RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 NYXQ9GZU5 481 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 FAM169AQ9Y6X4 670 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 MYH13Q9UKX3 1938 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 HEXIM1O94992 359 aaKnown RBP8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 FAM153BP0C7A2 387 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 NFIXQ14938 502 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 FAM153CQ494X1 144 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 FAM83BQ5T0W9 1011 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 EMBQ6PCB8 327 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 CLEC10AQ8IUN9 316 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 KLHL7Q8IXQ5 586 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 IFT20Q8IY31 132 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 IQCDQ96DY2 449 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 ZIM3Q96PE6 472 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 ADAMTS1Q9UHI8 967 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 FAM153AQ9UHL3 310 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 TAF1P21675 1872 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 ANKRD36CQ5JPF3 1778 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 GNPATO15228 680 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 NOP2P46087 812 aaKnown RBP8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 ADCY7P51828 1080 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 LRRC63Q05C16 580 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 NNTQ13423 1086 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 TRADDQ15628 312 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 KIAA0753Q2KHM9 967 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 TTMPQ5BVD1 217 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 PROCA1Q8NCQ7 364 aaPredicted RBP8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 NEDD1Q8NHV4 660 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 MTMR9Q96QG7 549 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 BMP2KQ9NSY1 1161 aaPredicted RBP8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 STK17AQ9UEE5 414 aa8.31□□□□□ -1.08
SMARCC1-202ENST00000425518 PLCH1Q4KWH8 1693 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 A0A087WUV0 522 aaPredicted RBP8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 NDUFAB1O14561 156 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 KLRC1P26715 233 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 EPS15P42566 896 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 FKBP3Q00688 224 aaKnown RBP8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 PICALMQ13492 652 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 ECM1Q16610 540 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 LRRC55Q6ZSA7 311 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 PTF1AQ7RTS3 328 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 DNAAF5Q86Y56 855 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 EFCAB13Q8IY85 973 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 CDCA7Q9BWT1 371 aaPredicted RBP8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 EFCC1Q9HA90 598 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 PANK4Q9NVE7 773 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 COL4A3BPQ9Y5P4 624 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 ARAP2Q8WZ64 1704 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 NPHP3-ACAD11A0A0J9YXS1 232 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 EIF3HO15372 352 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 KRT18P05783 430 aaKnown RBP8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 HLTFQ14527 1009 aaKnown RBP eCLIP8.3□□□□□ -1.081e-9■■□□□ 11.6
SMARCC1-202ENST00000425518 HERC4Q5GLZ8 1057 aaPredicted RBP8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 FAM26FQ5R3K3 315 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 MEX3CQ5U5Q3 659 aaKnown RBP8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 ALS2CLQ60I27 953 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 HGSNATQ68CP4 663 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 TADA2BQ86TJ2 420 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 FAM133AQ8N9E0 248 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 PACSIN1Q9BY11 444 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 FAM170AA1A519 330 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 TLR2O60603 784 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 SHOX2O60902 331 aaPredicted RBP8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 LCA5LO95447 670 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 KLHL30Q0D2K2 578 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 MAATS1Q7Z4T9 603 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 FGFBP2Q9BYJ0 223 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 FAM107BQ9H098 131 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 GOLPH3Q9H4A6 298 aa8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 LUC7LQ9NQ29 371 aaKnown RBP8.3□□□□□ -1.08
SMARCC1-202ENST00000425518 SPATA31A1Q5TZJ5 1347 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 A0A087X0T9 212 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 E9PMD0 336 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 PJA2O43164 708 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 ERLIN2O94905 339 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 FAM228BP0C875 321 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 GTF2A1P52655 376 aaPredicted RBP8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 PPP4CP60510 307 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 ITIH3Q06033 890 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 COASYQ13057 564 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 ASTE1Q2TB18 679 aaPredicted RBP8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 ZNF804AQ7Z570 1209 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 TAF4BQ92750 862 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 RIC8AQ9NPQ8 531 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 KIAA1024Q9UPX6 916 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 MYH10P35580 1976 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 SSU72P8A0A1W2PR75 194 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 SERPING1P05155 500 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 TM4SF1P30408 202 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 SLC16A2P36021 539 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 FXR2P51116 673 aaKnown RBP eCLIP8.29□□□□□ -1.084e-7■■■□□ 15.8
SMARCC1-202ENST00000425518 PAK2Q13177 524 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 GBP6Q6ZN66 633 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 RNF10Q8N5U6 811 aaKnown RBP8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 DDX25Q9UHL0 483 aaKnown RBP8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 PCDHA12Q9UN75 941 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 KCNK3O14649 394 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 NOL4O94818 638 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms