RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 LRFN2Q9ULH4 789 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 MFAP3P55082 362 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 RNASE9P60153 205 aaKnown RBP15.2■□□□□ 0.02
RPL28-202ENST00000426763 FKBP3Q00688 224 aaKnown RBP15.2■□□□□ 0.02
RPL28-202ENST00000426763 CTTNQ14247 550 aaKnown RBP15.2■□□□□ 0.02
RPL28-202ENST00000426763 LRRC41Q15345 812 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 SGMS1Q86VZ5 419 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 GYS1P13807 737 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 QRICH1Q2TAL8 776 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 ADGRF4Q8IZF3 695 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 CACTINQ8WUQ7 758 aaKnown RBP15.2■□□□□ 0.02
RPL28-202ENST00000426763 FAM167AQ96KS9 214 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 NSRP1Q9H0G5 558 aaKnown RBP15.2■□□□□ 0.02
RPL28-202ENST00000426763 ZNF70Q9UC06 446 aaPredicted RBP15.2■□□□□ 0.02
RPL28-202ENST00000426763 UTP11Q9Y3A2 253 aaKnown RBP15.2■□□□□ 0.02
RPL28-202ENST00000426763 RPS12P25398 132 aaKnown RBP15.2■□□□□ 0.02
RPL28-202ENST00000426763 POLR2BP30876 1174 aaKnown RBP15.2■□□□□ 0.02
RPL28-202ENST00000426763 COL23A1Q86Y22 540 aaPredicted RBP15.2■□□□□ 0.02
RPL28-202ENST00000426763 PSMD14O00487 310 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 ORC2Q13416 577 aaPredicted RBP15.2■□□□□ 0.02
RPL28-202ENST00000426763 RNF187Q5TA31 235 aaPredicted RBP15.2■□□□□ 0.02
RPL28-202ENST00000426763 USP17L6PQ6QN14 398 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 ACAD9Q9H845 621 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 AMFRQ9UKV5 643 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 DEFB132Q7Z7B7 95 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 CAPN9O14815 690 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 TSGA10IPQ3SY00 556 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 CDC42EP5Q6NZY7 148 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 MRFAP1L1Q96HT8 127 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 EMILIN3Q9NT22 766 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 BARHL2Q9NY43 387 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 UBN2Q6ZU65 1347 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 ABCB4P21439 1286 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 RFX5P48382 616 aaPredicted RBP15.19■□□□□ 0.02
RPL28-202ENST00000426763 EVCP57679 992 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 TDRD7Q8NHU6 1098 aaKnown RBP15.19■□□□□ 0.02
RPL28-202ENST00000426763 TCP11Q8WWU5 503 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 FAM20AQ96MK3 541 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 ALDH8A1Q9H2A2 487 aaPredicted RBP15.19■□□□□ 0.02
RPL28-202ENST00000426763 DISC1Q9NRI5 854 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 ZBTB12Q9Y330 459 aaPredicted RBP15.19■□□□□ 0.02
RPL28-202ENST00000426763 STAM2O75886 525 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 AFPP02771 609 aaKnown RBP15.19■□□□□ 0.02
RPL28-202ENST00000426763 PTK2Q05397 1052 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 FAM81BQ96LP2 452 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 RPAP3Q9H6T3 665 aaPredicted RBP15.19■□□□□ 0.02
RPL28-202ENST00000426763 MAN1B1Q9UKM7 699 aa15.19■□□□□ 0.02
RPL28-202ENST00000426763 PRELPP51888 382 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 KRT76Q01546 638 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 GRAMD1CQ8IYS0 662 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 GABPB2Q8TAK5 448 aaPredicted RBP15.18■□□□□ 0.02
RPL28-202ENST00000426763 WDR64B1ANS9 1081 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 KDM6AO15550 1401 aaPredicted RBP15.18■□□□□ 0.02
RPL28-202ENST00000426763 EPSTI1Q96J88 318 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 MMP19Q99542 508 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 TLDC2A0PJX2 215 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 STAT3P40763 770 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 ARHGAP4P98171 946 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 CFAP221Q4G0U5 840 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 BHMT2Q9H2M3 363 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 SERPINA10Q9UK55 444 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 IKBKBO14920 756 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 MARK3P27448 753 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 NEDD9Q14511 834 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 HADHQ16836 314 aaKnown RBP15.18■□□□□ 0.02
RPL28-202ENST00000426763 RBM46Q8TBY0 533 aaKnown RBP15.18■□□□□ 0.02
RPL28-202ENST00000426763 FAM151AQ8WW52 585 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 FAM107BQ9H098 131 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 COL5A2P05997 1499 aaPredicted RBP15.18■□□□□ 0.02
RPL28-202ENST00000426763 ARHGEF28Q8N1W1 1705 aaKnown RBP15.18■□□□□ 0.02
RPL28-202ENST00000426763 NDC80O14777 642 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 MYL3P08590 195 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 FCER1AP12319 257 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 HOXD10P28358 340 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 UBLCP1Q8WVY7 318 aaPredicted RBP15.18■□□□□ 0.02
RPL28-202ENST00000426763 PAGE5Q96GU1 130 aa15.18■□□□□ 0.02
RPL28-202ENST00000426763 SMIM23A6NLE4 172 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 CDC27P30260 824 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 HMGCS2P54868 508 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 MAN2A1Q16706 1144 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 SND1Q7KZF4 910 aaKnown RBP eCLIP15.17■□□□□ 0.02
RPL28-202ENST00000426763 ASIC3Q9UHC3 531 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 GMPSP49915 693 aaPredicted RBP15.17■□□□□ 0.02
RPL28-202ENST00000426763 SLC10A5Q5PT55 438 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 ERO1AQ96HE7 468 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 SELENOSQ9BQE4 189 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 BZW2Q9Y6E2 419 aaKnown RBP15.17■□□□□ 0.02
RPL28-202ENST00000426763 KIF20BQ96Q89 1820 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 CLIC2O15247 247 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 GNAT1P11488 350 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 SURF1Q15526 300 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 SMYD4Q8IYR2 804 aaPredicted RBP15.17■□□□□ 0.02
RPL28-202ENST00000426763 KRT222Q8N1A0 295 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 TRIM58Q8NG06 486 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 ELP3Q9H9T3 547 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 RWDD2AQ9UIY3 292 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 TTLL4Q14679 1199 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 METTL23Q86XA0 190 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 NEK9Q8TD19 979 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 PCIF1Q9H4Z3 704 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms