RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 EFCAB8A8MWE9 144 aa16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 TCP10L2B9ZVM9 353 aa16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 MARSP56192 900 aaKnown RBP16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 KRT83P78385 493 aa16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 FKBP3Q00688 224 aaKnown RBP16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 PPP2R3AQ06190 1150 aa16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 SPIRE1Q08AE8 756 aa16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 COASYQ13057 564 aa16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 ARHGAP29Q52LW3 1261 aa16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 ZNF710Q8N1W2 664 aa16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 JDP2Q8WYK2 163 aa16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 FEZ1Q99689 392 aa16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 TTYH3Q9C0H2 523 aa16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 NUCKS1Q9H1E3 243 aaKnown RBP16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 COL4A5P29400 1685 aa16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 LTBP3Q9NS15 1303 aa16.17■□□□□ 0.18
HLA-DPA1-242ENST00000419277 SOWAHDA6NJG2 315 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 PLA2G4BP0C869 781 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 FCER1AP12319 257 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 IDEP14735 1019 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 DPEP1P16444 411 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 CYLC1P35663 651 aaPredicted RBP16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 CAP2P40123 477 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 GNG11P61952 73 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 TBC1D8BQ0IIM8 1120 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 EDRF1Q3B7T1 1238 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 POTEAQ6S8J7 498 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 KRT26Q7Z3Y9 468 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 CCDC125Q86Z20 511 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 LENG9Q96B70 501 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 TAOK3Q9H2K8 898 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 PANK4Q9NVE7 773 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 KCND2Q9NZV8 630 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 DNM3Q9UQ16 869 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 A0A1W2PRG0 241 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 GCOM1H8Y6P7 765 aaPredicted RBP16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 RAD17O75943 681 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 POLR2MP0CAP2 368 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 FDX1P10109 184 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 HNRNPH3P31942 346 aaKnown RBP16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 ZCWPW2Q504Y3 356 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 CIAPIN1Q6FI81 312 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 MNS1Q8NEH6 495 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 NEK9Q8TD19 979 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 HOOK2Q96ED9 719 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 WDR11Q9BZH6 1224 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 HAUS4Q9H6D7 363 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 TUFT1Q9NNX1 390 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 SLC39A2Q9NP94 309 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 ZNF277Q9NRM2 450 aaPredicted RBP16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 FAM184BQ9ULE4 1060 aa16.16■□□□□ 0.18
HLA-DPA1-242ENST00000419277 TTC26A0AVF1 554 aa16.15■□□□□ 0.18
HLA-DPA1-242ENST00000419277 PES1O00541 588 aaKnown RBP16.15■□□□□ 0.18
HLA-DPA1-242ENST00000419277 RBM10P98175 930 aaKnown RBP16.15■□□□□ 0.18
HLA-DPA1-242ENST00000419277 GHRHRQ02643 423 aa16.15■□□□□ 0.18
HLA-DPA1-242ENST00000419277 VWA3BQ502W6 1294 aa16.15■□□□□ 0.18
HLA-DPA1-242ENST00000419277 PRR16Q569H4 304 aa16.15■□□□□ 0.18
HLA-DPA1-242ENST00000419277 RAD9BQ6WBX8 426 aa16.15■□□□□ 0.18
HLA-DPA1-242ENST00000419277 SYT2Q8N9I0 419 aaPredicted RBP16.15■□□□□ 0.18
HLA-DPA1-242ENST00000419277 CCDC94Q9BW85 323 aaPredicted RBP16.15■□□□□ 0.18
HLA-DPA1-242ENST00000419277 SEMA6BQ9H3T3 888 aa16.15■□□□□ 0.18
HLA-DPA1-242ENST00000419277 KIAA1024Q9UPX6 916 aa16.15■□□□□ 0.18
HLA-DPA1-242ENST00000419277 B4DLN1 442 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 WDR46O15213 610 aaKnown RBP16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 POLD1P28340 1107 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 ZNF76P36508 570 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 SLC12A3P55017 1021 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 ZNF280AP59817 542 aaPredicted RBP16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 GOLGA8FQ08AF8 430 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 GOLGA8DPQ0D2H9 430 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 KIF4BQ2VIQ3 1234 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 USH1GQ495M9 461 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 GLIPR1L2Q4G1C9 344 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 MIIPQ5JXC2 388 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 LRRC55Q6ZSA7 311 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 DYMQ7RTS9 669 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 ZC3H3Q8IXZ2 948 aaKnown RBP16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CPLX3Q8WVH0 158 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 MAF1Q9H063 256 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 NDST4Q9H3R1 872 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 ARGLU1Q9NWB6 273 aaPredicted RBP16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CLRN2A0PK11 232 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 OPLAHO14841 1288 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 NDUFA10O95299 355 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 GAP43P17677 238 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CYP11B2P19099 503 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 MAP3K9P80192 1104 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 PPP2R5CQ13362 524 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 DALRD3Q5D0E6 543 aaKnown RBP16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 KCNK18Q7Z418 384 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 GPBP1Q86WP2 473 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CREBRFQ8IUR6 639 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 KIFC2Q96AC6 838 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 NUDT12Q9BQG2 462 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 TSGA10Q9BZW7 698 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 VEZTQ9HBM0 779 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 COL4A3BPQ9Y5P4 624 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 MRFAP1Q9Y605 127 aa16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 EPN1Q9Y6I3 576 aaPredicted RBP16.14■□□□□ 0.17
HLA-DPA1-242ENST00000419277 UBE4BO95155 1302 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms