RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 FAM205CA6NFA0 338 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 RPSAP08865 295 aaKnown RBP11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 LIG4P49917 911 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 OSTNP61366 133 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 TAF12Q16514 161 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 ARHGEF16Q5VV41 709 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 USP49Q70CQ1 688 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 DCLK2Q8N568 766 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 CDCA7Q9BWT1 371 aaPredicted RBP11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 BHMT2Q9H2M3 363 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 GPR108Q9NPR9 543 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 NOD1Q9Y239 953 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 USP17L15C9J2P7 530 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 USP17L13C9JLJ4 530 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 USP17L11C9JVI0 530 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 USP17L18D6R9N7 530 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 USP17L22D6RA61 530 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 USP17L17D6RBQ6 530 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 USP17L19D6RCP7 530 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 USP17L20D6RJB6 530 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 DDAH1O94760 285 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 IRX3P78415 501 aaPredicted RBP11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 USP17L24Q0WX57 530 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 USP17L6PQ6QN14 398 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 DPF2Q92785 391 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 HPS3Q969F9 1004 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 IVNS1ABPQ9Y6Y0 642 aa11.59□□□□□ -0.55
SEMA4D-208ENST00000422704 THAP12O43422 761 aa11.58□□□□□ -0.55
SEMA4D-208ENST00000422704 POLR2MP0CAP2 368 aa11.58□□□□□ -0.55
SEMA4D-208ENST00000422704 ATP11AP98196 1134 aa11.58□□□□□ -0.55
SEMA4D-208ENST00000422704 CACNA2D3Q8IZS8 1091 aa11.58□□□□□ -0.55
SEMA4D-208ENST00000422704 ANKRD35Q8N283 1001 aa11.58□□□□□ -0.55
SEMA4D-208ENST00000422704 TCP11Q8WWU5 503 aa11.58□□□□□ -0.55
SEMA4D-208ENST00000422704 CELF1Q92879 486 aaKnown RBP11.58□□□□□ -0.55
SEMA4D-208ENST00000422704 SH2D3AQ9BRG2 576 aa11.58□□□□□ -0.55
SEMA4D-208ENST00000422704 CARD10Q9BWT7 1032 aa11.58□□□□□ -0.55
SEMA4D-208ENST00000422704 AMNQ9BXJ7 453 aa11.58□□□□□ -0.55
SEMA4D-208ENST00000422704 NHEJ1Q9H9Q4 299 aaPredicted RBP11.58□□□□□ -0.55
SEMA4D-208ENST00000422704 HDAC6Q9UBN7 1215 aa11.58□□□□□ -0.55
SEMA4D-208ENST00000422704 CCPG1Q9ULG6 757 aa11.58□□□□□ -0.55
SEMA4D-208ENST00000422704 YARSP54577 528 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 TAOK1Q7L7X3 1001 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 SESTD1Q86VW0 696 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 RAB17Q9H0T7 212 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 MLXIPQ9HAP2 919 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 LIFRP42702 1097 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 DYNLT1P63172 113 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 ITIH3Q06033 890 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 TCP11X2Q5H9J9 407 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 FMR1NBQ8N0W7 255 aaPredicted RBP11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 KIF28PB7ZC32 967 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 GOLGA8SH3BPF8 625 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 SERPINB2P05120 415 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 CASP8Q14790 479 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 RPGRIP1Q96KN7 1286 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 NUCKS1Q9H1E3 243 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 SWAP70Q9UH65 585 aa11.58□□□□□ -0.56
SEMA4D-208ENST00000422704 PXDNQ92626 1479 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 HNRNPH2P55795 449 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 ZNF658Q5TYW1 1059 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 TTBK2Q6IQ55 1244 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 PALM2Q8IXS6 379 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 APOL6Q9BWW8 343 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 NDST4Q9H3R1 872 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 EMILIN3Q9NT22 766 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 STK32BQ9NY57 414 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 TRPC6Q9Y210 931 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 MYO1FO00160 1098 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 PTPREP23469 700 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 PEX19P40855 299 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 CTTNQ14247 550 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 Q3C1V9 767 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 FYB2Q5VWT5 728 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 OTUD6AQ7L8S5 288 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 KRT26Q7Z3Y9 468 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 NIM1KQ8IY84 436 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 FAM186BQ8IYM0 893 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 TSKSQ9UJT2 592 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 ARHGAP25P42331 645 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 DHX9Q08211 1270 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 ZNF394Q53GI3 561 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 C1orf112Q9NSG2 853 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 WDR70Q9NW82 654 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 MKRN1Q9UHC7 482 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 NFU1Q9UMS0 254 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 MAD1L1Q9Y6D9 718 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 MAP1BP46821 2468 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 HEG1Q9ULI3 1381 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 KDM3AQ9Y4C1 1321 aa11.57□□□□□ -0.56
SEMA4D-208ENST00000422704 NBPF26B4DH59 902 aa11.56□□□□□ -0.56
SEMA4D-208ENST00000422704 ABL1P00519 1130 aa11.56□□□□□ -0.56
SEMA4D-208ENST00000422704 ATP2B4P23634 1241 aa11.56□□□□□ -0.56
SEMA4D-208ENST00000422704 ATP5DP30049 168 aa11.56□□□□□ -0.56
SEMA4D-208ENST00000422704 DDIT3P35638 169 aa11.56□□□□□ -0.56
SEMA4D-208ENST00000422704 NBPF10Q6P3W6 841 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-208ENST00000422704 POTEDQ86YR6 584 aa11.56□□□□□ -0.56
SEMA4D-208ENST00000422704 CCDC13Q8IYE1 715 aa11.56□□□□□ -0.56
SEMA4D-208ENST00000422704 NBPF15Q8N660 670 aa11.56□□□□□ -0.56
SEMA4D-208ENST00000422704 RSAD2Q8WXG1 361 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms