RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 GJB5O95377 273 aa20.46■□□□□ 0.87
HDAC7-208ENST00000425451 AAMPQ13685 434 aa20.46■□□□□ 0.87
HDAC7-208ENST00000425451 SEC23AQ15436 765 aa20.46■□□□□ 0.87
HDAC7-208ENST00000425451 ZNF618Q5T7W0 954 aa20.46■□□□□ 0.87
HDAC7-208ENST00000425451 MYSM1Q5VVJ2 828 aa20.46■□□□□ 0.87
HDAC7-208ENST00000425451 DHX37Q8IY37 1157 aaKnown RBP20.46■□□□□ 0.87
HDAC7-208ENST00000425451 HLA-CQ95604 372 aa20.46■□□□□ 0.87
HDAC7-208ENST00000425451 KATNAL1Q9BW62 490 aa20.46■□□□□ 0.87
HDAC7-208ENST00000425451 KRT23Q9C075 422 aa20.46■□□□□ 0.87
HDAC7-208ENST00000425451 IL25Q9H293 177 aa20.46■□□□□ 0.87
HDAC7-208ENST00000425451 KLRF2D3W0D1 207 aa20.45■□□□□ 0.86
HDAC7-208ENST00000425451 PPFIA4O75335 1185 aa20.45■□□□□ 0.86
HDAC7-208ENST00000425451 SP2Q02086 613 aa20.45■□□□□ 0.86
HDAC7-208ENST00000425451 SLC35G1Q2M3R5 365 aa20.45■□□□□ 0.86
HDAC7-208ENST00000425451 HSDL1Q3SXM5 330 aa20.45■□□□□ 0.86
HDAC7-208ENST00000425451 VSIG10LQ86VR7 867 aa20.45■□□□□ 0.86
HDAC7-208ENST00000425451 UBAC1Q9BSL1 405 aa20.45■□□□□ 0.86
HDAC7-208ENST00000425451 ZBED2Q9BTP6 218 aa20.45■□□□□ 0.86
HDAC7-208ENST00000425451 CNNM2Q9H8M5 875 aa20.45■□□□□ 0.86
HDAC7-208ENST00000425451 CTNNA3Q9UI47 895 aa20.45■□□□□ 0.86
HDAC7-208ENST00000425451 MAD2L2Q9UI95 211 aa20.45■□□□□ 0.86
HDAC7-208ENST00000425451 PALM3A6NDB9 673 aaPredicted RBP20.44■□□□□ 0.86
HDAC7-208ENST00000425451 HIP1O00291 1037 aa20.44■□□□□ 0.86
HDAC7-208ENST00000425451 MYCLP12524 364 aaPredicted RBP20.44■□□□□ 0.86
HDAC7-208ENST00000425451 CELF3Q5SZQ8 465 aaKnown RBP20.44■□□□□ 0.86
HDAC7-208ENST00000425451 IFIT1BQ5T764 474 aaKnown RBP20.44■□□□□ 0.86
HDAC7-208ENST00000425451 CYB5R4Q7L1T6 521 aa20.44■□□□□ 0.86
HDAC7-208ENST00000425451 IL31RAQ8NI17 732 aa20.44■□□□□ 0.86
HDAC7-208ENST00000425451 GDPD5Q8WTR4 605 aa20.44■□□□□ 0.86
HDAC7-208ENST00000425451 RAD9AQ99638 391 aa20.44■□□□□ 0.86
HDAC7-208ENST00000425451 SUGCTQ9HAC7 445 aa20.44■□□□□ 0.86
HDAC7-208ENST00000425451 MAP3K20Q9NYL2 800 aaKnown RBP20.44■□□□□ 0.86
HDAC7-208ENST00000425451 LMCD1Q9NZU5 365 aa20.44■□□□□ 0.86
HDAC7-208ENST00000425451 MYH7BA7E2Y1 1941 aa20.44■□□□□ 0.86
HDAC7-208ENST00000425451 ZBTB5O15062 677 aa20.43■□□□□ 0.86
HDAC7-208ENST00000425451 SORBS3O60504 671 aa20.43■□□□□ 0.86
HDAC7-208ENST00000425451 HOXA13P31271 388 aaPredicted RBP20.43■□□□□ 0.86
HDAC7-208ENST00000425451 ERVK-21P61565 698 aa20.43■□□□□ 0.86
HDAC7-208ENST00000425451 MKRN4PQ13434 485 aaPredicted RBP20.43■□□□□ 0.86
HDAC7-208ENST00000425451 IKBKEQ14164 716 aa20.43■□□□□ 0.86
HDAC7-208ENST00000425451 PGM5Q15124 567 aa20.43■□□□□ 0.86
HDAC7-208ENST00000425451 C16orf70Q9BSU1 422 aa20.43■□□□□ 0.86
HDAC7-208ENST00000425451 C1QTNF1Q9BXJ1 281 aa20.43■□□□□ 0.86
HDAC7-208ENST00000425451 PCDHA1Q9Y5I3 950 aa20.43■□□□□ 0.86
HDAC7-208ENST00000425451 LINC01553A4QN01 128 aa20.42■□□□□ 0.86
HDAC7-208ENST00000425451 EFCAB14O75071 495 aa20.42■□□□□ 0.86
HDAC7-208ENST00000425451 GGPS1O95749 300 aa20.42■□□□□ 0.86
HDAC7-208ENST00000425451 KCNV1Q6PIU1 500 aa20.42■□□□□ 0.86
HDAC7-208ENST00000425451 SERINC5Q86VE9 423 aa20.42■□□□□ 0.86
HDAC7-208ENST00000425451 GPKOWQ92917 476 aaPredicted RBP eCLIP20.42■□□□□ 0.86
HDAC7-208ENST00000425451 ZFP91Q96JP5 570 aaPredicted RBP20.42■□□□□ 0.86
HDAC7-208ENST00000425451 SPATA33Q96N06 139 aa20.42■□□□□ 0.86
HDAC7-208ENST00000425451 EPHX3Q9H6B9 360 aa20.42■□□□□ 0.86
HDAC7-208ENST00000425451 BCAS3Q9H6U6 928 aa20.42■□□□□ 0.86
HDAC7-208ENST00000425451 MTUS1Q9ULD2 1270 aa20.42■□□□□ 0.86
HDAC7-208ENST00000425451 LGR5O75473 907 aa20.41■□□□□ 0.86
HDAC7-208ENST00000425451 UBA1P22314 1058 aaKnown RBP20.41■□□□□ 0.86
HDAC7-208ENST00000425451 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.41■□□□□ 0.86
HDAC7-208ENST00000425451 SAMD3Q8N6K7 520 aa20.41■□□□□ 0.86
HDAC7-208ENST00000425451 TGS1Q96RS0 853 aaKnown RBP20.41■□□□□ 0.86
HDAC7-208ENST00000425451 BRWD1Q9NSI6 2320 aa20.41■□□□□ 0.86
HDAC7-208ENST00000425451 TGFB3P10600 412 aa20.4■□□□□ 0.86
HDAC7-208ENST00000425451 HOXC8P31273 242 aa20.4■□□□□ 0.86
HDAC7-208ENST00000425451 FAM117BQ6P1L5 589 aa20.4■□□□□ 0.86
HDAC7-208ENST00000425451 DBF4BQ8NFT6 615 aa20.4■□□□□ 0.86
HDAC7-208ENST00000425451 RIOX1Q9H6W3 641 aa20.4■□□□□ 0.86
HDAC7-208ENST00000425451 CYTH3O43739 400 aa20.39■□□□□ 0.85
HDAC7-208ENST00000425451 HOMER1Q86YM7 354 aa20.39■□□□□ 0.85
HDAC7-208ENST00000425451 KHSRPQ92945 711 aaKnown RBP eCLIP20.39■□□□□ 0.85
HDAC7-208ENST00000425451 PIGSQ96S52 555 aa20.39■□□□□ 0.85
HDAC7-208ENST00000425451 SENP2Q9HC62 589 aa20.39■□□□□ 0.85
HDAC7-208ENST00000425451 EMSYQ7Z589 1322 aa20.38■□□□□ 0.85
HDAC7-208ENST00000425451 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.38■□□□□ 0.85
HDAC7-208ENST00000425451 RSPH10B2B2RC85 870 aa20.38■□□□□ 0.85
HDAC7-208ENST00000425451 GCOM1H8Y6P7 765 aaPredicted RBP20.38■□□□□ 0.85
HDAC7-208ENST00000425451 RSPH10BP0C881 870 aa20.38■□□□□ 0.85
HDAC7-208ENST00000425451 POLR2MP0CAP2 368 aa20.38■□□□□ 0.85
HDAC7-208ENST00000425451 CCND2P30279 289 aa20.38■□□□□ 0.85
HDAC7-208ENST00000425451 THPOP40225 353 aa20.38■□□□□ 0.85
HDAC7-208ENST00000425451 GRM4Q14833 912 aa20.38■□□□□ 0.85
HDAC7-208ENST00000425451 EXOC6Q8TAG9 804 aa20.38■□□□□ 0.85
HDAC7-208ENST00000425451 OSBPL7Q9BZF2 842 aa20.38■□□□□ 0.85
HDAC7-208ENST00000425451 INSL6Q9Y581 213 aa20.38■□□□□ 0.85
HDAC7-208ENST00000425451 SIP14410 1827 aa20.37■□□□□ 0.85
HDAC7-208ENST00000425451 H3BRB1 525 aa20.37■□□□□ 0.85
HDAC7-208ENST00000425451 PLA2G5P39877 138 aa20.37■□□□□ 0.85
HDAC7-208ENST00000425451 MRPS9P82933 396 aaKnown RBP20.37■□□□□ 0.85
HDAC7-208ENST00000425451 HTRA4P83105 476 aaPredicted RBP20.37■□□□□ 0.85
HDAC7-208ENST00000425451 PLEKHG4Q58EX7 1191 aa20.37■□□□□ 0.85
HDAC7-208ENST00000425451 FCHSD1Q86WN1 690 aa20.37■□□□□ 0.85
HDAC7-208ENST00000425451 SP7Q8TDD2 431 aaPredicted RBP20.37■□□□□ 0.85
HDAC7-208ENST00000425451 ATP6V0A1Q93050 837 aa20.37■□□□□ 0.85
HDAC7-208ENST00000425451 C17orf80Q9BSJ5 609 aa20.37■□□□□ 0.85
HDAC7-208ENST00000425451 LRFN3Q9BTN0 628 aa20.37■□□□□ 0.85
HDAC7-208ENST00000425451 TUT1Q9H6E5 874 aaKnown RBP20.37■□□□□ 0.85
HDAC7-208ENST00000425451 MLXIPQ9HAP2 919 aa20.37■□□□□ 0.85
HDAC7-208ENST00000425451 CD320Q9NPF0 282 aa20.37■□□□□ 0.85
HDAC7-208ENST00000425451 C17orf102A2RUQ5 167 aa20.36■□□□□ 0.85
HDAC7-208ENST00000425451 TREHO43280 583 aa20.36■□□□□ 0.85
HDAC7-208ENST00000425451 LGALS2P05162 132 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms