RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 TSEN34Q9BSV6 310 aaKnown RBP16.9■□□□□ 0.3
TMEM248-204ENST00000424964 JADE2Q9NQC1 790 aa16.9■□□□□ 0.3
TMEM248-204ENST00000424964 KIF3AQ9Y496 699 aa16.9■□□□□ 0.3
TMEM248-204ENST00000424964 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.9■□□□□ 0.3
TMEM248-204ENST00000424964 UBIAD1Q9Y5Z9 338 aa16.9■□□□□ 0.3
TMEM248-204ENST00000424964 M0R2N6 131 aa16.89■□□□□ 0.29
TMEM248-204ENST00000424964 SORBS3O60504 671 aa16.89■□□□□ 0.29
TMEM248-204ENST00000424964 ITGB5P18084 799 aa16.89■□□□□ 0.29
TMEM248-204ENST00000424964 CST5P28325 142 aaPredicted RBP16.89■□□□□ 0.29
TMEM248-204ENST00000424964 MTMR1Q13613 665 aa16.89■□□□□ 0.29
TMEM248-204ENST00000424964 BRDTQ58F21 947 aaPredicted RBP16.89■□□□□ 0.29
TMEM248-204ENST00000424964 KRT25Q7Z3Z0 450 aa16.89■□□□□ 0.29
TMEM248-204ENST00000424964 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
TMEM248-204ENST00000424964 FERMT2Q96AC1 680 aa16.89■□□□□ 0.29
TMEM248-204ENST00000424964 GPRASP2Q96D09 838 aa16.89■□□□□ 0.29
TMEM248-204ENST00000424964 CDHR1Q96JP9 859 aa16.89■□□□□ 0.29
TMEM248-204ENST00000424964 SMC3Q9UQE7 1217 aa16.89■□□□□ 0.29
TMEM248-204ENST00000424964 CCDC194A0A1B0GVG4 234 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 CTAGE5O15320 804 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 GGPS1O95749 300 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 MMP1P03956 469 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 CYP3A4P08684 503 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 CPT1AP50416 773 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 ACLYP53396 1101 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 NKX3-2P78367 333 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 SP2Q02086 613 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 ARHGAP1Q07960 439 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 SEMA3FQ13275 785 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 LAMC2Q13753 1193 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 NONOQ15233 471 aaKnown RBP eCLIP16.88■□□□□ 0.29
TMEM248-204ENST00000424964 SAFBQ15424 915 aaKnown RBP eCLIP16.88■□□□□ 0.29
TMEM248-204ENST00000424964 CEP55Q53EZ4 464 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 CELF3Q5SZQ8 465 aaKnown RBP16.88■□□□□ 0.29
TMEM248-204ENST00000424964 CYP2W1Q8TAV3 490 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 TBCKQ8TEA7 893 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 AFG1LQ8WV93 481 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 VTI1AQ96AJ9 217 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 MLXIPQ9HAP2 919 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 PHF24Q9UPV7 400 aa16.88■□□□□ 0.29
TMEM248-204ENST00000424964 MOXD2PA6NHM9 499 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 K7ELQ4 463 aaPredicted RBP16.87■□□□□ 0.29
TMEM248-204ENST00000424964 MAFGO15525 162 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 ASGR1P07306 291 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 MYL3P08590 195 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 COL6A1P12109 1028 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 UBA1P22314 1058 aaKnown RBP16.87■□□□□ 0.29
TMEM248-204ENST00000424964 GJB2P29033 226 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 USP11P51784 963 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 MLLT1Q03111 559 aaPredicted RBP16.87■□□□□ 0.29
TMEM248-204ENST00000424964 CUL4AQ13619 759 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 NEDD9Q14511 834 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 CCSAPQ6IQ19 270 aaPredicted RBP16.87■□□□□ 0.29
TMEM248-204ENST00000424964 PLA2G4DQ86XP0 818 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 HSCBQ8IWL3 235 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 DIS3L2Q8IYB7 885 aaKnown RBP16.87■□□□□ 0.29
TMEM248-204ENST00000424964 CRYGNQ8WXF5 182 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 SNX21Q969T3 373 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 HTATIP2Q9BUP3 242 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 PKD2L1Q9P0L9 805 aa16.87■□□□□ 0.29
TMEM248-204ENST00000424964 BTBD18B2RXH4 712 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 MEIS1O00470 390 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 ARP10275 920 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 ATN1P54259 1190 aaPredicted RBP16.86■□□□□ 0.29
TMEM248-204ENST00000424964 NR5A1Q13285 461 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 INF2Q27J81 1249 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 MYSM1Q5VVJ2 828 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 CXCL17Q6UXB2 119 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 PIK3AP1Q6ZUJ8 805 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 CYFIP1Q7L576 1253 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 NIPA1Q7RTP0 329 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 GIMAP8Q8ND71 665 aaPredicted RBP16.86■□□□□ 0.29
TMEM248-204ENST00000424964 FBXO18Q8NFZ0 1043 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 GLT1D1Q96MS3 346 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 SPATA33Q96N06 139 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 SENP7Q9BQF6 1050 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 KCNH7Q9NS40 1196 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 POLR3EQ9NVU0 708 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 DOCK5Q9H7D0 1870 aa16.86■□□□□ 0.29
TMEM248-204ENST00000424964 A0A1W2PQ45 241 aaPredicted RBP16.85■□□□□ 0.29
TMEM248-204ENST00000424964 A0A1W2PQY0 241 aa16.85■□□□□ 0.29
TMEM248-204ENST00000424964 A6NJR5 290 aa16.85■□□□□ 0.29
TMEM248-204ENST00000424964 FAM86B1E9PN63 330 aa16.85■□□□□ 0.29
TMEM248-204ENST00000424964 ATP9AO75110 1047 aa16.85■□□□□ 0.29
TMEM248-204ENST00000424964 FAM86B2P0C5J1 330 aa16.85■□□□□ 0.29
TMEM248-204ENST00000424964 CIITAP33076 1130 aa16.85■□□□□ 0.29
TMEM248-204ENST00000424964 GNL2Q13823 731 aaKnown RBP16.85■□□□□ 0.29
TMEM248-204ENST00000424964 PRR16Q569H4 304 aa16.85■□□□□ 0.29
TMEM248-204ENST00000424964 DPF3Q92784 378 aa16.85■□□□□ 0.29
TMEM248-204ENST00000424964 EMID1Q96A84 441 aaPredicted RBP16.85■□□□□ 0.29
TMEM248-204ENST00000424964 BCAS3Q9H6U6 928 aa16.85■□□□□ 0.29
TMEM248-204ENST00000424964 STARD7Q9NQZ5 370 aa16.85■□□□□ 0.29
TMEM248-204ENST00000424964 NOP56O00567 594 aaKnown RBP16.84■□□□□ 0.29
TMEM248-204ENST00000424964 KPNA6O60684 536 aa16.84■□□□□ 0.29
TMEM248-204ENST00000424964 MMP3P08254 477 aa16.84■□□□□ 0.29
TMEM248-204ENST00000424964 KCNA2P16389 499 aa16.84■□□□□ 0.29
TMEM248-204ENST00000424964 SP4Q02446 784 aa16.84■□□□□ 0.29
TMEM248-204ENST00000424964 LETM2Q2VYF4 491 aa16.84■□□□□ 0.29
TMEM248-204ENST00000424964 METTL7BQ6UX53 244 aa16.84■□□□□ 0.29
TMEM248-204ENST00000424964 SLC39A5Q6ZMH5 540 aa16.84■□□□□ 0.29
TMEM248-204ENST00000424964 PPTC7Q8NI37 304 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms