RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 STEAP3Q658P3 488 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 TMEM132EQ6IEE7 984 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 C16orf59Q7L2K0 433 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 OTOP3Q7RTS5 596 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 TMC6Q7Z403 805 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 DDX53Q86TM3 631 aaKnown RBP3.79□□□□□ -1.8
VPS41-206ENST00000418457 DHX37Q8IY37 1157 aaKnown RBP3.79□□□□□ -1.8
VPS41-206ENST00000418457 FBXO15Q8NCQ5 510 aaPredicted RBP3.79□□□□□ -1.8
VPS41-206ENST00000418457 PIP4K2CQ8TBX8 421 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 PANK1Q8TE04 598 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.79□□□□□ -1.8
VPS41-206ENST00000418457 MFSD3Q96ES6 412 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 TSPAN17Q96FV3 270 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 PCGF6Q9BYE7 350 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 KRTAP4-6Q9BYQ5 205 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 SLC6A20Q9NP91 592 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 CATSPERZQ9NTU4 200 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 SIRT5Q9NXA8 310 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 ZNF652Q9Y2D9 606 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 COQ6Q9Y2Z9 468 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 TNPO3Q9Y5L0 923 aaKnown RBP3.79□□□□□ -1.8
VPS41-206ENST00000418457 HCFC2Q9Y5Z7 792 aa3.79□□□□□ -1.8
VPS41-206ENST00000418457 LOC105371045A0A1W2PR82 267 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 CCDC66A2RUB6 948 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 NPTXRO95502 500 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 CKMP06732 381 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 COL6A2P12110 1019 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 ZNF460Q14592 562 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 CYP4F22Q6NT55 531 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 ZCCHC8Q6NZY4 707 aaKnown RBP3.78□□□□□ -1.8
VPS41-206ENST00000418457 CNNM4Q6P4Q7 775 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 UBE2R2Q712K3 238 aaPredicted RBP3.78□□□□□ -1.8
VPS41-206ENST00000418457 MILR1Q7Z6M3 343 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 LRRTM3Q86VH5 581 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 PHOSPHO1Q8TCT1 267 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 ALG3Q92685 438 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 CELF4Q9BZC1 486 aaKnown RBP3.78□□□□□ -1.8
VPS41-206ENST00000418457 MCOLN1Q9GZU1 580 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 SMOC1Q9H4F8 434 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 PALD1Q9ULE6 856 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 RNF114Q9Y508 228 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 NUB1Q9Y5A7 615 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 PCDHB4Q9Y5E5 795 aa3.78□□□□□ -1.8
VPS41-206ENST00000418457 TEX51A0A1B0GUA7 166 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 MYOCOSA0A1B0GUC4 107 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 NKRFO15226 690 aaKnown RBP eCLIP3.77□□□□□ -1.81
VPS41-206ENST00000418457 PAX4O43316 350 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 SEMA7AO75326 666 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 TADA3O75528 432 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 FARP2O94887 1054 aaPredicted RBP3.77□□□□□ -1.81
VPS41-206ENST00000418457 JMJD7P0C870 316 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 MYCLP1P12525 358 aaPredicted RBP3.77□□□□□ -1.81
VPS41-206ENST00000418457 PDE6AP16499 860 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 KCNA6P17658 529 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 KRT15P19012 456 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 ZNF200P98182 395 aaPredicted RBP3.77□□□□□ -1.81
VPS41-206ENST00000418457 GPR19Q15760 415 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 CFAP100Q494V2 611 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 TM4SF20Q53R12 229 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 HABP4Q5JVS0 413 aaKnown RBP3.77□□□□□ -1.81
VPS41-206ENST00000418457 PIK3R6Q5UE93 754 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 ABHD17CQ6PCB6 329 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 EP400NLQ6ZTU2 488 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 AHI1Q8N157 1196 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 CISD2Q8N5K1 135 aaKnown RBP3.77□□□□□ -1.81
VPS41-206ENST00000418457 IGSF22Q8N9C0 903 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 UHMK1Q8TAS1 419 aaKnown RBP3.77□□□□□ -1.81
VPS41-206ENST00000418457 BCAS3Q9H6U6 928 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 CNTD2Q9H8S5 307 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 KCNK12Q9HB15 430 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 SAMD15Q9P1V8 674 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 MYOTQ9UBF9 498 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 DSEQ9UL01 958 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 CBLCQ9ULV8 474 aa3.77□□□□□ -1.81
VPS41-206ENST00000418457 TCRBV5S2A0A599 114 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 TCRBV5S4A2TA0A5A2 114 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 M0R2C6 588 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 SLC27A2O14975 620 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 KPNA6O60684 536 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 GLRX3O76003 335 aaKnown RBP3.76□□□□□ -1.81
VPS41-206ENST00000418457 CANXP27824 592 aaKnown RBP3.76□□□□□ -1.81
VPS41-206ENST00000418457 CDR1P51861 262 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 NEK4P51957 841 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 JAM2P57087 298 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 LACTBP83111 547 aaPredicted RBP3.76□□□□□ -1.81
VPS41-206ENST00000418457 TARBP2Q15633 366 aaKnown RBP3.76□□□□□ -1.81
VPS41-206ENST00000418457 TMEM177Q53S58 311 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 CDCA2Q69YH5 1023 aaPredicted RBP3.76□□□□□ -1.81
VPS41-206ENST00000418457 ARHGAP36Q6ZRI8 547 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 OVCH1Q7RTY7 1134 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 OSTM1Q86WC4 334 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 AMIGO3Q86WK7 504 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 LDHDQ86WU2 507 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 TRIM48Q8IWZ4 208 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 NLGN4XQ8N0W4 816 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 PPM1KQ8N3J5 372 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 C2orf69Q8N8R5 385 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 DDX1Q92499 740 aaKnown RBP3.76□□□□□ -1.81
VPS41-206ENST00000418457 KCNN1Q92952 543 aa3.76□□□□□ -1.81
VPS41-206ENST00000418457 WNK4Q96J92 1243 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms