RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 ZNF286BP0CG31 522 aa28.77■■■□□ 2.2
HLA-C-204ENST00000415537 UBA1P22314 1058 aaKnown RBP28.77■■■□□ 2.2
HLA-C-204ENST00000415537 PSEN2P49810 448 aa28.77■■■□□ 2.2
HLA-C-204ENST00000415537 SP2Q02086 613 aa28.77■■■□□ 2.2
HLA-C-204ENST00000415537 TMTC3Q6ZXV5 915 aa28.77■■■□□ 2.2
HLA-C-204ENST00000415537 DEFB128Q7Z7B8 93 aa28.77■■■□□ 2.2
HLA-C-204ENST00000415537 RASEFQ8IZ41 740 aa28.77■■■□□ 2.2
HLA-C-204ENST00000415537 PSTPIP2Q9H939 334 aa28.77■■■□□ 2.2
HLA-C-204ENST00000415537 RBM28Q9NW13 759 aaKnown RBP28.77■■■□□ 2.2
HLA-C-204ENST00000415537 RTEL1Q9NZ71 1219 aa28.77■■■□□ 2.2
HLA-C-204ENST00000415537 CXXC1Q9P0U4 656 aaPredicted RBP28.77■■■□□ 2.2
HLA-C-204ENST00000415537 MEIS2O14770 477 aa28.76■■■□□ 2.19
HLA-C-204ENST00000415537 HMGB1P09429 215 aaKnown RBP28.76■■■□□ 2.19
HLA-C-204ENST00000415537 RFC2P35250 354 aa28.76■■■□□ 2.19
HLA-C-204ENST00000415537 MRPS9P82933 396 aaKnown RBP28.76■■■□□ 2.19
HLA-C-204ENST00000415537 EXOSC10Q01780 885 aaKnown RBP28.76■■■□□ 2.19
HLA-C-204ENST00000415537 MFSD10Q14728 455 aa28.76■■■□□ 2.19
HLA-C-204ENST00000415537 ADCK5Q3MIX3 580 aa28.76■■■□□ 2.19
HLA-C-204ENST00000415537 HSDL1Q3SXM5 330 aa28.76■■■□□ 2.19
HLA-C-204ENST00000415537 GDF6Q6KF10 455 aaPredicted RBP28.76■■■□□ 2.19
HLA-C-204ENST00000415537 APOA5Q6Q788 366 aa28.76■■■□□ 2.19
HLA-C-204ENST00000415537 GPKOWQ92917 476 aaPredicted RBP eCLIP28.76■■■□□ 2.19
HLA-C-204ENST00000415537 TCEANC2Q96MN5 208 aa28.76■■■□□ 2.19
HLA-C-204ENST00000415537 hCG_1642624A0A1W2PR95 340 aa28.75■■■□□ 2.19
HLA-C-204ENST00000415537 ZBBXA8MT70 800 aa28.75■■■□□ 2.19
HLA-C-204ENST00000415537 F2P00734 622 aa28.75■■■□□ 2.19
HLA-C-204ENST00000415537 KIAA0753Q2KHM9 967 aa28.75■■■□□ 2.19
HLA-C-204ENST00000415537 CAGE1Q8TC20 777 aa28.75■■■□□ 2.19
HLA-C-204ENST00000415537 INPP4AQ96PE3 977 aaPredicted RBP28.75■■■□□ 2.19
HLA-C-204ENST00000415537 PBX4Q9BYU1 374 aa28.75■■■□□ 2.19
HLA-C-204ENST00000415537 HDAC6Q9UBN7 1215 aa28.75■■■□□ 2.19
HLA-C-204ENST00000415537 GTF2IRD1Q9UHL9 959 aa28.75■■■□□ 2.19
HLA-C-204ENST00000415537 MSRAQ9UJ68 235 aa28.75■■■□□ 2.19
HLA-C-204ENST00000415537 TANC1Q9C0D5 1861 aa28.74■■■□□ 2.19
HLA-C-204ENST00000415537 ZBTB43O43298 467 aa28.74■■■□□ 2.19
HLA-C-204ENST00000415537 NEFLP07196 543 aa28.74■■■□□ 2.19
HLA-C-204ENST00000415537 IQCF3P0C7M6 154 aa28.74■■■□□ 2.19
HLA-C-204ENST00000415537 ACTN1P12814 892 aa28.74■■■□□ 2.19
HLA-C-204ENST00000415537 FGD1P98174 961 aa28.74■■■□□ 2.19
HLA-C-204ENST00000415537 NEDD9Q14511 834 aa28.74■■■□□ 2.19
HLA-C-204ENST00000415537 PCNX4Q63HM2 1172 aa28.74■■■□□ 2.19
HLA-C-204ENST00000415537 XRRA1Q6P2D8 792 aa28.74■■■□□ 2.19
HLA-C-204ENST00000415537 MYLIPQ8WY64 445 aa28.74■■■□□ 2.19
HLA-C-204ENST00000415537 ZNF576Q9H609 170 aa28.74■■■□□ 2.19
HLA-C-204ENST00000415537 SLC4A7Q9Y6M7 1214 aa28.74■■■□□ 2.19
HLA-C-204ENST00000415537 NOP56O00567 594 aaKnown RBP28.73■■■□□ 2.19
HLA-C-204ENST00000415537 FIBPO43427 364 aa28.73■■■□□ 2.19
HLA-C-204ENST00000415537 HOXD8P13378 290 aaPredicted RBP28.73■■■□□ 2.19
HLA-C-204ENST00000415537 ICAM3P32942 547 aa28.73■■■□□ 2.19
HLA-C-204ENST00000415537 PBX2P40425 430 aa28.73■■■□□ 2.19
HLA-C-204ENST00000415537 RAB30Q15771 203 aa28.73■■■□□ 2.19
HLA-C-204ENST00000415537 HEATR3Q7Z4Q2 680 aa28.73■■■□□ 2.19
HLA-C-204ENST00000415537 GBF1Q92538 1859 aa28.72■■■□□ 2.19
HLA-C-204ENST00000415537 DOCK5Q9H7D0 1870 aa28.72■■■□□ 2.19
HLA-C-204ENST00000415537 SPATA31C2B4DYI2 1134 aa28.72■■■□□ 2.19
HLA-C-204ENST00000415537 HAS3O00219 553 aa28.72■■■□□ 2.19
HLA-C-204ENST00000415537 RTN1Q16799 776 aa28.72■■■□□ 2.19
HLA-C-204ENST00000415537 NLRX1Q86UT6 975 aa28.72■■■□□ 2.19
HLA-C-204ENST00000415537 FTOQ9C0B1 505 aaKnown RBP eCLIP28.72■■■□□ 2.19
HLA-C-204ENST00000415537 FOSL2P15408 326 aa28.71■■■□□ 2.19
HLA-C-204ENST00000415537 AFAP1L1Q8TED9 768 aa28.71■■■□□ 2.19
HLA-C-204ENST00000415537 BRPF3Q9ULD4 1205 aa28.71■■■□□ 2.19
HLA-C-204ENST00000415537 NAP1L2Q9ULW6 460 aaPredicted RBP28.71■■■□□ 2.19
HLA-C-204ENST00000415537 KLF18A0A0U1RQI7 1052 aa28.7■■■□□ 2.18
HLA-C-204ENST00000415537 SPDYE3A6NKU9 549 aa28.7■■■□□ 2.18
HLA-C-204ENST00000415537 METTL7BQ6UX53 244 aa28.7■■■□□ 2.18
HLA-C-204ENST00000415537 CYFIP1Q7L576 1253 aa28.7■■■□□ 2.18
HLA-C-204ENST00000415537 VWCEQ96DN2 955 aa28.7■■■□□ 2.18
HLA-C-204ENST00000415537 GOLGA8AA7E2F4 631 aa28.69■■■□□ 2.18
HLA-C-204ENST00000415537 GOLGA8BA8MQT2 603 aa28.69■■■□□ 2.18
HLA-C-204ENST00000415537 GRIN2CQ14957 1233 aa28.69■■■□□ 2.18
HLA-C-204ENST00000415537 CTAGE1Q96RT6 745 aa28.69■■■□□ 2.18
HLA-C-204ENST00000415537 C16orf70Q9BSU1 422 aa28.69■■■□□ 2.18
HLA-C-204ENST00000415537 CNTNAP5Q8WYK1 1306 aa28.69■■■□□ 2.18
HLA-C-204ENST00000415537 H3BRB1 525 aa28.68■■■□□ 2.18
HLA-C-204ENST00000415537 REC8O95072 547 aa28.68■■■□□ 2.18
HLA-C-204ENST00000415537 SEMA3FQ13275 785 aa28.68■■■□□ 2.18
HLA-C-204ENST00000415537 PTK7Q13308 1070 aa28.68■■■□□ 2.18
HLA-C-204ENST00000415537 UBE2SQ16763 222 aa28.68■■■□□ 2.18
HLA-C-204ENST00000415537 MAFAQ8NHW3 353 aaPredicted RBP28.68■■■□□ 2.18
HLA-C-204ENST00000415537 SENP7Q9BQF6 1050 aa28.68■■■□□ 2.18
HLA-C-204ENST00000415537 USP26Q9BXU7 913 aa28.68■■■□□ 2.18
HLA-C-204ENST00000415537 TUT1Q9H6E5 874 aaKnown RBP28.68■■■□□ 2.18
HLA-C-204ENST00000415537 BCAS3Q9H6U6 928 aa28.68■■■□□ 2.18
HLA-C-204ENST00000415537 EHMT1Q9H9B1 1298 aa28.68■■■□□ 2.18
HLA-C-204ENST00000415537 PARNO95453 639 aaKnown RBP28.67■■■□□ 2.18
HLA-C-204ENST00000415537 LGALS2P05162 132 aa28.67■■■□□ 2.18
HLA-C-204ENST00000415537 SELPP16109 830 aa28.67■■■□□ 2.18
HLA-C-204ENST00000415537 ATP2A2P16615 1042 aaKnown RBP28.67■■■□□ 2.18
HLA-C-204ENST00000415537 HSPA4P34932 840 aa28.67■■■□□ 2.18
HLA-C-204ENST00000415537 LRRC8DQ7L1W4 858 aa28.67■■■□□ 2.18
HLA-C-204ENST00000415537 GIMAP8Q8ND71 665 aaPredicted RBP28.67■■■□□ 2.18
HLA-C-204ENST00000415537 DHX38Q92620 1227 aaKnown RBP28.67■■■□□ 2.18
HLA-C-204ENST00000415537 KCNB2Q92953 911 aa28.67■■■□□ 2.18
HLA-C-204ENST00000415537 CDHR1Q96JP9 859 aa28.67■■■□□ 2.18
HLA-C-204ENST00000415537 JAKMIP1Q96N16 626 aaKnown RBP28.67■■■□□ 2.18
HLA-C-204ENST00000415537 SLC28A3Q9HAS3 691 aa28.67■■■□□ 2.18
HLA-C-204ENST00000415537 PCDHA6Q9UN73 950 aa28.67■■■□□ 2.18
HLA-C-204ENST00000415537 PCDHA8Q9Y5H6 950 aa28.67■■■□□ 2.18
HLA-C-204ENST00000415537 V9GY48 417 aaPredicted RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms