RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 PPP2R2DQ66LE6 453 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 NOL8Q76FK4 1167 aaKnown RBP8.56□□□□□ -1.04
LINC01049-201ENST00000426840 DPP9Q86TI2 863 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 ANKRD35Q8N283 1001 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 FAM133AQ8N9E0 248 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 RAET1EQ8TD07 263 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 SOCS4Q8WXH5 440 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 PHKBQ93100 1093 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 DDX11Q96FC9 970 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 ZSCAN31Q96LW9 406 aaPredicted RBP8.56□□□□□ -1.04
LINC01049-201ENST00000426840 FGD4Q96M96 766 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 MAF1Q9H063 256 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 CWC22Q9HCG8 908 aaKnown RBP8.56□□□□□ -1.04
LINC01049-201ENST00000426840 CYP39A1Q9NYL5 469 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 FLRT1Q9NZU1 646 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 DIS3Q9Y2L1 958 aaKnown RBP8.56□□□□□ -1.04
LINC01049-201ENST00000426840 MRPL11Q9Y3B7 192 aaKnown RBP8.56□□□□□ -1.04
LINC01049-201ENST00000426840 FAM187AA6NFU0 413 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 PPFIA3O75145 1194 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 ELNP15502 786 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 GRK4P32298 578 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 SH3BP2P78314 561 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 PRR20EP86478 221 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 PRR20CP86479 221 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 PRR20DP86480 221 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 PRR20BP86481 221 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 PRR20AP86496 221 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 CNTN2Q02246 1040 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 TRAF1Q13077 416 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 PFKFB3Q16875 520 aaPredicted RBP8.55□□□□□ -1.04
LINC01049-201ENST00000426840 NSMFQ6X4W1 530 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 CYP4X1Q8N118 509 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 TRIB2Q92519 343 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 GTF3C6Q969F1 213 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 MAML3Q96JK9 1138 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 MRGPRX2Q96LB1 330 aa8.55□□□□□ -1.04
LINC01049-201ENST00000426840 PURBQ96QR8 312 aaKnown RBP8.55□□□□□ -1.04
LINC01049-201ENST00000426840 RNF26Q9BY78 433 aaPredicted RBP8.55□□□□□ -1.04
LINC01049-201ENST00000426840 ASTN1O14525 1302 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 TTC24A2A3L6 582 aaPredicted RBP8.54□□□□□ -1.04
LINC01049-201ENST00000426840 WNT7AO00755 349 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 CPLX1O14810 134 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 SCG2P13521 617 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 FDPSP14324 419 aaKnown RBP8.54□□□□□ -1.04
LINC01049-201ENST00000426840 HSD17B4P51659 736 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 RPS6P62753 249 aaKnown RBP8.54□□□□□ -1.04
LINC01049-201ENST00000426840 SSRP1Q08945 709 aaKnown RBP8.54□□□□□ -1.04
LINC01049-201ENST00000426840 OLFML2BQ68BL8 750 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 WWC2Q6AWC2 1192 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 SLC30A10Q6XR72 485 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 RNF207Q6ZRF8 634 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 MCF2L2Q86YR7 1114 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 TRMT44Q8IYL2 757 aaKnown RBP8.54□□□□□ -1.04
LINC01049-201ENST00000426840 SAMD3Q8N6K7 520 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 SYTL5Q8TDW5 730 aaPredicted RBP8.54□□□□□ -1.04
LINC01049-201ENST00000426840 SH3TC2Q8TF17 1288 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 GPKOWQ92917 476 aaPredicted RBP eCLIP8.54□□□□□ -1.04
LINC01049-201ENST00000426840 SHISA4Q96DD7 197 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 TAAR1Q96RJ0 339 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 APBA2Q99767 749 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 SLC26A6Q9BXS9 759 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 BARHL2Q9NY43 387 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 SLC5A4Q9NY91 659 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 MAP3K20Q9NYL2 800 aaKnown RBP8.54□□□□□ -1.04
LINC01049-201ENST00000426840 COL20A1Q9P218 1284 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 SEC63Q9UGP8 760 aaKnown RBP8.54□□□□□ -1.04
LINC01049-201ENST00000426840 ZNF236Q9UL36 1845 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 PFASO15067 1338 aa8.54□□□□□ -1.04
LINC01049-201ENST00000426840 PTPDC1A2A3K4 754 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 STXBP3O00186 592 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 MEIS2O14770 477 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 ADAMTS3O15072 1205 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 SNAI1O95863 264 aaPredicted RBP8.53□□□□□ -1.04
LINC01049-201ENST00000426840 CFBP00751 764 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 CALML3P27482 149 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 MCM2P49736 904 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 WNT7BP56706 349 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 CPLX2Q6PUV4 134 aaKnown RBP8.53□□□□□ -1.04
LINC01049-201ENST00000426840 MAMDC4Q6UXC1 1216 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 HEATR3Q7Z4Q2 680 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 CCDC83Q8IWF9 413 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 ZNF511Q8NB15 262 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 EHBP1Q8NDI1 1231 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 NSUN7Q8NE18 718 aaKnown RBP8.53□□□□□ -1.04
LINC01049-201ENST00000426840 MORC4Q8TE76 937 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 ARMC5Q96C12 935 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 TMX3Q96JJ7 454 aa8.53□□□□□ -1.04
LINC01049-201ENST00000426840 SH2B1Q9NRF2 756 aaPredicted RBP8.53□□□□□ -1.04
LINC01049-201ENST00000426840 PLXNA1Q9UIW2 1896 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 SMCO2A6NFE2 343 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 GCOM1H8Y6P7 765 aaPredicted RBP8.52□□□□□ -1.05
LINC01049-201ENST00000426840 hCG_1984214I3L0E3 225 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 PIK3CDO00329 1044 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 JAK2O60674 1132 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 CDKL5O76039 1030 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 DEXIO95424 95 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 HMGCRP04035 888 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 INHAP05111 366 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 POLR2MP0CAP2 368 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 HOXA13P31271 388 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms