RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 MICU3Q86XE3 530 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 SLC17A8Q8NDX2 589 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 PPTC7Q8NI37 304 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 WNT8BQ93098 351 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 YBX2Q9Y2T7 364 aaKnown RBP17.46■□□□□ 0.39
UBXN4-203ENST00000416538 CNTNAP5Q8WYK1 1306 aa17.46■□□□□ 0.38
UBXN4-203ENST00000416538 KAT6AQ92794 2004 aa17.45■□□□□ 0.38
UBXN4-203ENST00000416538 CCDC69A6NI79 296 aa17.45■□□□□ 0.38
UBXN4-203ENST00000416538 GGPS1O95749 300 aa17.45■□□□□ 0.38
UBXN4-203ENST00000416538 SUPT20HL2P0C7V6 817 aa17.45■□□□□ 0.38
UBXN4-203ENST00000416538 KIF5BP33176 963 aa17.45■□□□□ 0.38
UBXN4-203ENST00000416538 PTPN11Q06124 597 aaPredicted RBP17.45■□□□□ 0.38
UBXN4-203ENST00000416538 CELF3Q5SZQ8 465 aaKnown RBP17.45■□□□□ 0.38
UBXN4-203ENST00000416538 TMTC3Q6ZXV5 915 aa17.45■□□□□ 0.38
UBXN4-203ENST00000416538 DEFB128Q7Z7B8 93 aa17.45■□□□□ 0.38
UBXN4-203ENST00000416538 SESTD1Q86VW0 696 aa17.45■□□□□ 0.38
UBXN4-203ENST00000416538 TIFAQ96CG3 184 aa17.45■□□□□ 0.38
UBXN4-203ENST00000416538 RRP36Q96EU6 259 aaKnown RBP17.45■□□□□ 0.38
UBXN4-203ENST00000416538 HDAC6Q9UBN7 1215 aa17.45■□□□□ 0.38
UBXN4-203ENST00000416538 PITPNM1O00562 1244 aa17.44■□□□□ 0.38
UBXN4-203ENST00000416538 FGBP02675 491 aa17.44■□□□□ 0.38
UBXN4-203ENST00000416538 CASTP20810 708 aaKnown RBP17.44■□□□□ 0.38
UBXN4-203ENST00000416538 SMARCA1P28370 1054 aa17.44■□□□□ 0.38
UBXN4-203ENST00000416538 PSEN2P49810 448 aa17.44■□□□□ 0.38
UBXN4-203ENST00000416538 GPNMBQ14956 572 aa17.44■□□□□ 0.38
UBXN4-203ENST00000416538 PTGISQ16647 500 aa17.44■□□□□ 0.38
UBXN4-203ENST00000416538 DGKDQ16760 1214 aa17.44■□□□□ 0.38
UBXN4-203ENST00000416538 APOA5Q6Q788 366 aa17.44■□□□□ 0.38
UBXN4-203ENST00000416538 DHX37Q8IY37 1157 aaKnown RBP17.44■□□□□ 0.38
UBXN4-203ENST00000416538 INPP4AQ96PE3 977 aaPredicted RBP17.44■□□□□ 0.38
UBXN4-203ENST00000416538 ALG1Q9BT22 464 aa17.44■□□□□ 0.38
UBXN4-203ENST00000416538 GTF2IRD1Q9UHL9 959 aa17.44■□□□□ 0.38
UBXN4-203ENST00000416538 BRPF3Q9ULD4 1205 aa17.44■□□□□ 0.38
UBXN4-203ENST00000416538 PIK3CDO00329 1044 aa17.43■□□□□ 0.38
UBXN4-203ENST00000416538 IQCF3P0C7M6 154 aa17.43■□□□□ 0.38
UBXN4-203ENST00000416538 RABGGTBP53611 331 aa17.43■□□□□ 0.38
UBXN4-203ENST00000416538 ZNF200P98182 395 aaPredicted RBP17.43■□□□□ 0.38
UBXN4-203ENST00000416538 EXOSC10Q01780 885 aaKnown RBP17.43■□□□□ 0.38
UBXN4-203ENST00000416538 FUT2Q10981 343 aa17.43■□□□□ 0.38
UBXN4-203ENST00000416538 TRAF1Q13077 416 aa17.43■□□□□ 0.38
UBXN4-203ENST00000416538 LAMC2Q13753 1193 aa17.43■□□□□ 0.38
UBXN4-203ENST00000416538 MFSD10Q14728 455 aa17.43■□□□□ 0.38
UBXN4-203ENST00000416538 KIAA0753Q2KHM9 967 aa17.43■□□□□ 0.38
UBXN4-203ENST00000416538 TYW1BQ6NUM6 668 aa17.43■□□□□ 0.38
UBXN4-203ENST00000416538 SPATA33Q96N06 139 aa17.43■□□□□ 0.38
UBXN4-203ENST00000416538 C16orf70Q9BSU1 422 aa17.43■□□□□ 0.38
UBXN4-203ENST00000416538 ZNF576Q9H609 170 aa17.43■□□□□ 0.38
UBXN4-203ENST00000416538 SLC12A7Q9Y666 1083 aa17.43■□□□□ 0.38
UBXN4-203ENST00000416538 CPA1P15085 419 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 MYOGP15173 224 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 ICAM3P32942 547 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 UBE2SQ16763 222 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 TCTN1Q2MV58 587 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 TRIM71Q2Q1W2 868 aaKnown RBP17.42■□□□□ 0.38
UBXN4-203ENST00000416538 TSGA10IPQ3SY00 556 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 TRAF7Q6Q0C0 670 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 TMTC2Q8N394 836 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 CCDC82Q8N4S0 544 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 USP38Q8NB14 1042 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 FANCBQ8NB91 859 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 MAFAQ8NHW3 353 aaPredicted RBP17.42■□□□□ 0.38
UBXN4-203ENST00000416538 NEK1Q96PY6 1258 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 LZTS2Q9BRK4 669 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 NKX2-4Q9H2Z4 354 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 RTEL1Q9NZ71 1219 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 SEC63Q9UGP8 760 aaKnown RBP17.42■□□□□ 0.38
UBXN4-203ENST00000416538 WDR81Q562E7 1941 aa17.42■□□□□ 0.38
UBXN4-203ENST00000416538 FOSL2P15408 326 aa17.41■□□□□ 0.38
UBXN4-203ENST00000416538 GNAQP50148 359 aa17.41■□□□□ 0.38
UBXN4-203ENST00000416538 RBL2Q08999 1139 aa17.41■□□□□ 0.38
UBXN4-203ENST00000416538 MKRN4PQ13434 485 aaPredicted RBP17.41■□□□□ 0.38
UBXN4-203ENST00000416538 TRIM50Q86XT4 487 aa17.41■□□□□ 0.38
UBXN4-203ENST00000416538 SMARCC2Q8TAQ2 1214 aa17.41■□□□□ 0.38
UBXN4-203ENST00000416538 FAM217BQ9NTX9 383 aaPredicted RBP17.41■□□□□ 0.38
UBXN4-203ENST00000416538 NOD1Q9Y239 953 aa17.41■□□□□ 0.38
UBXN4-203ENST00000416538 LOXHD1Q8IVV2 1947 aa17.41■□□□□ 0.38
UBXN4-203ENST00000416538 ZBBXA8MT70 800 aa17.4■□□□□ 0.38
UBXN4-203ENST00000416538 SPATA31C2B4DYI2 1134 aa17.4■□□□□ 0.38
UBXN4-203ENST00000416538 ARHGEF15O94989 841 aa17.4■□□□□ 0.38
UBXN4-203ENST00000416538 LGALS2P05162 132 aa17.4■□□□□ 0.38
UBXN4-203ENST00000416538 PFKMP08237 780 aa17.4■□□□□ 0.38
UBXN4-203ENST00000416538 CALM1P0DP23 149 aa17.4■□□□□ 0.38
UBXN4-203ENST00000416538 CALM2P0DP24 149 aa17.4■□□□□ 0.38
UBXN4-203ENST00000416538 CALM3P0DP25 149 aa17.4■□□□□ 0.38
UBXN4-203ENST00000416538 RNF20Q5VTR2 975 aa17.4■□□□□ 0.38
UBXN4-203ENST00000416538 PCNX4Q63HM2 1172 aa17.4■□□□□ 0.38
UBXN4-203ENST00000416538 WWC2Q6AWC2 1192 aa17.4■□□□□ 0.38
UBXN4-203ENST00000416538 KCNV1Q6PIU1 500 aa17.4■□□□□ 0.38
UBXN4-203ENST00000416538 RPUSD2Q8IZ73 545 aaKnown RBP17.4■□□□□ 0.38
UBXN4-203ENST00000416538 KCNB2Q92953 911 aa17.4■□□□□ 0.38
UBXN4-203ENST00000416538 NBNO60934 754 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 TGFB3P10600 412 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 CDC27P30260 824 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 HOXC8P31273 242 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 BFSP2Q13515 415 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 ADGRE1Q14246 886 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 MBTPS1Q14703 1052 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 LRRC8DQ7L1W4 858 aa17.39■□□□□ 0.37
UBXN4-203ENST00000416538 DHX32Q7L7V1 743 aaKnown RBP17.39■□□□□ 0.37
UBXN4-203ENST00000416538 C7orf31Q8N865 590 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms