RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 ANKS1AQ92625 1134 aa15.03■□□□□ -0
LINC00339-203ENST00000420503 FAM122AQ96E09 287 aa15.03■□□□□ -0
LINC00339-203ENST00000420503 RNF41Q9H4P4 317 aaPredicted RBP15.03■□□□□ -0
LINC00339-203ENST00000420503 SENP2Q9HC62 589 aa15.03■□□□□ -0
LINC00339-203ENST00000420503 PNMA2Q9UL42 364 aa15.03■□□□□ -0
LINC00339-203ENST00000420503 COG5Q9UP83 839 aa15.03■□□□□ -0
LINC00339-203ENST00000420503 ATG2AQ2TAZ0 1938 aa15.02■□□□□ -0
LINC00339-203ENST00000420503 IGHDP01880 384 aa15.02■□□□□ -0
LINC00339-203ENST00000420503 PARP1P09874 1014 aaKnown RBP15.02■□□□□ -0
LINC00339-203ENST00000420503 UBA1P22314 1058 aaKnown RBP15.02■□□□□ -0
LINC00339-203ENST00000420503 HSD17B4P51659 736 aa15.02■□□□□ -0
LINC00339-203ENST00000420503 ERVK-21P61565 698 aa15.02■□□□□ -0
LINC00339-203ENST00000420503 ASPRV1Q53RT3 343 aa15.02■□□□□ -0
LINC00339-203ENST00000420503 CYB5R4Q7L1T6 521 aa15.02■□□□□ -0
LINC00339-203ENST00000420503 CCDC155Q8N6L0 562 aa15.02■□□□□ -0
LINC00339-203ENST00000420503 DBF4BQ8NFT6 615 aa15.02■□□□□ -0
LINC00339-203ENST00000420503 PPTC7Q8NI37 304 aa15.02■□□□□ -0
LINC00339-203ENST00000420503 PDCD2LQ9BRP1 358 aa15.02■□□□□ -0
LINC00339-203ENST00000420503 C1QTNF1Q9BXJ1 281 aa15.02■□□□□ -0
LINC00339-203ENST00000420503 TAF6LQ9Y6J9 622 aa15.02■□□□□ -0
LINC00339-203ENST00000420503 B4DLN1 442 aa15.01□□□□□ -0.01
LINC00339-203ENST00000420503 LGR5O75473 907 aa15.01□□□□□ -0.01
LINC00339-203ENST00000420503 GGPS1O95749 300 aa15.01□□□□□ -0.01
LINC00339-203ENST00000420503 PCP11498 1178 aaKnown RBP15.01□□□□□ -0.01
LINC00339-203ENST00000420503 HOXD8P13378 290 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-203ENST00000420503 IL9P15248 144 aa15.01□□□□□ -0.01
LINC00339-203ENST00000420503 MRPL12P52815 198 aaKnown RBP15.01□□□□□ -0.01
LINC00339-203ENST00000420503 PTK7Q13308 1070 aa15.01□□□□□ -0.01
LINC00339-203ENST00000420503 MYSM1Q5VVJ2 828 aa15.01□□□□□ -0.01
LINC00339-203ENST00000420503 DHX37Q8IY37 1157 aaKnown RBP15.01□□□□□ -0.01
LINC00339-203ENST00000420503 EMID1Q96A84 441 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-203ENST00000420503 SPATA33Q96N06 139 aa15.01□□□□□ -0.01
LINC00339-203ENST00000420503 TGS1Q96RS0 853 aaKnown RBP15.01□□□□□ -0.01
LINC00339-203ENST00000420503 IWS1Q96ST2 819 aa15.01□□□□□ -0.01
LINC00339-203ENST00000420503 RAD9AQ99638 391 aa15.01□□□□□ -0.01
LINC00339-203ENST00000420503 C16orf70Q9BSU1 422 aa15.01□□□□□ -0.01
LINC00339-203ENST00000420503 UBE2ZQ9H832 354 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-203ENST00000420503 MRPL11Q9Y3B7 192 aaKnown RBP15.01□□□□□ -0.01
LINC00339-203ENST00000420503 SUPT16HQ9Y5B9 1047 aaKnown RBP15.01□□□□□ -0.01
LINC00339-203ENST00000420503 ABHD14A-ACY1A0A1B0GW23 586 aa15□□□□□ -0.01
LINC00339-203ENST00000420503 EIF3JO75822 258 aaKnown RBP15□□□□□ -0.01
LINC00339-203ENST00000420503 CTSHP09668 335 aa15□□□□□ -0.01
LINC00339-203ENST00000420503 KCNA5P22460 613 aa15□□□□□ -0.01
LINC00339-203ENST00000420503 THPOP40225 353 aa15□□□□□ -0.01
LINC00339-203ENST00000420503 LAMC2Q13753 1193 aa15□□□□□ -0.01
LINC00339-203ENST00000420503 PGM5Q15124 567 aa15□□□□□ -0.01
LINC00339-203ENST00000420503 SEC23AQ15436 765 aa15□□□□□ -0.01
LINC00339-203ENST00000420503 CELF3Q5SZQ8 465 aaKnown RBP15□□□□□ -0.01
LINC00339-203ENST00000420503 IQCA1Q86XH1 822 aa15□□□□□ -0.01
LINC00339-203ENST00000420503 TRIM50Q86XT4 487 aa15□□□□□ -0.01
LINC00339-203ENST00000420503 HOMER1Q86YM7 354 aa15□□□□□ -0.01
LINC00339-203ENST00000420503 MCF2L2Q86YR7 1114 aa15□□□□□ -0.01
LINC00339-203ENST00000420503 MYOCDQ8IZQ8 938 aa15□□□□□ -0.01
LINC00339-203ENST00000420503 GADD45GIP1Q8TAE8 222 aaPredicted RBP15□□□□□ -0.01
LINC00339-203ENST00000420503 MAD2L2Q9UI95 211 aa15□□□□□ -0.01
LINC00339-203ENST00000420503 TREHO43280 583 aa14.99□□□□□ -0.01
LINC00339-203ENST00000420503 IKBKEQ14164 716 aa14.99□□□□□ -0.01
LINC00339-203ENST00000420503 TMEM31Q5JXX7 168 aa14.99□□□□□ -0.01
LINC00339-203ENST00000420503 SERINC5Q86VE9 423 aa14.99□□□□□ -0.01
LINC00339-203ENST00000420503 FCHSD1Q86WN1 690 aa14.99□□□□□ -0.01
LINC00339-203ENST00000420503 SMC5Q8IY18 1101 aa14.99□□□□□ -0.01
LINC00339-203ENST00000420503 MTMR8Q96EF0 704 aa14.99□□□□□ -0.01
LINC00339-203ENST00000420503 PIGSQ96S52 555 aa14.99□□□□□ -0.01
LINC00339-203ENST00000420503 AMNQ9BXJ7 453 aa14.99□□□□□ -0.01
LINC00339-203ENST00000420503 DIAPH3Q9NSV4 1193 aa14.99□□□□□ -0.01
LINC00339-203ENST00000420503 NLRC5Q86WI3 1866 aa14.98□□□□□ -0.01
LINC00339-203ENST00000420503 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.98□□□□□ -0.01
LINC00339-203ENST00000420503 KLRF2D3W0D1 207 aa14.98□□□□□ -0.01
LINC00339-203ENST00000420503 H3BQ06 376 aaPredicted RBP14.98□□□□□ -0.01
LINC00339-203ENST00000420503 CYTH3O43739 400 aa14.98□□□□□ -0.01
LINC00339-203ENST00000420503 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
LINC00339-203ENST00000420503 GHRHRQ02643 423 aa14.98□□□□□ -0.01
LINC00339-203ENST00000420503 SEMA3FQ13275 785 aa14.98□□□□□ -0.01
LINC00339-203ENST00000420503 VSIG10LQ86VR7 867 aa14.98□□□□□ -0.01
LINC00339-203ENST00000420503 FBXO22Q8NEZ5 403 aa14.98□□□□□ -0.01
LINC00339-203ENST00000420503 PIBF1Q8WXW3 757 aa14.98□□□□□ -0.01
LINC00339-203ENST00000420503 PCDHA1Q9Y5I3 950 aa14.98□□□□□ -0.01
LINC00339-203ENST00000420503 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.97□□□□□ -0.01
LINC00339-203ENST00000420503 RSPH10B2B2RC85 870 aa14.97□□□□□ -0.01
LINC00339-203ENST00000420503 ZBTB5O15062 677 aa14.97□□□□□ -0.01
LINC00339-203ENST00000420503 UPP2O95045 317 aa14.97□□□□□ -0.01
LINC00339-203ENST00000420503 LGALS2P05162 132 aa14.97□□□□□ -0.01
LINC00339-203ENST00000420503 RSPH10BP0C881 870 aa14.97□□□□□ -0.01
LINC00339-203ENST00000420503 SMIM10L2AP0DMW4 78 aa14.97□□□□□ -0.01
LINC00339-203ENST00000420503 SMIM10L2BP0DMW5 78 aa14.97□□□□□ -0.01
LINC00339-203ENST00000420503 HTRA4P83105 476 aaPredicted RBP14.97□□□□□ -0.01
LINC00339-203ENST00000420503 IFIT1BQ5T764 474 aaKnown RBP14.97□□□□□ -0.01
LINC00339-203ENST00000420503 STOX1Q6ZVD7 989 aa14.97□□□□□ -0.01
LINC00339-203ENST00000420503 CHD1LQ86WJ1 897 aa14.97□□□□□ -0.01
LINC00339-203ENST00000420503 UBAC1Q9BSL1 405 aa14.97□□□□□ -0.01
LINC00339-203ENST00000420503 DSCC1Q9BVC3 393 aa14.97□□□□□ -0.01
LINC00339-203ENST00000420503 KATNAL1Q9BW62 490 aa14.97□□□□□ -0.01
LINC00339-203ENST00000420503 PALM3A6NDB9 673 aaPredicted RBP14.96□□□□□ -0.01
LINC00339-203ENST00000420503 CSPG5O95196 566 aa14.96□□□□□ -0.01
LINC00339-203ENST00000420503 HOXC8P31273 242 aa14.96□□□□□ -0.01
LINC00339-203ENST00000420503 MRPS9P82933 396 aaKnown RBP14.96□□□□□ -0.01
LINC00339-203ENST00000420503 SP4Q02446 784 aa14.96□□□□□ -0.01
LINC00339-203ENST00000420503 NUCB1Q02818 461 aa14.96□□□□□ -0.01
LINC00339-203ENST00000420503 LEXMQ3ZCV2 418 aa14.96□□□□□ -0.01
LINC00339-203ENST00000420503 PLEKHG4Q58EX7 1191 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms