RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 SUSD6Q92537 303 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 DCP1AQ9NPI6 582 aaPredicted RBP6.74□□□□□ -1.33
HDAC8-212ENST00000421523 CDH22Q9UJ99 828 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 ZMIZ1Q9ULJ6 1067 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 USP18Q9UMW8 372 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 COG6Q9Y2V7 657 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 FREM2Q5SZK8 3169 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 MAGEB6P1A0A0J9YX57 407 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 ASB14A6NK59 587 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 CYSRT1A8MQ03 144 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 PRR5-ARHGAP8B1AHC4 643 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 C2CD4DB7Z1M9 353 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 C5orf67F2Z3F1 127 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 STK25O00506 426 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 PER2O15055 1255 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 PARNO95453 639 aaKnown RBP6.73□□□□□ -1.33
HDAC8-212ENST00000421523 CHGBP05060 677 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 AKR1B1P15121 316 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 NPR3P17342 541 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 DNAJB1P25685 340 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 ARHGAP8P85298 464 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 PTPN11Q06124 597 aaPredicted RBP6.73□□□□□ -1.33
HDAC8-212ENST00000421523 CAMK1Q14012 370 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 TTF1Q15361 905 aaPredicted RBP6.73□□□□□ -1.33
HDAC8-212ENST00000421523 DUSP28Q4G0W2 176 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 BRDTQ58F21 947 aaPredicted RBP6.73□□□□□ -1.33
HDAC8-212ENST00000421523 SPECC1Q5M775 1068 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 ZNF618Q5T7W0 954 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 SLC9C2Q5TAH2 1124 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 CLASRPQ8N2M8 674 aaKnown RBP6.73□□□□□ -1.33
HDAC8-212ENST00000421523 LCORLQ8N3X6 602 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 KIFC2Q96AC6 838 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 KIF1BPQ96EK5 621 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 GOPCQ9HD26 462 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 FBXO40Q9UH90 709 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 Q9Y3F1 56 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 NR2E1Q9Y466 385 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 GREB1LQ9C091 1923 aaPredicted RBP6.73□□□□□ -1.33
HDAC8-212ENST00000421523 ZNF532Q9HCE3 1301 aa6.73□□□□□ -1.33
HDAC8-212ENST00000421523 CNOT1A5YKK6 2376 aaKnown RBP6.72□□□□□ -1.33
HDAC8-212ENST00000421523 USP17L12C9JPN9 530 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 USP17L21D6R901 530 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 PRKAB2O43741 272 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 ZBED4O75132 1171 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 RAB11FIP3O75154 756 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 RB1P06400 928 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 PROS1P07225 676 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 LINC00271P0C7V0 271 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 CYP2D6P10635 497 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 EEF2P13639 858 aaKnown RBP6.72□□□□□ -1.33
HDAC8-212ENST00000421523 ATP5JP18859 108 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 RFX1P22670 979 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 ADD2P35612 726 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 VARS2Q5ST30 1063 aaKnown RBP6.72□□□□□ -1.33
HDAC8-212ENST00000421523 SIX5Q8N196 739 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 SUMF1Q8NBK3 374 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 VN1R2Q8NFZ6 395 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 SDR42E1Q8WUS8 393 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 WNT8BQ93098 351 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 TOP1MTQ969P6 601 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 IL17RAQ96F46 866 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 PURBQ96QR8 312 aaKnown RBP6.72□□□□□ -1.33
HDAC8-212ENST00000421523 RTP3Q9BQQ7 232 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 WDR11Q9BZH6 1224 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 TLE6Q9H808 572 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 ERVK-5Q9HDB9 667 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 VTA1Q9NP79 307 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 A1CFQ9NQ94 594 aaKnown RBP6.72□□□□□ -1.33
HDAC8-212ENST00000421523 FBXL21Q9UKT6 434 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 DDX19BQ9UMR2 479 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 LHX6Q9UPM6 363 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 ADGRA3Q8IWK6 1321 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 RAD50Q92878 1312 aa6.72□□□□□ -1.33
HDAC8-212ENST00000421523 LAMA1P25391 3075 aa6.71□□□□□ -1.33
HDAC8-212ENST00000421523 KALRNO60229 2985 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 GOLIM4O00461 696 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 KINO60870 393 aaKnown RBP6.71□□□□□ -1.34
HDAC8-212ENST00000421523 SP9P0CG40 484 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 MS4A1P11836 297 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 UBE3CQ15386 1083 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 C20orf194Q5TEA3 1177 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 C12orf60Q5U649 245 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 LLGL2Q6P1M3 1020 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 TRAF7Q6Q0C0 670 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 LRSAM1Q6UWE0 723 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 CHST13Q8NET6 341 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 COPS5Q92905 334 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 DYNLL2Q96FJ2 89 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 NEK1Q96PY6 1258 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.71□□□□□ -1.34
HDAC8-212ENST00000421523 CRNKL1Q9BZJ0 848 aaKnown RBP6.71□□□□□ -1.34
HDAC8-212ENST00000421523 BOLA2Q9H3K6 86 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 ACAD9Q9H845 621 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 ATP8A2Q9NTI2 1148 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 PAG1Q9NWQ8 432 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 MCM9Q9NXL9 1143 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 PLAGL2Q9UPG8 496 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 RWDD3Q9Y3V2 267 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 EMSYQ7Z589 1322 aa6.71□□□□□ -1.34
HDAC8-212ENST00000421523 FANCMQ8IYD8 2048 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms