RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 CCDC96Q2M329 555 aa7.83□□□□□ -1.16
PMS1-208ENST00000421722 FAM43BQ6ZT52 329 aaPredicted RBP7.83□□□□□ -1.16
PMS1-208ENST00000421722 EP400NLQ6ZTU2 488 aa7.83□□□□□ -1.16
PMS1-208ENST00000421722 SERINC5Q86VE9 423 aa7.83□□□□□ -1.16
PMS1-208ENST00000421722 STK11IPQ8N1F8 1099 aa7.83□□□□□ -1.16
PMS1-208ENST00000421722 PPTC7Q8NI37 304 aa7.83□□□□□ -1.16
PMS1-208ENST00000421722 OSBP2Q969R2 916 aa7.83□□□□□ -1.16
PMS1-208ENST00000421722 GALR2O43603 387 aaPredicted RBP7.82□□□□□ -1.16
PMS1-208ENST00000421722 MMP1P03956 469 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 ATF7P17544 494 aaPredicted RBP7.82□□□□□ -1.16
PMS1-208ENST00000421722 CTNNB1P35222 781 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 NBL1P41271 181 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 RPS6P62753 249 aaKnown RBP7.82□□□□□ -1.16
PMS1-208ENST00000421722 PPARAQ07869 468 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 FAM26DQ5JW98 314 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 KCNV1Q6PIU1 500 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 EFHBQ8N7U6 833 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 P2RX5Q93086 422 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 CHMP4BQ9H444 224 aaKnown RBP7.82□□□□□ -1.16
PMS1-208ENST00000421722 TCP11L1Q9NUJ3 509 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 TRANK1O15050 2925 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 ORC4O43929 436 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 CHGBP05060 677 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 TOP1P11387 765 aaKnown RBP7.82□□□□□ -1.16
PMS1-208ENST00000421722 RLBP1P12271 317 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 HOXC8P31273 242 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 STXBP2Q15833 593 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 PPP1R13LQ8WUF5 828 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 CLP1Q92989 425 aaKnown RBP7.82□□□□□ -1.16
PMS1-208ENST00000421722 ALG1Q9BT22 464 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 DDX41Q9UJV9 622 aaKnown RBP7.82□□□□□ -1.16
PMS1-208ENST00000421722 ANAPC4Q9UJX5 808 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 ATG2AQ2TAZ0 1938 aa7.82□□□□□ -1.16
PMS1-208ENST00000421722 ABCB11O95342 1321 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 TBX10O75333 385 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 PPFIA4O75335 1185 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 APPP05067 770 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 ICAM3P32942 547 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 KIAA0753Q2KHM9 967 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 MCF2L2Q86YR7 1114 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 NSUN6Q8TEA1 469 aaKnown RBP7.81□□□□□ -1.16
PMS1-208ENST00000421722 WNT8BQ93098 351 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 ASIC4Q96FT7 647 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 PHF7Q9BWX1 381 aaPredicted RBP7.81□□□□□ -1.16
PMS1-208ENST00000421722 NAPBQ9H115 298 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 IL17RBQ9NRM6 502 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 ECHDC1Q9NTX5 307 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.81□□□□□ -1.16
PMS1-208ENST00000421722 C17orf102A2RUQ5 167 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 PRR23AA6NEV1 266 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 TSPY2A6NKD2 308 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 M0R2C6 588 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 GRM6O15303 877 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 EIF3JO75822 258 aaKnown RBP7.81□□□□□ -1.16
PMS1-208ENST00000421722 FGRP09769 529 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 THPOP40225 353 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 CHMP4BP1P59074 171 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 DLX2Q07687 328 aaPredicted RBP7.81□□□□□ -1.16
PMS1-208ENST00000421722 LY6KQ17RY6 165 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 MCTP2Q6DN12 878 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 TTBK2Q6IQ55 1244 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 SAMD3Q8N6K7 520 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 GPATCH3Q96I76 525 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 STX8Q9UNK0 236 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 LAMA2P24043 3122 aaKnown RBP7.81□□□□□ -1.16
PMS1-208ENST00000421722 KIAA1217Q5T5P2 1943 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 VCANP13611 3396 aa7.81□□□□□ -1.16
PMS1-208ENST00000421722 ADGRA3Q8IWK6 1321 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 LINC00271P0C7V0 271 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 GNAT1P11488 350 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 NDUFV1P49821 464 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 VCPP55072 806 aaKnown RBP7.8□□□□□ -1.16
PMS1-208ENST00000421722 RRP1P56182 461 aaKnown RBP7.8□□□□□ -1.16
PMS1-208ENST00000421722 PTPN21Q16825 1174 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 SEPT14Q6ZU15 432 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 SMRP1Q8NCR6 262 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 CDCA3Q99618 268 aaPredicted RBP7.8□□□□□ -1.16
PMS1-208ENST00000421722 FSD1Q9BTV5 496 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 IFIH1Q9BYX4 1025 aaKnown RBP7.8□□□□□ -1.16
PMS1-208ENST00000421722 RC3H2Q9HBD1 1191 aaKnown RBP7.8□□□□□ -1.16
PMS1-208ENST00000421722 CHD7Q9P2D1 2997 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 TECTAO75443 2155 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 SLC16A2P36021 539 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 ID4P47928 161 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 NT5C2P49902 561 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 ZNF543Q08ER8 600 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 CLUL1Q15846 466 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 DHX37Q8IY37 1157 aaKnown RBP7.8□□□□□ -1.16
PMS1-208ENST00000421722 CMTR2Q8IYT2 770 aaKnown RBP7.8□□□□□ -1.16
PMS1-208ENST00000421722 SYTL5Q8TDW5 730 aaPredicted RBP7.8□□□□□ -1.16
PMS1-208ENST00000421722 ZNF689Q96CS4 500 aaPredicted RBP7.8□□□□□ -1.16
PMS1-208ENST00000421722 TTC14Q96N46 770 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 LRRCC1Q9C099 1032 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 FAM86C1Q9NVL1 165 aa7.8□□□□□ -1.16
PMS1-208ENST00000421722 MAP3K20Q9NYL2 800 aaKnown RBP7.8□□□□□ -1.16
PMS1-208ENST00000421722 SNHG28P0DPA3 235 aa7.79□□□□□ -1.16
PMS1-208ENST00000421722 ZNF200P98182 395 aaPredicted RBP7.79□□□□□ -1.16
PMS1-208ENST00000421722 GHRHRQ02643 423 aa7.79□□□□□ -1.16
PMS1-208ENST00000421722 ALX1Q15699 326 aa7.79□□□□□ -1.16
PMS1-208ENST00000421722 CELF3Q5SZQ8 465 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms