RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 PRPF3O43395 683 aaKnown RBP12.55□□□□□ -0.4
USP49-204ENST00000423567 TGFB3P10600 412 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 SCG2P13521 617 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 MAGEA10P43363 369 aaPredicted RBP12.55□□□□□ -0.4
USP49-204ENST00000423567 CCT2P78371 535 aaKnown RBP12.55□□□□□ -0.4
USP49-204ENST00000423567 ITGA7Q13683 1181 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 ANKRD1Q15327 319 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 PFKFB3Q16875 520 aaPredicted RBP12.55□□□□□ -0.4
USP49-204ENST00000423567 HABP4Q5JVS0 413 aaKnown RBP12.55□□□□□ -0.4
USP49-204ENST00000423567 PCNX4Q63HM2 1172 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 ANKRD33Q7Z3H0 272 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 NLRX1Q86UT6 975 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 DHX37Q8IY37 1157 aaKnown RBP12.55□□□□□ -0.4
USP49-204ENST00000423567 MTG1Q9BT17 334 aaPredicted RBP12.55□□□□□ -0.4
USP49-204ENST00000423567 SLC26A6Q9BXS9 759 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 RNF26Q9BY78 433 aaPredicted RBP12.55□□□□□ -0.4
USP49-204ENST00000423567 RIC8AQ9NPQ8 531 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 PDLIM7Q9NR12 457 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 TMEM39AQ9NV64 488 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 FRMPD4Q14CM0 1322 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 A0A1W2PPC1 479 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 FOSP01100 380 aaPredicted RBP12.54□□□□□ -0.4
USP49-204ENST00000423567 RAG1P15918 1043 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 IFNAR1P17181 557 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 PURAQ00577 322 aaKnown RBP12.54□□□□□ -0.4
USP49-204ENST00000423567 MDM2Q00987 491 aaPredicted RBP12.54□□□□□ -0.4
USP49-204ENST00000423567 ARHGAP1Q07960 439 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 UBE2SQ16763 222 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 CCDC148Q8NFR7 591 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 AFG1LQ8WV93 481 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 PHKBQ93100 1093 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 CDHR1Q96JP9 859 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 GDF15Q99988 308 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 UBE2OQ9C0C9 1292 aaKnown RBP12.54□□□□□ -0.4
USP49-204ENST00000423567 MLXIPQ9HAP2 919 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 NCOA5Q9HCD5 579 aaKnown RBP12.54□□□□□ -0.4
USP49-204ENST00000423567 C6orf50Q9HD87 102 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 RTEL1Q9NZ71 1219 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 PCDHA6Q9UN73 950 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 PCDHA8Q9Y5H6 950 aa12.54□□□□□ -0.4
USP49-204ENST00000423567 FIBPO43427 364 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 CDKL5O76039 1030 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 RGS20O76081 388 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 GGPS1O95749 300 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 MMP3P08254 477 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 UBA1P22314 1058 aaKnown RBP12.53□□□□□ -0.4
USP49-204ENST00000423567 GNA11P29992 359 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 BMP8BP34820 402 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 CDK7P50613 346 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 PSMC6P62333 389 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 MRPS9P82933 396 aaKnown RBP12.53□□□□□ -0.4
USP49-204ENST00000423567 SSRP1Q08945 709 aaKnown RBP12.53□□□□□ -0.4
USP49-204ENST00000423567 STK3Q13188 491 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 AP3B2Q13367 1082 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 NEDD9Q14511 834 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 DGKDQ16760 1214 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 FAM47CQ5HY64 1035 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 MCTP2Q6DN12 878 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 EMID1Q96A84 441 aaPredicted RBP12.53□□□□□ -0.4
USP49-204ENST00000423567 ZFP91Q96JP5 570 aaPredicted RBP12.53□□□□□ -0.4
USP49-204ENST00000423567 SPATA33Q96N06 139 aa12.53□□□□□ -0.4
USP49-204ENST00000423567 INPP4AQ96PE3 977 aaPredicted RBP12.53□□□□□ -0.4
USP49-204ENST00000423567 LARP6Q9BRS8 491 aaKnown RBP12.53□□□□□ -0.4
USP49-204ENST00000423567 ALDH8A1Q9H2A2 487 aaPredicted RBP12.53□□□□□ -0.4
USP49-204ENST00000423567 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
USP49-204ENST00000423567 ALPK3Q96L96 1907 aa12.52□□□□□ -0.4
USP49-204ENST00000423567 ESYT2A0FGR8 921 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 TRIM43BA6NCK2 446 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.41
USP49-204ENST00000423567 KIAA0355O15063 1070 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 ICAM3P32942 547 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 CHMP4BP1P59074 171 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 FAAP100Q0VG06 881 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 NTRK3Q16288 839 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 CELF3Q5SZQ8 465 aaKnown RBP12.52□□□□□ -0.41
USP49-204ENST00000423567 TYW1BQ6NUM6 668 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 MAMSTRQ6ZN01 415 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 SH3RF1Q7Z6J0 888 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 FAM126BQ8IXS8 530 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 SLC43A3Q8NBI5 491 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 GIMAP8Q8ND71 665 aaPredicted RBP12.52□□□□□ -0.41
USP49-204ENST00000423567 PPTC7Q8NI37 304 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 BICD2Q8TD16 824 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 RNF25Q96BH1 459 aaPredicted RBP12.52□□□□□ -0.41
USP49-204ENST00000423567 TRIM43Q96BQ3 446 aaPredicted RBP12.52□□□□□ -0.41
USP49-204ENST00000423567 GPRASP2Q96D09 838 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 ANO3Q9BYT9 981 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 CEP290O15078 2479 aa12.52□□□□□ -0.41
USP49-204ENST00000423567 SPATA31C2B4DYI2 1134 aa12.51□□□□□ -0.41
USP49-204ENST00000423567 SORBS3O60504 671 aa12.51□□□□□ -0.41
USP49-204ENST00000423567 PPFIA3O75145 1194 aa12.51□□□□□ -0.41
USP49-204ENST00000423567 PPFIA4O75335 1185 aa12.51□□□□□ -0.41
USP49-204ENST00000423567 DEXIO95424 95 aa12.51□□□□□ -0.41
USP49-204ENST00000423567 SUPT20HL2P0C7V6 817 aa12.51□□□□□ -0.41
USP49-204ENST00000423567 NEK4P51957 841 aa12.51□□□□□ -0.41
USP49-204ENST00000423567 PKN1Q16512 942 aa12.51□□□□□ -0.41
USP49-204ENST00000423567 MYSM1Q5VVJ2 828 aa12.51□□□□□ -0.41
USP49-204ENST00000423567 REXO1Q8N1G1 1221 aaKnown RBP12.51□□□□□ -0.41
USP49-204ENST00000423567 BADQ92934 168 aa12.51□□□□□ -0.41
USP49-204ENST00000423567 KATNAL1Q9BW62 490 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms