RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 STOX1Q6ZVD7 989 aa20.95■□□□□ 0.94
VCP-202ENST00000417448 MMP3P08254 477 aa20.94■□□□□ 0.94
VCP-202ENST00000417448 MKRN4PQ13434 485 aaPredicted RBP20.94■□□□□ 0.94
VCP-202ENST00000417448 COL9A3Q14050 684 aaPredicted RBP20.94■□□□□ 0.94
VCP-202ENST00000417448 COL19A1Q14993 1142 aa20.94■□□□□ 0.94
VCP-202ENST00000417448 AFG1LQ8WV93 481 aa20.94■□□□□ 0.94
VCP-202ENST00000417448 WNT8BQ93098 351 aa20.94■□□□□ 0.94
VCP-202ENST00000417448 PARNO95453 639 aaKnown RBP20.93■□□□□ 0.94
VCP-202ENST00000417448 IRS1P35568 1242 aa20.93■□□□□ 0.94
VCP-202ENST00000417448 RPS6P62753 249 aaKnown RBP20.93■□□□□ 0.94
VCP-202ENST00000417448 IKBKEQ14164 716 aa20.93■□□□□ 0.94
VCP-202ENST00000417448 CCDC96Q2M329 555 aa20.93■□□□□ 0.94
VCP-202ENST00000417448 RNF207Q6ZRF8 634 aa20.93■□□□□ 0.94
VCP-202ENST00000417448 CYB5R4Q7L1T6 521 aa20.93■□□□□ 0.94
VCP-202ENST00000417448 SP7Q8TDD2 431 aaPredicted RBP20.93■□□□□ 0.94
VCP-202ENST00000417448 PABPC5Q96DU9 382 aaKnown RBP20.93■□□□□ 0.94
VCP-202ENST00000417448 RNF41Q9H4P4 317 aaPredicted RBP20.93■□□□□ 0.94
VCP-202ENST00000417448 PRKAG3Q9UGI9 489 aa20.93■□□□□ 0.94
VCP-202ENST00000417448 GTF2IRD1Q9UHL9 959 aa20.93■□□□□ 0.94
VCP-202ENST00000417448 INSL6Q9Y581 213 aa20.93■□□□□ 0.94
VCP-202ENST00000417448 E7EWF7 191 aa20.92■□□□□ 0.94
VCP-202ENST00000417448 SLC27A2O14975 620 aa20.92■□□□□ 0.94
VCP-202ENST00000417448 HTRA4P83105 476 aaPredicted RBP20.92■□□□□ 0.94
VCP-202ENST00000417448 TRIM71Q2Q1W2 868 aaKnown RBP20.92■□□□□ 0.94
VCP-202ENST00000417448 EPC2Q52LR7 807 aa20.92■□□□□ 0.94
VCP-202ENST00000417448 TCEAL5Q5H9L2 206 aa20.92■□□□□ 0.94
VCP-202ENST00000417448 CREB3L3Q68CJ9 461 aa20.92■□□□□ 0.94
VCP-202ENST00000417448 CCDC62Q6P9F0 684 aa20.92■□□□□ 0.94
VCP-202ENST00000417448 BTNL9Q6UXG8 535 aa20.92■□□□□ 0.94
VCP-202ENST00000417448 CHST3Q7LGC8 479 aa20.92■□□□□ 0.94
VCP-202ENST00000417448 ADHFE1Q8IWW8 467 aa20.92■□□□□ 0.94
VCP-202ENST00000417448 BANK1Q8NDB2 785 aa20.92■□□□□ 0.94
VCP-202ENST00000417448 ZSWIM5Q9P217 1185 aa20.92■□□□□ 0.94
VCP-202ENST00000417448 MYO15AQ9UKN7 3530 aa20.92■□□□□ 0.94
VCP-202ENST00000417448 RALGAPA2Q2PPJ7 1873 aa20.92■□□□□ 0.94
VCP-202ENST00000417448 EFCAB14O75071 495 aa20.91■□□□□ 0.94
VCP-202ENST00000417448 NOVP48745 357 aa20.91■□□□□ 0.94
VCP-202ENST00000417448 ARHGAP1Q07960 439 aa20.91■□□□□ 0.94
VCP-202ENST00000417448 NECTIN1Q15223 517 aa20.91■□□□□ 0.94
VCP-202ENST00000417448 TIGD5Q53EQ6 642 aa20.91■□□□□ 0.94
VCP-202ENST00000417448 ZNF618Q5T7W0 954 aa20.91■□□□□ 0.94
VCP-202ENST00000417448 SYDE2Q5VT97 1194 aa20.91■□□□□ 0.94
VCP-202ENST00000417448 PRSS33Q8NF86 280 aa20.91■□□□□ 0.94
VCP-202ENST00000417448 DCAF4Q8WV16 495 aa20.91■□□□□ 0.94
VCP-202ENST00000417448 ESR2Q92731 530 aa20.91■□□□□ 0.94
VCP-202ENST00000417448 HDAC6Q9UBN7 1215 aa20.91■□□□□ 0.94
VCP-202ENST00000417448 MYH7BA7E2Y1 1941 aa20.9■□□□□ 0.94
VCP-202ENST00000417448 FRMPD2Q68DX3 1309 aaPredicted RBP20.9■□□□□ 0.94
VCP-202ENST00000417448 LTBRP36941 435 aa20.9■□□□□ 0.94
VCP-202ENST00000417448 PTPROQ16827 1216 aa20.9■□□□□ 0.94
VCP-202ENST00000417448 LY6KQ17RY6 165 aa20.9■□□□□ 0.94
VCP-202ENST00000417448 TMEM47Q9BQJ4 181 aa20.9■□□□□ 0.94
VCP-202ENST00000417448 MUTYHQ9UIF7 546 aa20.9■□□□□ 0.94
VCP-202ENST00000417448 H3BNC9 293 aa20.89■□□□□ 0.93
VCP-202ENST00000417448 EP400NLQ6ZTU2 488 aa20.89■□□□□ 0.93
VCP-202ENST00000417448 DNERQ8NFT8 737 aa20.89■□□□□ 0.93
VCP-202ENST00000417448 MFSD14AQ96MC6 490 aa20.89■□□□□ 0.93
VCP-202ENST00000417448 KRT23Q9C075 422 aa20.89■□□□□ 0.93
VCP-202ENST00000417448 KMT2EQ8IZD2 1858 aa20.89■□□□□ 0.93
VCP-202ENST00000417448 COL4A6Q14031 1691 aa20.89■□□□□ 0.93
VCP-202ENST00000417448 ZDBF2Q9HCK1 2354 aa20.88■□□□□ 0.93
VCP-202ENST00000417448 LGR5O75473 907 aa20.88■□□□□ 0.93
VCP-202ENST00000417448 ZNF200P98182 395 aaPredicted RBP20.88■□□□□ 0.93
VCP-202ENST00000417448 HIC1Q14526 733 aa20.88■□□□□ 0.93
VCP-202ENST00000417448 PPP4R3BQ5MIZ7 849 aa20.88■□□□□ 0.93
VCP-202ENST00000417448 RASEFQ8IZ41 740 aa20.88■□□□□ 0.93
VCP-202ENST00000417448 MYOCDQ8IZQ8 938 aa20.88■□□□□ 0.93
VCP-202ENST00000417448 GPCPD1Q9NPB8 672 aa20.88■□□□□ 0.93
VCP-202ENST00000417448 CLDND1Q9NY35 253 aa20.88■□□□□ 0.93
VCP-202ENST00000417448 GH1P01241 217 aa20.87■□□□□ 0.93
VCP-202ENST00000417448 PCP11498 1178 aaKnown RBP20.87■□□□□ 0.93
VCP-202ENST00000417448 PTK7Q13308 1070 aa20.87■□□□□ 0.93
VCP-202ENST00000417448 GPM6BQ13491 265 aa20.87■□□□□ 0.93
VCP-202ENST00000417448 HERC4Q5GLZ8 1057 aaPredicted RBP20.87■□□□□ 0.93
VCP-202ENST00000417448 IER5LQ5T953 404 aa20.87■□□□□ 0.93
VCP-202ENST00000417448 C7orf31Q8N865 590 aa20.87■□□□□ 0.93
VCP-202ENST00000417448 DBF4BQ8NFT6 615 aa20.87■□□□□ 0.93
VCP-202ENST00000417448 MPHOSPH6Q99547 160 aaKnown RBP20.87■□□□□ 0.93
VCP-202ENST00000417448 NSUN3Q9H649 340 aaKnown RBP20.87■□□□□ 0.93
VCP-202ENST00000417448 SENP2Q9HC62 589 aa20.87■□□□□ 0.93
VCP-202ENST00000417448 TCP11L1Q9NUJ3 509 aa20.87■□□□□ 0.93
VCP-202ENST00000417448 FAM50BQ9Y247 325 aa20.87■□□□□ 0.93
VCP-202ENST00000417448 SPTBN4Q9H254 2564 aa20.86■□□□□ 0.93
VCP-202ENST00000417448 AMHP03971 560 aa20.86■□□□□ 0.93
VCP-202ENST00000417448 CASTP20810 708 aaKnown RBP20.86■□□□□ 0.93
VCP-202ENST00000417448 PSEN2P49810 448 aa20.86■□□□□ 0.93
VCP-202ENST00000417448 ANTXR2P58335 489 aa20.86■□□□□ 0.93
VCP-202ENST00000417448 DLX2Q07687 328 aaPredicted RBP20.86■□□□□ 0.93
VCP-202ENST00000417448 TRDNQ13061 729 aa20.86■□□□□ 0.93
VCP-202ENST00000417448 SMAD2Q15796 467 aaKnown RBP20.86■□□□□ 0.93
VCP-202ENST00000417448 SEPT14Q6ZU15 432 aa20.86■□□□□ 0.93
VCP-202ENST00000417448 RPAINQ86UA6 219 aa20.86■□□□□ 0.93
VCP-202ENST00000417448 SAMD11Q96NU1 681 aa20.86■□□□□ 0.93
VCP-202ENST00000417448 ZSCAN10Q96SZ4 725 aaPredicted RBP20.86■□□□□ 0.93
VCP-202ENST00000417448 ALG1Q9BT22 464 aa20.86■□□□□ 0.93
VCP-202ENST00000417448 CNNM2Q9H8M5 875 aa20.86■□□□□ 0.93
VCP-202ENST00000417448 ZFHX2Q9C0A1 2572 aaPredicted RBP20.85■□□□□ 0.93
VCP-202ENST00000417448 HAS3O00219 553 aa20.85■□□□□ 0.93
VCP-202ENST00000417448 ZNF286BP0CG31 522 aa20.85■□□□□ 0.93
VCP-202ENST00000417448 TOP1P11387 765 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms