RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 UHMK1Q8TAS1 419 aaKnown RBP12.17□□□□□ -0.46
PTCH1-205ENST00000418258 RPGRIP1Q96KN7 1286 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 GOLGA8QA0A0J9YX86 632 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 GOLGA8OA6NCC3 632 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 GOLGA8NF8WBI6 632 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 BBOF1Q8ND07 529 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 IL17REQ8NFR9 667 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 RASGRP4Q8TDF6 673 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 FAM49AQ9H0Q0 323 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-205ENST00000418258 F8W8V4 182 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 GNAT1P11488 350 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 ZNF18P17022 549 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 SOX5P35711 763 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 NDUFA8P51970 172 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 ZNF827Q17R98 1081 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 DHX36Q9H2U1 1008 aaKnown RBP12.16□□□□□ -0.46
PTCH1-205ENST00000418258 TMEM2Q9UHN6 1383 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 GPC4O75487 556 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 DDIT3P35638 169 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 ASPHQ12797 758 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 SNX1Q13596 522 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 CCDC38Q502W7 563 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 TRIM11Q96F44 468 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 CALN1Q9BXU9 219 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 USP44Q9H0E7 712 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 FBXW4P57775 412 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 RWDD4Q6NW29 188 aaKnown RBP12.16□□□□□ -0.46
PTCH1-205ENST00000418258 ARMCX2Q7L311 632 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 C17orf53Q8N3J3 647 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-205ENST00000418258 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 FIS1Q9Y3D6 152 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 ORC6Q9Y5N6 252 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 CLIC4Q9Y696 253 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 KDM5CP41229 1560 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 TTC4O95801 387 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 CD58P19256 250 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 NFX1Q12986 1120 aaKnown RBP12.16□□□□□ -0.46
PTCH1-205ENST00000418258 EAF2Q96CJ1 260 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-205ENST00000418258 TTC25Q96NG3 672 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 MTRQ99707 1265 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 SCARA5Q6ZMJ2 495 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 ARHGEF18Q6ZSZ5 1173 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 THEM5Q8N1Q8 247 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 LRRC8CQ8TDW0 803 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 FAM81BQ96LP2 452 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 TMEM206Q9H813 350 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 GNGT2O14610 69 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 OPHN1O60890 802 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 FAM186BQ8IYM0 893 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 RUNDC3BQ96NL0 473 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 MAGEF1Q9HAY2 307 aa12.16□□□□□ -0.46
PTCH1-205ENST00000418258 A0A1B0GUA9 196 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 C21orf2O43822 256 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 SMIM24O75264 130 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 H2AFZP0C0S5 128 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 USP17L2Q6R6M4 530 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 H2AFVQ71UI9 128 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 PRPF38AQ8NAV1 312 aaKnown RBP12.15□□□□□ -0.46
PTCH1-205ENST00000418258 CDC26Q8NHZ8 85 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 TBCKQ8TEA7 893 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 COA7Q96BR5 231 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 FGD4Q96M96 766 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 GCNT4Q9P109 453 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 NFKBIAP25963 317 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 EEF1GP26641 437 aaKnown RBP12.15□□□□□ -0.46
PTCH1-205ENST00000418258 UBE3CQ15386 1083 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 ARL13BQ3SXY8 428 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 DARS2Q6PI48 645 aaKnown RBP12.15□□□□□ -0.46
PTCH1-205ENST00000418258 MMTAG2Q9BU76 263 aaKnown RBP12.15□□□□□ -0.46
PTCH1-205ENST00000418258 SUDS3Q9H7L9 328 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-205ENST00000418258 DENND3A2RUS2 1198 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 PFKFB2O60825 505 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 AFPP02771 609 aaKnown RBP12.15□□□□□ -0.46
PTCH1-205ENST00000418258 EPS15L1Q9UBC2 864 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 STMN1P16949 149 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 PUS3Q9BZE2 481 aaKnown RBP12.15□□□□□ -0.46
PTCH1-205ENST00000418258 EHHADHQ08426 723 aa12.15□□□□□ -0.46
PTCH1-205ENST00000418258 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.15□□□□□ -0.46
PTCH1-205ENST00000418258 SNAP25P60880 206 aa12.15□□□□□ -0.47
PTCH1-205ENST00000418258 SCRN1Q12765 414 aa12.15□□□□□ -0.47
PTCH1-205ENST00000418258 FASTKD5Q7L8L6 764 aaKnown RBP12.15□□□□□ -0.47
PTCH1-205ENST00000418258 TRIML1Q8N9V2 468 aa12.15□□□□□ -0.47
PTCH1-205ENST00000418258 MAGOHBQ96A72 148 aaKnown RBP12.15□□□□□ -0.47
PTCH1-205ENST00000418258 AK8Q96MA6 479 aa12.15□□□□□ -0.47
PTCH1-205ENST00000418258 USP28Q96RU2 1077 aa12.15□□□□□ -0.47
PTCH1-205ENST00000418258 RASSF4Q9H2L5 321 aa12.15□□□□□ -0.47
PTCH1-205ENST00000418258 MRPL46Q9H2W6 279 aaKnown RBP12.15□□□□□ -0.47
PTCH1-205ENST00000418258 UBE2TQ9NPD8 197 aaPredicted RBP12.15□□□□□ -0.47
PTCH1-205ENST00000418258 PIM2Q9P1W9 311 aa12.15□□□□□ -0.47
PTCH1-205ENST00000418258 ZBTB1Q9Y2K1 713 aa12.15□□□□□ -0.47
PTCH1-205ENST00000418258 CIAO1O76071 339 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 HOXA13P31271 388 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-205ENST00000418258 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-205ENST00000418258 DNAJC24Q6P3W2 148 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 NDUFAF2Q8N183 169 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 N4BP2L2Q92802 583 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-205ENST00000418258 TUBGCP2Q9BSJ2 902 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 SESN3P58005 492 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 RC3H1Q5TC82 1133 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms