RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 HIC1Q14526 733 aa12.76□□□□□ -0.37
SSBP3-206ENST00000420121 DGKDQ16760 1214 aa12.76□□□□□ -0.37
SSBP3-206ENST00000420121 HSDL1Q3SXM5 330 aa12.76□□□□□ -0.37
SSBP3-206ENST00000420121 TSGA10IPQ3SY00 556 aa12.76□□□□□ -0.37
SSBP3-206ENST00000420121 CELF3Q5SZQ8 465 aaKnown RBP12.76□□□□□ -0.37
SSBP3-206ENST00000420121 USP17L6PQ6QN14 398 aa12.76□□□□□ -0.37
SSBP3-206ENST00000420121 SLC17A8Q8NDX2 589 aa12.76□□□□□ -0.37
SSBP3-206ENST00000420121 MYLIPQ8WY64 445 aa12.76□□□□□ -0.37
SSBP3-206ENST00000420121 DHX38Q92620 1227 aaKnown RBP12.76□□□□□ -0.37
SSBP3-206ENST00000420121 RRP36Q96EU6 259 aaKnown RBP12.76□□□□□ -0.37
SSBP3-206ENST00000420121 INPP4AQ96PE3 977 aaPredicted RBP12.76□□□□□ -0.37
SSBP3-206ENST00000420121 LZTS2Q9BRK4 669 aa12.76□□□□□ -0.37
SSBP3-206ENST00000420121 hCG_1642624A0A1W2PR95 340 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 SORBS3O60504 671 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 CDC45O75419 566 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 GGPS1O95749 300 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 IQCF3P0C7M6 154 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 ZNF286BP0CG31 522 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 CASTP20810 708 aaKnown RBP12.75□□□□□ -0.37
SSBP3-206ENST00000420121 ICAM3P32942 547 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 PSEN2P49810 448 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 FUT2Q10981 343 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 GPNMBQ14956 572 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 GRIN2CQ14957 1233 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 KCNV1Q6PIU1 500 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 APOA5Q6Q788 366 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 NFXL1Q6ZNB6 911 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 TMTC3Q6ZXV5 915 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 OTOP2Q7RTS6 562 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 DHX37Q8IY37 1157 aaKnown RBP12.75□□□□□ -0.37
SSBP3-206ENST00000420121 TCEANC2Q96MN5 208 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 NEK1Q96PY6 1258 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 HDAC6Q9UBN7 1215 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 GTF2IRD1Q9UHL9 959 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 BRPF3Q9ULD4 1205 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 TELO2Q9Y4R8 837 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 REV3LO60673 3130 aa12.75□□□□□ -0.37
SSBP3-206ENST00000420121 CNTNAP5Q8WYK1 1306 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 CALM1P0DP23 149 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 CALM2P0DP24 149 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 CALM3P0DP25 149 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 TGFB3P10600 412 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 GNAQP50148 359 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 RBL2Q08999 1139 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 PTGISQ16647 500 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 FANCBQ8NB91 859 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 KCNB2Q92953 911 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 WNT8BQ93098 351 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 TIFAQ96CG3 184 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 C16orf70Q9BSU1 422 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 ZNF576Q9H609 170 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 YBX2Q9Y2T7 364 aaKnown RBP12.74□□□□□ -0.37
SSBP3-206ENST00000420121 SLC12A7Q9Y666 1083 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 SIP14410 1827 aa12.74□□□□□ -0.37
SSBP3-206ENST00000420121 SPATA31C2B4DYI2 1134 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 PPFIA4O75335 1185 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
SSBP3-206ENST00000420121 CHMP4BP1P59074 171 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 MFSD10Q14728 455 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 KIAA0753Q2KHM9 967 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 TRIM71Q2Q1W2 868 aaKnown RBP12.73□□□□□ -0.37
SSBP3-206ENST00000420121 RNF20Q5VTR2 975 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 PCNX4Q63HM2 1172 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 TYW1BQ6NUM6 668 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 TRAF7Q6Q0C0 670 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 DHX32Q7L7V1 743 aaKnown RBP12.73□□□□□ -0.37
SSBP3-206ENST00000420121 DEFB128Q7Z7B8 93 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 MICU3Q86XE3 530 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 RPUSD2Q8IZ73 545 aaKnown RBP12.73□□□□□ -0.37
SSBP3-206ENST00000420121 SPATA33Q96N06 139 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 ALG1Q9BT22 464 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 FAM217BQ9NTX9 383 aaPredicted RBP12.73□□□□□ -0.37
SSBP3-206ENST00000420121 RTEL1Q9NZ71 1219 aa12.73□□□□□ -0.37
SSBP3-206ENST00000420121 MICAL3Q7RTP6 2002 aa12.72□□□□□ -0.37
SSBP3-206ENST00000420121 KAT6AQ92794 2004 aa12.72□□□□□ -0.37
SSBP3-206ENST00000420121 STAM2O75886 525 aa12.72□□□□□ -0.37
SSBP3-206ENST00000420121 PFKMP08237 780 aa12.72□□□□□ -0.37
SSBP3-206ENST00000420121 HOXC8P31273 242 aa12.72□□□□□ -0.37
SSBP3-206ENST00000420121 RFC2P35250 354 aa12.72□□□□□ -0.37
SSBP3-206ENST00000420121 ZNF200P98182 395 aaPredicted RBP12.72□□□□□ -0.37
SSBP3-206ENST00000420121 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
SSBP3-206ENST00000420121 UBE2SQ16763 222 aa12.72□□□□□ -0.37
SSBP3-206ENST00000420121 TCTN1Q2MV58 587 aa12.72□□□□□ -0.37
SSBP3-206ENST00000420121 CCDC82Q8N4S0 544 aa12.72□□□□□ -0.37
SSBP3-206ENST00000420121 SMARCC2Q8TAQ2 1214 aa12.72□□□□□ -0.37
SSBP3-206ENST00000420121 CAGE1Q8TC20 777 aa12.72□□□□□ -0.37
SSBP3-206ENST00000420121 KATNAL1Q9BW62 490 aa12.72□□□□□ -0.37
SSBP3-206ENST00000420121 SEC63Q9UGP8 760 aaKnown RBP12.72□□□□□ -0.37
SSBP3-206ENST00000420121 VCANP13611 3396 aa12.71□□□□□ -0.37
SSBP3-206ENST00000420121 FIBPO43427 364 aa12.71□□□□□ -0.37
SSBP3-206ENST00000420121 LGALS2P05162 132 aa12.71□□□□□ -0.37
SSBP3-206ENST00000420121 CPA1P15085 419 aa12.71□□□□□ -0.37
SSBP3-206ENST00000420121 MYOGP15173 224 aa12.71□□□□□ -0.37
SSBP3-206ENST00000420121 CDC27P30260 824 aa12.71□□□□□ -0.37
SSBP3-206ENST00000420121 RABGGTBP53611 331 aa12.71□□□□□ -0.37
SSBP3-206ENST00000420121 BFSP2Q13515 415 aa12.71□□□□□ -0.37
SSBP3-206ENST00000420121 GNPTABQ3T906 1256 aa12.71□□□□□ -0.37
SSBP3-206ENST00000420121 WWC2Q6AWC2 1192 aa12.71□□□□□ -0.37
SSBP3-206ENST00000420121 METTL7BQ6UX53 244 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms