RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 NBPF20Q3BBV1 942 aa23.32■■□□□ 1.32
GTF3A-202ENST00000419181 TRPV6Q9H1D0 765 aa23.32■■□□□ 1.32
GTF3A-202ENST00000419181 RTEL1Q9NZ71 1219 aa23.32■■□□□ 1.32
GTF3A-202ENST00000419181 SPATA31C2B4DYI2 1134 aa23.31■■□□□ 1.32
GTF3A-202ENST00000419181 PRPF3O43395 683 aaKnown RBP23.31■■□□□ 1.32
GTF3A-202ENST00000419181 FIBPO43427 364 aa23.31■■□□□ 1.32
GTF3A-202ENST00000419181 HOXD8P13378 290 aaPredicted RBP23.31■■□□□ 1.32
GTF3A-202ENST00000419181 SCG2P13521 617 aa23.31■■□□□ 1.32
GTF3A-202ENST00000419181 ADCY7P51828 1080 aa23.31■■□□□ 1.32
GTF3A-202ENST00000419181 PKN1Q16512 942 aa23.31■■□□□ 1.32
GTF3A-202ENST00000419181 LRIT3Q3SXY7 679 aa23.31■■□□□ 1.32
GTF3A-202ENST00000419181 NFRKBQ6P4R8 1299 aa23.31■■□□□ 1.32
GTF3A-202ENST00000419181 LRCH3Q96II8 777 aa23.31■■□□□ 1.32
GTF3A-202ENST00000419181 NCOA5Q9HCD5 579 aaKnown RBP23.31■■□□□ 1.32
GTF3A-202ENST00000419181 PDRG1Q9NUG6 133 aa23.31■■□□□ 1.32
GTF3A-202ENST00000419181 PCDHA6Q9UN73 950 aa23.31■■□□□ 1.32
GTF3A-202ENST00000419181 PCDHA8Q9Y5H6 950 aa23.31■■□□□ 1.32
GTF3A-202ENST00000419181 DOCK5Q9H7D0 1870 aa23.3■■□□□ 1.32
GTF3A-202ENST00000419181 EIF5BO60841 1220 aaKnown RBP23.3■■□□□ 1.32
GTF3A-202ENST00000419181 IFNAR1P17181 557 aa23.3■■□□□ 1.32
GTF3A-202ENST00000419181 CCT2P78371 535 aaKnown RBP23.3■■□□□ 1.32
GTF3A-202ENST00000419181 HSDL1Q3SXM5 330 aa23.3■■□□□ 1.32
GTF3A-202ENST00000419181 KAT2BQ92831 832 aa23.3■■□□□ 1.32
GTF3A-202ENST00000419181 PHKBQ93100 1093 aa23.3■■□□□ 1.32
GTF3A-202ENST00000419181 IL17RAQ96F46 866 aa23.3■■□□□ 1.32
GTF3A-202ENST00000419181 ZNF274Q96GC6 653 aaPredicted RBP23.3■■□□□ 1.32
GTF3A-202ENST00000419181 SPATA33Q96N06 139 aa23.3■■□□□ 1.32
GTF3A-202ENST00000419181 RNF26Q9BY78 433 aaPredicted RBP23.3■■□□□ 1.32
GTF3A-202ENST00000419181 SMCO2A6NFE2 343 aa23.29■■□□□ 1.32
GTF3A-202ENST00000419181 FPGSQ05932 587 aa23.29■■□□□ 1.32
GTF3A-202ENST00000419181 MFSD5Q6N075 450 aa23.29■■□□□ 1.32
GTF3A-202ENST00000419181 PPP1R12CQ9BZL4 782 aa23.29■■□□□ 1.32
GTF3A-202ENST00000419181 GLT8D2Q9H1C3 349 aa23.29■■□□□ 1.32
GTF3A-202ENST00000419181 BCAS3Q9H6U6 928 aa23.29■■□□□ 1.32
GTF3A-202ENST00000419181 TRMT13Q9NUP7 481 aaKnown RBP23.29■■□□□ 1.32
GTF3A-202ENST00000419181 ESYT2A0FGR8 921 aa23.28■■□□□ 1.32
GTF3A-202ENST00000419181 SORBS3O60504 671 aa23.28■■□□□ 1.32
GTF3A-202ENST00000419181 PPFIA4O75335 1185 aa23.28■■□□□ 1.32
GTF3A-202ENST00000419181 F2P00734 622 aa23.28■■□□□ 1.32
GTF3A-202ENST00000419181 ITGB5P18084 799 aa23.28■■□□□ 1.32
GTF3A-202ENST00000419181 CLK2P49760 499 aaKnown RBP23.28■■□□□ 1.32
GTF3A-202ENST00000419181 EPHB4P54760 987 aa23.28■■□□□ 1.32
GTF3A-202ENST00000419181 PTPN11Q06124 597 aaPredicted RBP23.28■■□□□ 1.32
GTF3A-202ENST00000419181 NEDD9Q14511 834 aa23.28■■□□□ 1.32
GTF3A-202ENST00000419181 NLRX1Q86UT6 975 aa23.28■■□□□ 1.32
GTF3A-202ENST00000419181 PPP1R13LQ8WUF5 828 aa23.28■■□□□ 1.32
GTF3A-202ENST00000419181 GPRASP2Q96D09 838 aa23.28■■□□□ 1.32
GTF3A-202ENST00000419181 LARP6Q9BRS8 491 aaKnown RBP23.28■■□□□ 1.32
GTF3A-202ENST00000419181 HIPK3Q9H422 1215 aa23.28■■□□□ 1.32
GTF3A-202ENST00000419181 EHMT1Q9H9B1 1298 aa23.28■■□□□ 1.32
GTF3A-202ENST00000419181 MLXIPQ9HAP2 919 aa23.28■■□□□ 1.32
GTF3A-202ENST00000419181 SEC24BO95487 1268 aa23.27■■□□□ 1.32
GTF3A-202ENST00000419181 FOSP01100 380 aaPredicted RBP23.27■■□□□ 1.32
GTF3A-202ENST00000419181 SUPT20HL2P0C7V6 817 aa23.27■■□□□ 1.32
GTF3A-202ENST00000419181 ZNF286BP0CG31 522 aa23.27■■□□□ 1.32
GTF3A-202ENST00000419181 SHHQ15465 462 aa23.27■■□□□ 1.32
GTF3A-202ENST00000419181 FAM47CQ5HY64 1035 aa23.27■■□□□ 1.32
GTF3A-202ENST00000419181 C9orf50Q5SZB4 431 aa23.27■■□□□ 1.32
GTF3A-202ENST00000419181 METTL7BQ6UX53 244 aa23.27■■□□□ 1.32
GTF3A-202ENST00000419181 SENP7Q9BQF6 1050 aa23.27■■□□□ 1.32
GTF3A-202ENST00000419181 NOC4LQ9BVI4 516 aaKnown RBP23.27■■□□□ 1.32
GTF3A-202ENST00000419181 ZMYND12Q9H0C1 365 aa23.27■■□□□ 1.32
GTF3A-202ENST00000419181 UBIAD1Q9Y5Z9 338 aa23.27■■□□□ 1.32
GTF3A-202ENST00000419181 PPFIA3O75145 1194 aa23.26■■□□□ 1.31
GTF3A-202ENST00000419181 AKAP17AQ02040 695 aaKnown RBP23.26■■□□□ 1.31
GTF3A-202ENST00000419181 AP3B2Q13367 1082 aa23.26■■□□□ 1.31
GTF3A-202ENST00000419181 SESTD1Q86VW0 696 aa23.26■■□□□ 1.31
GTF3A-202ENST00000419181 CCDC12Q8WUD4 166 aaPredicted RBP23.26■■□□□ 1.31
GTF3A-202ENST00000419181 CDHR1Q96JP9 859 aa23.26■■□□□ 1.31
GTF3A-202ENST00000419181 KATNAL1Q9BW62 490 aa23.26■■□□□ 1.31
GTF3A-202ENST00000419181 SLC26A6Q9BXS9 759 aa23.26■■□□□ 1.31
GTF3A-202ENST00000419181 ANO3Q9BYT9 981 aa23.26■■□□□ 1.31
GTF3A-202ENST00000419181 UMODL1Q5DID0 1318 aa23.26■■□□□ 1.31
GTF3A-202ENST00000419181 LAMA2P24043 3122 aaKnown RBP23.26■■□□□ 1.31
GTF3A-202ENST00000419181 HAS3O00219 553 aa23.25■■□□□ 1.31
GTF3A-202ENST00000419181 CYP2C18P33260 490 aa23.25■■□□□ 1.31
GTF3A-202ENST00000419181 CYFIP1Q7L576 1253 aa23.25■■□□□ 1.31
GTF3A-202ENST00000419181 TMEM199Q8N511 208 aa23.25■■□□□ 1.31
GTF3A-202ENST00000419181 PGBD1Q96JS3 809 aa23.25■■□□□ 1.31
GTF3A-202ENST00000419181 TMEM260Q9NX78 707 aa23.25■■□□□ 1.31
GTF3A-202ENST00000419181 CYP2C9P11712 490 aa23.24■■□□□ 1.31
GTF3A-202ENST00000419181 CSF2RAP15509 400 aa23.24■■□□□ 1.31
GTF3A-202ENST00000419181 SREBF1P36956 1147 aa23.24■■□□□ 1.31
GTF3A-202ENST00000419181 PSEN2P49810 448 aa23.24■■□□□ 1.31
GTF3A-202ENST00000419181 CHMP4BP1P59074 171 aa23.24■■□□□ 1.31
GTF3A-202ENST00000419181 MTMR1Q13613 665 aa23.24■■□□□ 1.31
GTF3A-202ENST00000419181 C16orf70Q9BSU1 422 aa23.24■■□□□ 1.31
GTF3A-202ENST00000419181 JADE2Q9NQC1 790 aa23.24■■□□□ 1.31
GTF3A-202ENST00000419181 NOP56O00567 594 aaKnown RBP23.23■■□□□ 1.31
GTF3A-202ENST00000419181 CPLX1O14810 134 aa23.23■■□□□ 1.31
GTF3A-202ENST00000419181 ATP9AO75110 1047 aa23.23■■□□□ 1.31
GTF3A-202ENST00000419181 KCNA2P16389 499 aa23.23■■□□□ 1.31
GTF3A-202ENST00000419181 STK3Q13188 491 aa23.23■■□□□ 1.31
GTF3A-202ENST00000419181 PPIGQ13427 754 aaKnown RBP eCLIP23.23■■□□□ 1.31
GTF3A-202ENST00000419181 MFSD10Q14728 455 aa23.23■■□□□ 1.31
GTF3A-202ENST00000419181 KIAA0753Q2KHM9 967 aa23.23■■□□□ 1.31
GTF3A-202ENST00000419181 TRIM22Q8IYM9 498 aa23.23■■□□□ 1.31
GTF3A-202ENST00000419181 GIMAP8Q8ND71 665 aaPredicted RBP23.23■■□□□ 1.31
GTF3A-202ENST00000419181 GPR20Q99678 358 aa23.23■■□□□ 1.31
GTF3A-202ENST00000419181 WNT8AQ9H1J5 351 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms