RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 RPLP1P05386 114 aaKnown RBP4.88□□□□□ -1.63
CNGA1-203ENST00000420489 RETP07949 1114 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 ELAVL4P26378 380 aaKnown RBP4.88□□□□□ -1.63
CNGA1-203ENST00000420489 NRLP54845 237 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 SUSD4Q5VX71 490 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 CWF19L1Q69YN2 538 aaKnown RBP4.88□□□□□ -1.63
CNGA1-203ENST00000420489 KIF6Q6ZMV9 814 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 SUSD6Q92537 303 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 IFT43Q96FT9 208 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 EPG5Q9HCE0 2579 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 FYB1O15117 783 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 ALBP02768 609 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 CA3P07451 260 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 SNRPA1P09661 255 aaKnown RBP4.88□□□□□ -1.63
CNGA1-203ENST00000420489 PLEKHH3Q7Z736 793 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 MAP4K3Q8IVH8 894 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 MSL3Q8N5Y2 521 aaKnown RBP4.88□□□□□ -1.63
CNGA1-203ENST00000420489 PPP2R3CQ969Q6 453 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 CCDC97Q96F63 343 aaPredicted RBP4.88□□□□□ -1.63
CNGA1-203ENST00000420489 OSBPL6Q9BZF3 934 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 ZMYND15Q9H091 742 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 SLC5A4Q9NY91 659 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 LEMD3Q9Y2U8 911 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 CSRP1P21291 193 aaKnown RBP4.87□□□□□ -1.63
CNGA1-203ENST00000420489 GPLD1P80108 840 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 NAALADL2Q58DX5 795 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 HHIPL2Q6UWX4 724 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 XKR5Q6UX68 686 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 ZBTB44Q8NCP5 570 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 PKNOX2Q96KN3 472 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 FNDC3AQ9Y2H6 1198 aaKnown RBP4.87□□□□□ -1.63
CNGA1-203ENST00000420489 SASH1O94885 1247 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 NFKB1P19838 968 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 HOXA7P31268 230 aaPredicted RBP4.87□□□□□ -1.63
CNGA1-203ENST00000420489 ADCYAP1R1P41586 468 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 ADAM15Q13444 863 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 RRS1Q15050 365 aaKnown RBP4.87□□□□□ -1.63
CNGA1-203ENST00000420489 IL31Q6EBC2 164 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 LOXL4Q96JB6 756 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 NEK1Q96PY6 1258 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 CDCA3Q99618 268 aaPredicted RBP4.87□□□□□ -1.63
CNGA1-203ENST00000420489 ARID3AQ99856 593 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 MUC3BQ9H195 1237 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 KCNQ5Q9NR82 932 aa4.87□□□□□ -1.63
CNGA1-203ENST00000420489 ZNF70Q9UC06 446 aaPredicted RBP4.87□□□□□ -1.63
CNGA1-203ENST00000420489 UBN2Q6ZU65 1347 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 A0A1W2PQ45 241 aaPredicted RBP4.86□□□□□ -1.63
CNGA1-203ENST00000420489 A0A1W2PQY0 241 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 C5orf67F2Z3F1 127 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 H3BNC9 293 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 PDE12Q6L8Q7 609 aaKnown RBP4.86□□□□□ -1.63
CNGA1-203ENST00000420489 TICAM1Q8IUC6 712 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 ABRAQ8N0Z2 381 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 SMCR8Q8TEV9 937 aaPredicted RBP4.86□□□□□ -1.63
CNGA1-203ENST00000420489 ARNTL2Q8WYA1 636 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 LENG1Q96BZ8 264 aaPredicted RBP4.86□□□□□ -1.63
CNGA1-203ENST00000420489 LIN37Q96GY3 246 aaPredicted RBP4.86□□□□□ -1.63
CNGA1-203ENST00000420489 JPH1Q9HDC5 661 aaPredicted RBP4.86□□□□□ -1.63
CNGA1-203ENST00000420489 ANKMY1Q9P2S6 941 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 AFG3L2Q9Y4W6 797 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.86□□□□□ -1.63
CNGA1-203ENST00000420489 PATJQ8NI35 1801 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 CLEC18AA5D8T8 446 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 PSAPP07602 524 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 LTBRP36941 435 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 CHRNA4P43681 627 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 CLEC18BQ6UXF7 455 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 RSPO2Q6UXX9 243 aaPredicted RBP4.86□□□□□ -1.63
CNGA1-203ENST00000420489 DHX32Q7L7V1 743 aaKnown RBP4.86□□□□□ -1.63
CNGA1-203ENST00000420489 ZNF843Q8N446 348 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 CLEC18CQ8NCF0 446 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 SMRP1Q8NCR6 262 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 KLHDC9Q8NEP7 349 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 UPF3AQ9H1J1 476 aaKnown RBP4.86□□□□□ -1.63
CNGA1-203ENST00000420489 ZSCAN32Q9NX65 697 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 CLDND1Q9NY35 253 aa4.86□□□□□ -1.63
CNGA1-203ENST00000420489 TLR7Q9NYK1 1049 aaKnown RBP4.86□□□□□ -1.63
CNGA1-203ENST00000420489 A0A0A0MRY4 1105 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 ARVCFO00192 962 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 RARAP10276 462 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 CNR2P34972 360 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 SOX18P35713 384 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 CCNA1P78396 465 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 PLAURQ03405 335 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 EIF4A2Q14240 407 aaKnown RBP4.85□□□□□ -1.63
CNGA1-203ENST00000420489 LRRFIP1Q32MZ4 808 aaKnown RBP4.85□□□□□ -1.63
CNGA1-203ENST00000420489 C16orf46Q6P387 395 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 ELMSAN1Q6PJG2 1045 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 LBX2Q6XYB7 198 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 RAB44Q7Z6P3 723 aaPredicted RBP4.85□□□□□ -1.63
CNGA1-203ENST00000420489 FAM126BQ8IXS8 530 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 PCSK9Q8NBP7 692 aaKnown RBP4.85□□□□□ -1.63
CNGA1-203ENST00000420489 CLP1Q92989 425 aaKnown RBP4.85□□□□□ -1.63
CNGA1-203ENST00000420489 EDC3Q96F86 508 aaKnown RBP4.85□□□□□ -1.63
CNGA1-203ENST00000420489 MAST4O15021 2626 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 SZT2Q5T011 3432 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 H2AFB1P0C5Y9 115 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 H2AFB2P0C5Z0 115 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 CSF2RAP15509 400 aa4.85□□□□□ -1.63
CNGA1-203ENST00000420489 HNRNPDQ14103 355 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms