RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 LRRC4CQ9HCJ2 640 aa7.85□□□□□ -1.15
EPHA4-204ENST00000415749 EVC2Q86UK5 1308 aa7.84□□□□□ -1.15
EPHA4-204ENST00000415749 FAM155AB1AL88 458 aaPredicted RBP7.84□□□□□ -1.15
EPHA4-204ENST00000415749 GRIK1P39086 918 aa7.84□□□□□ -1.15
EPHA4-204ENST00000415749 CDKN1CP49918 316 aaPredicted RBP7.84□□□□□ -1.15
EPHA4-204ENST00000415749 SSRP1Q08945 709 aaKnown RBP7.84□□□□□ -1.15
EPHA4-204ENST00000415749 TDRD10Q5VZ19 366 aaKnown RBP7.84□□□□□ -1.15
EPHA4-204ENST00000415749 KIAA1211LQ6NV74 962 aa7.84□□□□□ -1.15
EPHA4-204ENST00000415749 SMIM5Q71RC9 77 aa7.84□□□□□ -1.15
EPHA4-204ENST00000415749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.84□□□□□ -1.15
EPHA4-204ENST00000415749 VWCEQ96DN2 955 aa7.84□□□□□ -1.15
EPHA4-204ENST00000415749 LTV1Q96GA3 475 aaPredicted RBP7.84□□□□□ -1.15
EPHA4-204ENST00000415749 ZNF512BQ96KM6 892 aaPredicted RBP7.84□□□□□ -1.15
EPHA4-204ENST00000415749 ASCC2Q9H1I8 757 aaPredicted RBP7.84□□□□□ -1.15
EPHA4-204ENST00000415749 TCEAL9Q9UHQ7 104 aa7.84□□□□□ -1.15
EPHA4-204ENST00000415749 PCDHB10Q9UN67 800 aa7.84□□□□□ -1.15
EPHA4-204ENST00000415749 TUBGCP6Q96RT7 1819 aa7.84□□□□□ -1.15
EPHA4-204ENST00000415749 PIK3C2AO00443 1686 aa7.83□□□□□ -1.16
EPHA4-204ENST00000415749 PRC1O43663 620 aa7.83□□□□□ -1.16
EPHA4-204ENST00000415749 TP53P04637 393 aaPredicted RBP7.83□□□□□ -1.16
EPHA4-204ENST00000415749 ZNF143P52747 638 aaPredicted RBP7.83□□□□□ -1.16
EPHA4-204ENST00000415749 TGFB2P61812 414 aa7.83□□□□□ -1.16
EPHA4-204ENST00000415749 PRSS36Q5K4E3 855 aa7.83□□□□□ -1.16
EPHA4-204ENST00000415749 TMED8Q6PL24 325 aaPredicted RBP7.83□□□□□ -1.16
EPHA4-204ENST00000415749 SYNPOQ8N3V7 929 aa7.83□□□□□ -1.16
EPHA4-204ENST00000415749 IP6K1Q92551 441 aa7.83□□□□□ -1.16
EPHA4-204ENST00000415749 ZMYM5Q9UJ78 669 aa7.83□□□□□ -1.16
EPHA4-204ENST00000415749 ATP8A1Q9Y2Q0 1164 aa7.83□□□□□ -1.16
EPHA4-204ENST00000415749 PCDHB12Q9Y5F1 795 aa7.83□□□□□ -1.16
EPHA4-204ENST00000415749 NSD2O96028 1365 aa7.83□□□□□ -1.16
EPHA4-204ENST00000415749 KTN1Q86UP2 1357 aaKnown RBP7.83□□□□□ -1.16
EPHA4-204ENST00000415749 A0A0G2JLW4 131 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 B2RBV5 119 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 C9IYK1 514 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 CEACAM5P06731 702 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 FOSL1P15407 271 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 OXCT1P55809 520 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 AUHQ13825 339 aaKnown RBP7.82□□□□□ -1.16
EPHA4-204ENST00000415749 NBPF9Q3BBW0 867 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 ANKRD39Q53RE8 183 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 BRDTQ58F21 947 aaPredicted RBP7.82□□□□□ -1.16
EPHA4-204ENST00000415749 HEATR6Q6AI08 1181 aaKnown RBP7.82□□□□□ -1.16
EPHA4-204ENST00000415749 EEPD1Q7L9B9 569 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 PPFIBP1Q86W92 1011 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 C7orf61Q8IZ16 206 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 KLHL6Q8WZ60 621 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 WDR90Q96KV7 1748 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 FAM126AQ9BYI3 521 aaPredicted RBP7.82□□□□□ -1.16
EPHA4-204ENST00000415749 GBP3Q9H0R5 595 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 FBXL21Q9UKT6 434 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 PLAAQ9Y263 795 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 CAPN6Q9Y6Q1 641 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 NFAT5O94916 1531 aa7.82□□□□□ -1.16
EPHA4-204ENST00000415749 PRR19A6NJB7 356 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 ITIH2P19823 946 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 EXOSC10Q01780 885 aaKnown RBP7.81□□□□□ -1.16
EPHA4-204ENST00000415749 AXDND1Q5T1B0 1012 aaPredicted RBP7.81□□□□□ -1.16
EPHA4-204ENST00000415749 AMIGO3Q86WK7 504 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 NME9Q86XW9 330 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 SMC5Q8IY18 1101 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 RAVER1Q8IY67 606 aaKnown RBP7.81□□□□□ -1.16
EPHA4-204ENST00000415749 FAM181AQ8N9Y4 354 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 DTWD2Q8NBA8 298 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 SMC1BQ8NDV3 1235 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 NETO1Q8TDF5 533 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 HAUS7Q99871 368 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 EPN3Q9H201 632 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 TRIT1Q9H3H1 467 aaKnown RBP7.81□□□□□ -1.16
EPHA4-204ENST00000415749 FAM86C1Q9NVL1 165 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 GEMIN8Q9NWZ8 242 aaKnown RBP7.81□□□□□ -1.16
EPHA4-204ENST00000415749 PRR13Q9NZ81 148 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 LY75O60449 1722 aa7.81□□□□□ -1.16
EPHA4-204ENST00000415749 CNTNAP4Q9C0A0 1308 aa7.8□□□□□ -1.16
EPHA4-204ENST00000415749 TMEM265A0A087WTH1 108 aa7.8□□□□□ -1.16
EPHA4-204ENST00000415749 ANKRD34BA5PLL1 514 aa7.8□□□□□ -1.16
EPHA4-204ENST00000415749 MMP10P09238 476 aa7.8□□□□□ -1.16
EPHA4-204ENST00000415749 MYCLP1P12525 358 aaPredicted RBP7.8□□□□□ -1.16
EPHA4-204ENST00000415749 CLCN7P51798 805 aa7.8□□□□□ -1.16
EPHA4-204ENST00000415749 IFI16Q16666 785 aaKnown RBP7.8□□□□□ -1.16
EPHA4-204ENST00000415749 INTS5Q6P9B9 1019 aaKnown RBP7.8□□□□□ -1.16
EPHA4-204ENST00000415749 CHAC2Q8WUX2 184 aa7.8□□□□□ -1.16
EPHA4-204ENST00000415749 Q96M66 194 aa7.8□□□□□ -1.16
EPHA4-204ENST00000415749 APBA2Q99767 749 aa7.8□□□□□ -1.16
EPHA4-204ENST00000415749 PRR33A8MZF0 331 aa7.79□□□□□ -1.16
EPHA4-204ENST00000415749 LRRN2O75325 713 aa7.79□□□□□ -1.16
EPHA4-204ENST00000415749 ITGA4P13612 1032 aa7.79□□□□□ -1.16
EPHA4-204ENST00000415749 DPEP1P16444 411 aa7.79□□□□□ -1.16
EPHA4-204ENST00000415749 POU3F3P20264 500 aaPredicted RBP7.79□□□□□ -1.16
EPHA4-204ENST00000415749 TNK2Q07912 1038 aa7.79□□□□□ -1.16
EPHA4-204ENST00000415749 CLEC16AQ2KHT3 1053 aa7.79□□□□□ -1.16
EPHA4-204ENST00000415749 TM4SF20Q53R12 229 aa7.79□□□□□ -1.16
EPHA4-204ENST00000415749 DCAF15Q66K64 600 aa7.79□□□□□ -1.16
EPHA4-204ENST00000415749 DDX42Q86XP3 938 aaKnown RBP eCLIP7.79□□□□□ -1.16
EPHA4-204ENST00000415749 WDR75Q8IWA0 830 aaKnown RBP7.79□□□□□ -1.16
EPHA4-204ENST00000415749 ZSWIM2Q8NEG5 633 aa7.79□□□□□ -1.16
EPHA4-204ENST00000415749 ST13P5Q8NFI4 369 aaPredicted RBP7.79□□□□□ -1.16
EPHA4-204ENST00000415749 ENOX1Q8TC92 643 aaKnown RBP7.79□□□□□ -1.16
EPHA4-204ENST00000415749 TSR2Q969E8 191 aaKnown RBP7.79□□□□□ -1.16
EPHA4-204ENST00000415749 C8orf48Q96LL4 319 aa7.79□□□□□ -1.16
EPHA4-204ENST00000415749 GPATCH2Q9NW75 528 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms