RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 HSPA1LP34931 641 aa14.17□□□□□ -0.14
LRRTM1-205ENST00000417012 NAPAP54920 295 aa14.17□□□□□ -0.14
LRRTM1-205ENST00000417012 TSEN2Q8NCE0 465 aaKnown RBP14.17□□□□□ -0.14
LRRTM1-205ENST00000417012 ANKS1AQ92625 1134 aa14.17□□□□□ -0.14
LRRTM1-205ENST00000417012 EHD4Q9H223 541 aa14.17□□□□□ -0.14
LRRTM1-205ENST00000417012 RABEP2Q9H5N1 569 aa14.17□□□□□ -0.14
LRRTM1-205ENST00000417012 MYH10P35580 1976 aa14.17□□□□□ -0.14
LRRTM1-205ENST00000417012 ABCB11O95342 1321 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 IL1R1P14778 569 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 ADRA2BP18089 450 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 ATP2B4P23634 1241 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 TECP42680 631 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 LIG3P49916 1009 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 NAP1L1P55209 391 aaKnown RBP14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 NNTQ13423 1086 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 GLE1Q53GS7 698 aaKnown RBP14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 USP17L2Q6R6M4 530 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 CACNA2D4Q7Z3S7 1137 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 EYA3Q99504 573 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 EHD2Q9NZN4 543 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 ROBO3Q96MS0 1386 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 GPR75-ASB3A0A0A6YYF3 556 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 NCK2O43639 380 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 ONECUT3O60422 494 aaPredicted RBP14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 GTF2IP78347 998 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 PICALMQ13492 652 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 CFAP221Q4G0U5 840 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 SV2BQ7L1I2 683 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 NEK8Q86SG6 692 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 VAT1LQ9HCJ6 419 aa14.16□□□□□ -0.14
LRRTM1-205ENST00000417012 PJA2O43164 708 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 SKOR1P84550 965 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 TDRD12Q587J7 1177 aaKnown RBP14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 TTMPQ5BVD1 217 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 POTEDQ86YR6 584 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 GPIHBP1Q8IV16 184 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 IFT20Q8IY31 132 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 ANKRD13CQ8N6S4 541 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 ARL8AQ96BM9 186 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 LZTS2Q9BRK4 669 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 MXD3Q9BW11 206 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 ZMYND12Q9H0C1 365 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 RBM12Q9NTZ6 932 aaKnown RBP14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 DDX60LQ5H9U9 1706 aaKnown RBP14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 KLRF2D3W0D1 207 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 RHBDL3P58872 404 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 TTC19Q6DKK2 380 aaPredicted RBP14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 MMS22LQ6ZRQ5 1243 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 C15orf52Q6ZUT6 534 aaKnown RBP14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 TLR10Q9BXR5 811 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 C6orf50Q9HD87 102 aa14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 TRPC5Q9UL62 973 aaPredicted RBP14.15□□□□□ -0.14
LRRTM1-205ENST00000417012 POLRMTO00411 1230 aaKnown RBP14.15□□□□□ -0.15
LRRTM1-205ENST00000417012 GNA11P29992 359 aa14.15□□□□□ -0.15
LRRTM1-205ENST00000417012 APBA1Q02410 837 aa14.15□□□□□ -0.15
LRRTM1-205ENST00000417012 RASSF7Q02833 373 aa14.15□□□□□ -0.15
LRRTM1-205ENST00000417012 LRRC63Q05C16 580 aa14.15□□□□□ -0.15
LRRTM1-205ENST00000417012 GFPT1Q06210 699 aaPredicted RBP14.15□□□□□ -0.15
LRRTM1-205ENST00000417012 UNC13DQ70J99 1090 aa14.15□□□□□ -0.15
LRRTM1-205ENST00000417012 RNF10Q8N5U6 811 aaKnown RBP14.15□□□□□ -0.15
LRRTM1-205ENST00000417012 CEP95Q96GE4 821 aa14.15□□□□□ -0.15
LRRTM1-205ENST00000417012 CDK5RAP3Q96JB5 506 aa14.15□□□□□ -0.15
LRRTM1-205ENST00000417012 ZIM3Q96PE6 472 aa14.15□□□□□ -0.15
LRRTM1-205ENST00000417012 QTRT2Q9H974 415 aaKnown RBP14.15□□□□□ -0.15
LRRTM1-205ENST00000417012 RNF14Q9UBS8 474 aa14.15□□□□□ -0.15
LRRTM1-205ENST00000417012 SSU72P8A0A1W2PR75 194 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 NDUFAB1O14561 156 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 BUB1O43683 1085 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 PAK2Q13177 524 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 PDXDC1Q6P996 788 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 C16orf86Q6ZW13 317 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 GUF1Q8N442 669 aaKnown RBP14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 MTMR8Q96EF0 704 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 MMTAG2Q9BU76 263 aaKnown RBP14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 TANGO6Q9C0B7 1094 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 LUC7LQ9NQ29 371 aaKnown RBP14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 STK17AQ9UEE5 414 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 SALL4Q9UJQ4 1053 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 SNED1Q8TER0 1413 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 PVALEFA0A1B0GWK0 134 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 PALM3A6NDB9 673 aaPredicted RBP14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 BBOX1O75936 387 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 INPP5BP32019 993 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 SLC1A4P43007 532 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 EIF6P56537 245 aaKnown RBP14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 PDCLQ13371 301 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 CFAP58Q5T655 872 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 SOGA3Q5TF21 947 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 KLHDC7AQ5VTJ3 777 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 CLEC10AQ8IUN9 316 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 SUGP1Q8IWZ8 645 aaKnown RBP14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 BAP1Q92560 729 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 TSG101Q99816 390 aa14.14□□□□□ -0.15
LRRTM1-205ENST00000417012 SMCO2A6NFE2 343 aa14.13□□□□□ -0.15
LRRTM1-205ENST00000417012 B4GALNT4Q76KP1 1039 aa14.13□□□□□ -0.15
LRRTM1-205ENST00000417012 PROM2Q8N271 834 aa14.13□□□□□ -0.15
LRRTM1-205ENST00000417012 CCDC43Q96MW1 224 aaKnown RBP14.13□□□□□ -0.15
LRRTM1-205ENST00000417012 EDEM3Q9BZQ6 932 aa14.13□□□□□ -0.15
LRRTM1-205ENST00000417012 MYMKA6NI61 221 aa14.13□□□□□ -0.15
LRRTM1-205ENST00000417012 GUCY2CP25092 1073 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms