RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 GSG1L2A8MUP6 293 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 UPP2O95045 317 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 TTLL1O95922 423 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 CKBP12277 381 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 CALML3P27482 149 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 PDE4AP27815 886 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 LTBRP36941 435 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 GGCXP38435 758 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 IKBKEQ14164 716 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 LRRFIP1Q32MZ4 808 aaKnown RBP8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 TKFCQ3LXA3 575 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 BRDTQ58F21 947 aaPredicted RBP8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 ZKSCAN2Q63HK3 967 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 CHST3Q7LGC8 479 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 RPAINQ86UA6 219 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 ERC1Q8IUD2 1116 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 MYOCDQ8IZQ8 938 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 CLASRPQ8N2M8 674 aaKnown RBP8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 MORC4Q8TE76 937 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 AFAP1L1Q8TED9 768 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 PABPC5Q96DU9 382 aaKnown RBP8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 UPF3BQ9BZI7 483 aaKnown RBP8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 IGFLR1Q9H665 355 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 ARPP21Q9UBL0 812 aaPredicted RBP8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 CCPG1Q9ULG6 757 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 PRR12Q9ULL5 1215 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 DCHS1Q96JQ0 3298 aa8.9□□□□□ -0.98
HLA-DQA1-204ENST00000422863 RIF1Q5UIP0 2472 aaKnown RBP8.9□□□□□ -0.99
HLA-DQA1-204ENST00000422863 ABHD14A-ACY1A0A1B0GW23 586 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 A6NJR5 290 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 NFIBO00712 420 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 MBTPS2O43462 519 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 WFS1O76024 890 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 ARIH2O95376 493 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 CXCL10P02778 98 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 TSPY3P0CV98 308 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 TSPY8P0CW00 308 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 FDX1P10109 184 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 TXNP10599 105 aaKnown RBP8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 RLBP1P12271 317 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 GTF2F1P35269 517 aaKnown RBP eCLIP8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 SLC1A4P43007 532 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 ZNF200P98182 395 aaPredicted RBP8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 TFAP4Q01664 338 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 PTPN11Q06124 597 aaPredicted RBP8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 PDE4BQ07343 736 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 PTPROQ16827 1216 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 SBK1Q52WX2 424 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 ZNF618Q5T7W0 954 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 TTBK2Q6IQ55 1244 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 FAM160B2Q86V87 743 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 CCDC155Q8N6L0 562 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 GMCL1P1Q8NEA9 526 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 CAGE1Q8TC20 777 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 EDAQ92838 391 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 WNT8BQ93098 351 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 STRBPQ96SI9 672 aaKnown RBP8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 ALG1Q9BT22 464 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 TMUB1Q9BVT8 246 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 INCENPQ9NQS7 918 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 HDAC6Q9UBN7 1215 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 PRKAG3Q9UGI9 489 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 CTNNA3Q9UI47 895 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 FAM50BQ9Y247 325 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 INSL6Q9Y581 213 aa8.89□□□□□ -0.99
HLA-DQA1-204ENST00000422863 COL4A6Q14031 1691 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 TMEM221A6NGB7 291 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 H3BNC9 293 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 M0R296 226 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 STXBP3O00186 592 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 APPP05067 770 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 SLC16A2P36021 539 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 TDO2P48775 406 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 PRR20EP86478 221 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 PRR20CP86479 221 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 PRR20DP86480 221 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 PRR20BP86481 221 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 PRR20AP86496 221 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 PDE4DQ08499 809 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 MBTPS1Q14703 1052 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 PPP2R5BQ15173 497 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 UBE3CQ15386 1083 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 LY6KQ17RY6 165 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 TIGD5Q53EQ6 642 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 HERC4Q5GLZ8 1057 aaPredicted RBP8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 RCSD1Q6JBY9 416 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 SLC30A10Q6XR72 485 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 RPAP2Q8IXW5 612 aaPredicted RBP8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 TMEM192Q8IY95 271 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 AFG1LQ8WV93 481 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 ATOH1Q92858 354 aaPredicted RBP8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 NSUN3Q9H649 340 aaKnown RBP8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 ADD3Q9UEY8 706 aaKnown RBP8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 FAM186AA6NE01 2351 aa8.88□□□□□ -0.99
HLA-DQA1-204ENST00000422863 CACNA1HO95180 2353 aa8.87□□□□□ -0.99
HLA-DQA1-204ENST00000422863 PLXNA4Q9HCM2 1894 aa8.87□□□□□ -0.99
HLA-DQA1-204ENST00000422863 RAD50Q92878 1312 aa8.87□□□□□ -0.99
HLA-DQA1-204ENST00000422863 LINC01565O15544 149 aa8.87□□□□□ -0.99
HLA-DQA1-204ENST00000422863 WIPF1O43516 503 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms