RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 STXBP3O00186 592 aa17.04■□□□□ 0.32
LINC01840-201ENST00000421870 PDIA3P30101 505 aaKnown RBP17.04■□□□□ 0.32
LINC01840-201ENST00000421870 SEMA3FQ13275 785 aa17.04■□□□□ 0.32
LINC01840-201ENST00000421870 TOB2Q14106 344 aaPredicted RBP17.04■□□□□ 0.32
LINC01840-201ENST00000421870 HSDL1Q3SXM5 330 aa17.04■□□□□ 0.32
LINC01840-201ENST00000421870 GNPTABQ3T906 1256 aa17.04■□□□□ 0.32
LINC01840-201ENST00000421870 PPP1R18Q6NYC8 613 aa17.04■□□□□ 0.32
LINC01840-201ENST00000421870 SESTD1Q86VW0 696 aa17.04■□□□□ 0.32
LINC01840-201ENST00000421870 TMEM199Q8N511 208 aa17.04■□□□□ 0.32
LINC01840-201ENST00000421870 RIC8AQ9NPQ8 531 aa17.04■□□□□ 0.32
LINC01840-201ENST00000421870 BARHL2Q9NY43 387 aa17.04■□□□□ 0.32
LINC01840-201ENST00000421870 PCDHA6Q9UN73 950 aa17.04■□□□□ 0.32
LINC01840-201ENST00000421870 PCDHA8Q9Y5H6 950 aa17.04■□□□□ 0.32
LINC01840-201ENST00000421870 CYP46A1Q9Y6A2 500 aa17.04■□□□□ 0.32
LINC01840-201ENST00000421870 DOCK5Q9H7D0 1870 aa17.03■□□□□ 0.32
LINC01840-201ENST00000421870 HAS3O00219 553 aa17.03■□□□□ 0.32
LINC01840-201ENST00000421870 PRPF3O43395 683 aaKnown RBP17.03■□□□□ 0.32
LINC01840-201ENST00000421870 FIBPO43427 364 aa17.03■□□□□ 0.32
LINC01840-201ENST00000421870 GGPS1O95749 300 aa17.03■□□□□ 0.32
LINC01840-201ENST00000421870 UBA1P22314 1058 aaKnown RBP17.03■□□□□ 0.32
LINC01840-201ENST00000421870 NTRK3Q16288 839 aa17.03■□□□□ 0.32
LINC01840-201ENST00000421870 UBE2SQ16763 222 aa17.03■□□□□ 0.32
LINC01840-201ENST00000421870 PFKFB3Q16875 520 aaPredicted RBP17.03■□□□□ 0.32
LINC01840-201ENST00000421870 C16orf59Q7L2K0 433 aa17.03■□□□□ 0.32
LINC01840-201ENST00000421870 SENP7Q9BQF6 1050 aa17.03■□□□□ 0.32
LINC01840-201ENST00000421870 NOC4LQ9BVI4 516 aaKnown RBP17.03■□□□□ 0.32
LINC01840-201ENST00000421870 HIPK3Q9H422 1215 aa17.03■□□□□ 0.32
LINC01840-201ENST00000421870 BCAS3Q9H6U6 928 aa17.03■□□□□ 0.32
LINC01840-201ENST00000421870 TRMT13Q9NUP7 481 aaKnown RBP17.03■□□□□ 0.32
LINC01840-201ENST00000421870 NAP1L2Q9ULW6 460 aaPredicted RBP17.03■□□□□ 0.32
LINC01840-201ENST00000421870 SMCO2A6NFE2 343 aa17.02■□□□□ 0.32
LINC01840-201ENST00000421870 SPDYE3A6NKU9 549 aa17.02■□□□□ 0.32
LINC01840-201ENST00000421870 CSF2RAP15509 400 aa17.02■□□□□ 0.32
LINC01840-201ENST00000421870 CYP2C18P33260 490 aa17.02■□□□□ 0.32
LINC01840-201ENST00000421870 CLK2P49760 499 aaKnown RBP17.02■□□□□ 0.32
LINC01840-201ENST00000421870 NAPAP54920 295 aa17.02■□□□□ 0.32
LINC01840-201ENST00000421870 NEDD9Q14511 834 aa17.02■□□□□ 0.32
LINC01840-201ENST00000421870 PKN1Q16512 942 aa17.02■□□□□ 0.32
LINC01840-201ENST00000421870 ZNF274Q96GC6 653 aaPredicted RBP17.02■□□□□ 0.32
LINC01840-201ENST00000421870 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
LINC01840-201ENST00000421870 PPP1R12CQ9BZL4 782 aa17.02■□□□□ 0.32
LINC01840-201ENST00000421870 GLT8D2Q9H1C3 349 aa17.02■□□□□ 0.32
LINC01840-201ENST00000421870 MLXIPQ9HAP2 919 aa17.02■□□□□ 0.32
LINC01840-201ENST00000421870 TRIP12Q14669 1992 aaPredicted RBP17.02■□□□□ 0.31
LINC01840-201ENST00000421870 MAFGO15525 162 aa17.01■□□□□ 0.31
LINC01840-201ENST00000421870 F2P00734 622 aa17.01■□□□□ 0.31
LINC01840-201ENST00000421870 FOSP01100 380 aaPredicted RBP17.01■□□□□ 0.31
LINC01840-201ENST00000421870 SCG2P13521 617 aa17.01■□□□□ 0.31
LINC01840-201ENST00000421870 IFNAR1P17181 557 aa17.01■□□□□ 0.31
LINC01840-201ENST00000421870 ITGB5P18084 799 aa17.01■□□□□ 0.31
LINC01840-201ENST00000421870 PPIGQ13427 754 aaKnown RBP eCLIP17.01■□□□□ 0.31
LINC01840-201ENST00000421870 FAM47CQ5HY64 1035 aa17.01■□□□□ 0.31
LINC01840-201ENST00000421870 NLRX1Q86UT6 975 aa17.01■□□□□ 0.31
LINC01840-201ENST00000421870 GPRASP2Q96D09 838 aa17.01■□□□□ 0.31
LINC01840-201ENST00000421870 IL17RAQ96F46 866 aa17.01■□□□□ 0.31
LINC01840-201ENST00000421870 C16orf70Q9BSU1 422 aa17.01■□□□□ 0.31
LINC01840-201ENST00000421870 UBIAD1Q9Y5Z9 338 aa17.01■□□□□ 0.31
LINC01840-201ENST00000421870 UMODL1Q5DID0 1318 aa17■□□□□ 0.31
LINC01840-201ENST00000421870 CYP2C9P11712 490 aa17■□□□□ 0.31
LINC01840-201ENST00000421870 PSEN2P49810 448 aa17■□□□□ 0.31
LINC01840-201ENST00000421870 ANAPC15P60006 121 aa17■□□□□ 0.31
LINC01840-201ENST00000421870 TMEM240Q5SV17 173 aa17■□□□□ 0.31
LINC01840-201ENST00000421870 METTL7BQ6UX53 244 aa17■□□□□ 0.31
LINC01840-201ENST00000421870 GIMAP8Q8ND71 665 aaPredicted RBP17■□□□□ 0.31
LINC01840-201ENST00000421870 PPP1R13LQ8WUF5 828 aa17■□□□□ 0.31
LINC01840-201ENST00000421870 CDHR1Q96JP9 859 aa17■□□□□ 0.31
LINC01840-201ENST00000421870 BUD13Q9BRD0 619 aaKnown RBP eCLIP17■□□□□ 0.31
LINC01840-201ENST00000421870 KATNAL1Q9BW62 490 aa17■□□□□ 0.31
LINC01840-201ENST00000421870 RNF26Q9BY78 433 aaPredicted RBP17■□□□□ 0.31
LINC01840-201ENST00000421870 UPF3BQ9BZI7 483 aaKnown RBP17■□□□□ 0.31
LINC01840-201ENST00000421870 ZMYND12Q9H0C1 365 aa17■□□□□ 0.31
LINC01840-201ENST00000421870 WNT8AQ9H1J5 351 aa17■□□□□ 0.31
LINC01840-201ENST00000421870 JADE2Q9NQC1 790 aa17■□□□□ 0.31
LINC01840-201ENST00000421870 ESYT2A0FGR8 921 aa16.99■□□□□ 0.31
LINC01840-201ENST00000421870 EIF5BO60841 1220 aaKnown RBP16.99■□□□□ 0.31
LINC01840-201ENST00000421870 ATP9AO75110 1047 aa16.99■□□□□ 0.31
LINC01840-201ENST00000421870 ADCY7P51828 1080 aa16.99■□□□□ 0.31
LINC01840-201ENST00000421870 CCT2P78371 535 aaKnown RBP16.99■□□□□ 0.31
LINC01840-201ENST00000421870 RASIP1Q5U651 963 aa16.99■□□□□ 0.31
LINC01840-201ENST00000421870 CYFIP1Q7L576 1253 aa16.99■□□□□ 0.31
LINC01840-201ENST00000421870 PHKBQ93100 1093 aa16.99■□□□□ 0.31
LINC01840-201ENST00000421870 VWCEQ96DN2 955 aa16.99■□□□□ 0.31
LINC01840-201ENST00000421870 CTAGE1Q96RT6 745 aa16.99■□□□□ 0.31
LINC01840-201ENST00000421870 EHMT1Q9H9B1 1298 aa16.99■□□□□ 0.31
LINC01840-201ENST00000421870 IL23AQ9NPF7 189 aa16.99■□□□□ 0.31
LINC01840-201ENST00000421870 GTF2IRD1Q9UHL9 959 aa16.99■□□□□ 0.31
LINC01840-201ENST00000421870 PITPNM1O00562 1244 aa16.98■□□□□ 0.31
LINC01840-201ENST00000421870 SORBS3O60504 671 aa16.98■□□□□ 0.31
LINC01840-201ENST00000421870 KCNA2P16389 499 aa16.98■□□□□ 0.31
LINC01840-201ENST00000421870 CCL23P55773 120 aa16.98■□□□□ 0.31
LINC01840-201ENST00000421870 SMAD3P84022 425 aaKnown RBP16.98■□□□□ 0.31
LINC01840-201ENST00000421870 MFSD10Q14728 455 aa16.98■□□□□ 0.31
LINC01840-201ENST00000421870 KIAA0753Q2KHM9 967 aa16.98■□□□□ 0.31
LINC01840-201ENST00000421870 FAM109BQ6ICB4 259 aaPredicted RBP16.98■□□□□ 0.31
LINC01840-201ENST00000421870 GDF6Q6KF10 455 aaPredicted RBP16.98■□□□□ 0.31
LINC01840-201ENST00000421870 GPR20Q99678 358 aa16.98■□□□□ 0.31
LINC01840-201ENST00000421870 PDRG1Q9NUG6 133 aa16.98■□□□□ 0.31
LINC01840-201ENST00000421870 HDAC6Q9UBN7 1215 aa16.98■□□□□ 0.31
LINC01840-201ENST00000421870 H3BRB1 525 aa16.97■□□□□ 0.31
LINC01840-201ENST00000421870 ZNF286BP0CG31 522 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms