RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 PCDHA8Q9Y5H6 950 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 SMCO2A6NFE2 343 aa15.64■□□□□ 0.09
SNX3-204ENST00000426155 DCDC2CA8MYV0 355 aa15.64■□□□□ 0.09
SNX3-204ENST00000426155 CABYRO75952 493 aa15.64■□□□□ 0.09
SNX3-204ENST00000426155 FXR1P51114 621 aaKnown RBP eCLIP15.64■□□□□ 0.09
SNX3-204ENST00000426155 ADCY7P51828 1080 aa15.64■□□□□ 0.09
SNX3-204ENST00000426155 PCNX4Q63HM2 1172 aa15.64■□□□□ 0.09
SNX3-204ENST00000426155 PPP1R18Q6NYC8 613 aa15.64■□□□□ 0.09
SNX3-204ENST00000426155 DHX37Q8IY37 1157 aaKnown RBP15.64■□□□□ 0.09
SNX3-204ENST00000426155 LBHD1Q9BQE6 289 aaPredicted RBP15.64■□□□□ 0.09
SNX3-204ENST00000426155 MTG1Q9BT17 334 aaPredicted RBP15.64■□□□□ 0.09
SNX3-204ENST00000426155 TANC1Q9C0D5 1861 aa15.64■□□□□ 0.09
SNX3-204ENST00000426155 TRPV6Q9H1D0 765 aa15.64■□□□□ 0.09
SNX3-204ENST00000426155 RIC8AQ9NPQ8 531 aa15.64■□□□□ 0.09
SNX3-204ENST00000426155 TBX21Q9UL17 535 aa15.64■□□□□ 0.09
SNX3-204ENST00000426155 TELO2Q9Y4R8 837 aa15.64■□□□□ 0.09
SNX3-204ENST00000426155 MROH7Q68CQ1 1323 aa15.64■□□□□ 0.09
SNX3-204ENST00000426155 SCN5AQ14524 2016 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 SPDYE3A6NKU9 549 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 hCG_1984214I3L0E3 225 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 KIAA0355O15063 1070 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 PRPF3O43395 683 aaKnown RBP15.63■□□□□ 0.09
SNX3-204ENST00000426155 B4GALT4O60513 344 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 CD4P01730 458 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 ZNF286BP0CG31 522 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 IFNAR1P17181 557 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 BMP8BP34820 402 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 AK2P54819 239 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 ANAPC15P60006 121 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 NBPF20Q3BBV1 942 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 HSDL1Q3SXM5 330 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 BRDTQ58F21 947 aaPredicted RBP15.63■□□□□ 0.09
SNX3-204ENST00000426155 MYSM1Q5VVJ2 828 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 ZNF713Q8N859 430 aaPredicted RBP15.63■□□□□ 0.09
SNX3-204ENST00000426155 PPP1R12CQ9BZL4 782 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 TRMT13Q9NUP7 481 aaKnown RBP15.63■□□□□ 0.09
SNX3-204ENST00000426155 TRIP12Q14669 1992 aaPredicted RBP15.63■□□□□ 0.09
SNX3-204ENST00000426155 UMODL1Q5DID0 1318 aa15.63■□□□□ 0.09
SNX3-204ENST00000426155 LAMA2P24043 3122 aaKnown RBP15.62■□□□□ 0.09
SNX3-204ENST00000426155 RBAK-RBAKDNI3L0D1 243 aa15.62■□□□□ 0.09
SNX3-204ENST00000426155 SOX1O00570 391 aaPredicted RBP15.62■□□□□ 0.09
SNX3-204ENST00000426155 LARGE1O95461 756 aa15.62■□□□□ 0.09
SNX3-204ENST00000426155 RAG1P15918 1043 aa15.62■□□□□ 0.09
SNX3-204ENST00000426155 ITGB5P18084 799 aa15.62■□□□□ 0.09
SNX3-204ENST00000426155 EPHB4P54760 987 aa15.62■□□□□ 0.09
SNX3-204ENST00000426155 FAM47CQ5HY64 1035 aa15.62■□□□□ 0.09
SNX3-204ENST00000426155 CELF3Q5SZQ8 465 aaKnown RBP15.62■□□□□ 0.09
SNX3-204ENST00000426155 PPTC7Q8NI37 304 aa15.62■□□□□ 0.09
SNX3-204ENST00000426155 KAT2BQ92831 832 aa15.62■□□□□ 0.09
SNX3-204ENST00000426155 EMID1Q96A84 441 aaPredicted RBP15.62■□□□□ 0.09
SNX3-204ENST00000426155 ZNF274Q96GC6 653 aaPredicted RBP15.62■□□□□ 0.09
SNX3-204ENST00000426155 SPATA33Q96N06 139 aa15.62■□□□□ 0.09
SNX3-204ENST00000426155 RNF26Q9BY78 433 aaPredicted RBP15.62■□□□□ 0.09
SNX3-204ENST00000426155 ANO3Q9BYT9 981 aa15.62■□□□□ 0.09
SNX3-204ENST00000426155 ALDH8A1Q9H2A2 487 aaPredicted RBP15.62■□□□□ 0.09
SNX3-204ENST00000426155 PKD2L1Q9P0L9 805 aa15.62■□□□□ 0.09
SNX3-204ENST00000426155 VPS54Q9P1Q0 977 aa15.62■□□□□ 0.09
SNX3-204ENST00000426155 TPCN1Q9ULQ1 816 aa15.62■□□□□ 0.09
SNX3-204ENST00000426155 SPATA31C2B4DYI2 1134 aa15.61■□□□□ 0.09
SNX3-204ENST00000426155 TLR3O15455 904 aaKnown RBP15.61■□□□□ 0.09
SNX3-204ENST00000426155 FIBPO43427 364 aa15.61■□□□□ 0.09
SNX3-204ENST00000426155 ICAM3P32942 547 aa15.61■□□□□ 0.09
SNX3-204ENST00000426155 CLK2P49760 499 aaKnown RBP15.61■□□□□ 0.09
SNX3-204ENST00000426155 SP4Q02446 784 aa15.61■□□□□ 0.09
SNX3-204ENST00000426155 SCRN1Q12765 414 aa15.61■□□□□ 0.09
SNX3-204ENST00000426155 LAMC2Q13753 1193 aa15.61■□□□□ 0.09
SNX3-204ENST00000426155 GNPTABQ3T906 1256 aa15.61■□□□□ 0.09
SNX3-204ENST00000426155 JAKMIP3Q5VZ66 844 aa15.61■□□□□ 0.09
SNX3-204ENST00000426155 KCNV1Q6PIU1 500 aa15.61■□□□□ 0.09
SNX3-204ENST00000426155 TDHQ8IZJ6 230 aa15.61■□□□□ 0.09
SNX3-204ENST00000426155 RASGRP4Q8TDF6 673 aa15.61■□□□□ 0.09
SNX3-204ENST00000426155 IL17RAQ96F46 866 aa15.61■□□□□ 0.09
SNX3-204ENST00000426155 AIFM3Q96NN9 605 aa15.61■□□□□ 0.09
SNX3-204ENST00000426155 ATP9AO75110 1047 aa15.6■□□□□ 0.09
SNX3-204ENST00000426155 STAM2O75886 525 aa15.6■□□□□ 0.09
SNX3-204ENST00000426155 CYP2C9P11712 490 aa15.6■□□□□ 0.09
SNX3-204ENST00000426155 AKAP17AQ02040 695 aaKnown RBP15.6■□□□□ 0.09
SNX3-204ENST00000426155 DGKDQ16760 1214 aa15.6■□□□□ 0.09
SNX3-204ENST00000426155 C9orf50Q5SZB4 431 aa15.6■□□□□ 0.09
SNX3-204ENST00000426155 CYFIP1Q7L576 1253 aa15.6■□□□□ 0.09
SNX3-204ENST00000426155 SPDYE1Q8NFV5 336 aaPredicted RBP15.6■□□□□ 0.09
SNX3-204ENST00000426155 CYP2W1Q8TAV3 490 aa15.6■□□□□ 0.09
SNX3-204ENST00000426155 MLXIPQ9HAP2 919 aa15.6■□□□□ 0.09
SNX3-204ENST00000426155 UBIAD1Q9Y5Z9 338 aa15.6■□□□□ 0.09
SNX3-204ENST00000426155 A0A1W2PPC1 479 aa15.59■□□□□ 0.09
SNX3-204ENST00000426155 CPLX1O14810 134 aa15.59■□□□□ 0.09
SNX3-204ENST00000426155 KPNA6O60684 536 aa15.59■□□□□ 0.09
SNX3-204ENST00000426155 TIMP1P01033 207 aa15.59■□□□□ 0.09
SNX3-204ENST00000426155 TGFB3P10600 412 aa15.59■□□□□ 0.09
SNX3-204ENST00000426155 CYP2C18P33260 490 aa15.59■□□□□ 0.09
SNX3-204ENST00000426155 XRRA1Q6P2D8 792 aa15.59■□□□□ 0.09
SNX3-204ENST00000426155 NLRX1Q86UT6 975 aa15.59■□□□□ 0.09
SNX3-204ENST00000426155 LRCH3Q96II8 777 aa15.59■□□□□ 0.09
SNX3-204ENST00000426155 ALG1Q9BT22 464 aa15.59■□□□□ 0.09
SNX3-204ENST00000426155 ZMYND12Q9H0C1 365 aa15.59■□□□□ 0.09
SNX3-204ENST00000426155 ESYT2A0FGR8 921 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 F2P00734 622 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 HOXD8P13378 290 aaPredicted RBP15.58■□□□□ 0.08
SNX3-204ENST00000426155 KCNA2P16389 499 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 PSEN2P49810 448 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms