RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 TTBK2Q6IQ55 1244 aa11.89□□□□□ -0.51
CUX1-205ENST00000425244 DYMQ7RTS9 669 aa11.89□□□□□ -0.51
CUX1-205ENST00000425244 GPIHBP1Q8IV16 184 aa11.89□□□□□ -0.51
CUX1-205ENST00000425244 UIMC1Q96RL1 719 aa11.89□□□□□ -0.51
CUX1-205ENST00000425244 CUEDC2Q9H467 287 aa11.89□□□□□ -0.51
CUX1-205ENST00000425244 AGPAT5Q9NUQ2 364 aa11.89□□□□□ -0.51
CUX1-205ENST00000425244 REXO2Q9Y3B8 237 aaKnown RBP11.89□□□□□ -0.51
CUX1-205ENST00000425244 SBF1O95248 1867 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 BICDL2A1A5D9 508 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 ENC1O14682 589 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 ERCC3P19447 782 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 CCNE1P24864 410 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 ECE1P42892 770 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 DNM2P50570 870 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 ADCY7P51828 1080 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 AMPD3Q01432 767 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 IKQ13123 557 aaPredicted RBP11.88□□□□□ -0.51
CUX1-205ENST00000425244 TNFAIP1Q13829 316 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 MCM6Q14566 821 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 NBPF12Q5TAG4 269 aaPredicted RBP11.88□□□□□ -0.51
CUX1-205ENST00000425244 TMEM179Q6ZVK1 233 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 ZNF507Q8TCN5 953 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 MMTAG2Q9BU76 263 aaKnown RBP11.88□□□□□ -0.51
CUX1-205ENST00000425244 NOC4LQ9BVI4 516 aaKnown RBP11.88□□□□□ -0.51
CUX1-205ENST00000425244 KANSL2Q9H9L4 492 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 LRWD1Q9UFC0 647 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 HERC5Q9UII4 1024 aaKnown RBP11.88□□□□□ -0.51
CUX1-205ENST00000425244 MYH4Q9Y623 1939 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 IGKV6D-41A0A0C4DH26 115 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 A0A1W2PQC6 194 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 POTEMA6NI47 508 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 SLC37A4O43826 429 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 IDEP14735 1019 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 KIAA1328Q86T90 577 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 FAM83AQ86UY5 434 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 NOC3LQ8WTT2 800 aaKnown RBP11.88□□□□□ -0.51
CUX1-205ENST00000425244 MAGEF1Q9HAY2 307 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 CAPN11Q9UMQ6 739 aa11.88□□□□□ -0.51
CUX1-205ENST00000425244 CTAGE15A4D2H0 777 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 NKRFO15226 690 aaKnown RBP eCLIP11.87□□□□□ -0.516e-7■■■□□ 16.5
CUX1-205ENST00000425244 CTAGE8P0CG41 777 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 HIRAP54198 1017 aaPredicted RBP11.87□□□□□ -0.51
CUX1-205ENST00000425244 UBE2SQ16763 222 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 CCDC122Q5T0U0 273 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 NCAPH2Q6IBW4 605 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 SV2BQ7L1I2 683 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 CTAGE6Q86UF2 777 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 CTAGE4Q8IX94 777 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 C7orf25Q9BPX7 421 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 ZNHIT6Q9NWK9 470 aaKnown RBP11.87□□□□□ -0.51
CUX1-205ENST00000425244 MARCH6O60337 910 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 SLC1A4P43007 532 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 LONRF2Q1L5Z9 754 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 TMEM266Q2M3C6 531 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 CNNM4Q6P4Q7 775 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 WDR59Q6PJI9 974 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 SIAH1Q8IUQ4 282 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 FAM114A1Q8IWE2 563 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 KIAA0895Q8NCT3 520 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 ACER1Q8TDN7 264 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 GJA10Q969M2 543 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 PNKPQ96T60 521 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 DNAJC7Q99615 494 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 ANKZF1Q9H8Y5 726 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 HDAC6Q9UBN7 1215 aa11.87□□□□□ -0.51
CUX1-205ENST00000425244 A0A1W2PRG0 241 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 GRB10Q13322 594 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 FKBP1CQ5VVH2 108 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 RIOX1Q9H6W3 641 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 ZCCHC17Q9NP64 241 aaKnown RBP11.86□□□□□ -0.51
CUX1-205ENST00000425244 MYO6Q9UM54 1294 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 PLIN4Q96Q06 1357 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 MYMKA6NI61 221 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 F5H6K3 240 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 IPO7O95373 1038 aaKnown RBP11.86□□□□□ -0.51
CUX1-205ENST00000425244 OAS2P29728 719 aaKnown RBP11.86□□□□□ -0.51
CUX1-205ENST00000425244 SNAP25P60880 206 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 HERVK_113P62684 666 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 KLRC3Q07444 240 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 SMC1AQ14683 1233 aaKnown RBP11.86□□□□□ -0.51
CUX1-205ENST00000425244 FKBP15Q5T1M5 1219 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 SLFN13Q68D06 897 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 SNX29Q8TEQ0 813 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 GLIS2Q9BZE0 524 aaPredicted RBP11.86□□□□□ -0.51
CUX1-205ENST00000425244 MYO1AQ9UBC5 1043 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 ZBTB21Q9ULJ3 1066 aa11.86□□□□□ -0.51
CUX1-205ENST00000425244 SSBP05455 408 aaKnown RBP eCLIP11.85□□□□□ -0.51
CUX1-205ENST00000425244 CYP27A1Q02318 531 aa11.85□□□□□ -0.51
CUX1-205ENST00000425244 SLC20A2Q08357 652 aa11.85□□□□□ -0.51
CUX1-205ENST00000425244 WHAMMP3Q1A5X7 153 aa11.85□□□□□ -0.51
CUX1-205ENST00000425244 DPY19L2Q6NUT2 758 aa11.85□□□□□ -0.51
CUX1-205ENST00000425244 TEPSINQ96N21 525 aa11.85□□□□□ -0.51
CUX1-205ENST00000425244 NUDT12Q9BQG2 462 aa11.85□□□□□ -0.51
CUX1-205ENST00000425244 SEMA6BQ9H3T3 888 aa11.85□□□□□ -0.51
CUX1-205ENST00000425244 POLR2AP24928 1970 aaKnown RBP11.85□□□□□ -0.51
CUX1-205ENST00000425244 CCDC151A5D8V7 595 aa11.85□□□□□ -0.51
CUX1-205ENST00000425244 BRD3Q15059 726 aa11.85□□□□□ -0.51
CUX1-205ENST00000425244 LRRC41Q15345 812 aa11.85□□□□□ -0.51
CUX1-205ENST00000425244 ASPRV1Q53RT3 343 aa11.85□□□□□ -0.51
CUX1-205ENST00000425244 NOA1Q8NC60 698 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms