST00000427183 ECEL1O95672 775 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 OR52Z1P0C646 297 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 GYS2P54840 703 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 GNPTABQ3T906 1256 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 CADPS2Q86UW7 1296 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 A0A087WUV0 522 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-214ENST00000427183 PCYT1AP49585 367 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 POLA2Q14181 598 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 LRRC41Q15345 812 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 PLBD2Q8NHP8 589 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 USP40Q9NVE5 1235 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 HACD3Q9P035 362 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 SH3TC1Q8TE82 1336 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 PI4K2BG5E9Z4 385 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 WBP4O75554 376 aaKnown RBP13.56□□□□□ -0.24
HDLBP-214ENST00000427183 TLR3O15455 904 aaKnown RBP13.56□□□□□ -0.24
HDLBP-214ENST00000427183 UBXN2AP68543 259 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 LMNB2Q03252 620 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 OCA2Q04671 838 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 SDR42E1Q8WUS8 393 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 NUDCD1Q96RS6 583 aa13.56□□□□□ -0.24
HDLBP-214ENST00000427183 TUBGCP2Q9BSJ2 902 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms