RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 NAP1L1P55209 391 aaKnown RBP19.9■□□□□ 0.78
SCARB1-203ENST00000415380 TMEM119Q4V9L6 283 aa19.9■□□□□ 0.78
SCARB1-203ENST00000415380 KRT79Q5XKE5 535 aa19.9■□□□□ 0.78
SCARB1-203ENST00000415380 TEX11Q8IYF3 940 aa19.9■□□□□ 0.78
SCARB1-203ENST00000415380 RAB34Q9BZG1 259 aa19.9■□□□□ 0.78
SCARB1-203ENST00000415380 ZNF831Q5JPB2 1677 aa19.9■□□□□ 0.78
SCARB1-203ENST00000415380 RBAK-RBAKDNI3L0D1 243 aa19.89■□□□□ 0.78
SCARB1-203ENST00000415380 ADCY7P51828 1080 aa19.89■□□□□ 0.78
SCARB1-203ENST00000415380 ALS2CLQ60I27 953 aa19.89■□□□□ 0.78
SCARB1-203ENST00000415380 TLR2O60603 784 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 ZPR1O75312 459 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 EPB41P11171 864 aaKnown RBP19.89■□□□□ 0.77
SCARB1-203ENST00000415380 NFIXQ14938 502 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 ECM1Q16610 540 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 ZCWPW2Q504Y3 356 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 TTMPQ5BVD1 217 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 GBP6Q6ZN66 633 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 ZNF804AQ7Z570 1209 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 PACS2Q86VP3 889 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 MYOCDQ8IZQ8 938 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 PROM2Q8N271 834 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 ARL8AQ96BM9 186 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 CEP72Q9P209 647 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 COL4A3BPQ9Y5P4 624 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 GRIN2DO15399 1336 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 HSF2BPO75031 334 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 NOL4O94818 638 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 NOP2P46087 812 aaKnown RBP19.89■□□□□ 0.77
SCARB1-203ENST00000415380 CCT5P48643 541 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 SLC9C1Q4G0N8 1177 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 CFAP221Q4G0U5 840 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 GLE1Q53GS7 698 aaKnown RBP19.89■□□□□ 0.77
SCARB1-203ENST00000415380 PPM1EQ8WY54 764 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 LRRC27Q9C0I9 530 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 TSKSQ9UJT2 592 aa19.89■□□□□ 0.77
SCARB1-203ENST00000415380 hCG_1984214I3L0E3 225 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 PDHBP11177 359 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 GNGT1P63211 74 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 TTC31Q49AM3 519 aaPredicted RBP19.88■□□□□ 0.77
SCARB1-203ENST00000415380 FOXR2Q6PJQ5 311 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 ZNF713Q8N859 430 aaPredicted RBP19.88■□□□□ 0.77
SCARB1-203ENST00000415380 CDK5RAP2Q96SN8 1893 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 EIF3HO15372 352 aaKnown RBP eCLIP19.88■□□□□ 0.771e-5■□□□□ 9.1
SCARB1-203ENST00000415380 RPS6KA4O75676 772 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 NOVP48745 357 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 FKBP3Q00688 224 aaKnown RBP19.88■□□□□ 0.77
SCARB1-203ENST00000415380 COASYQ13057 564 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 CCDC40Q4G0X9 1142 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 FAM83BQ5T0W9 1011 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 SFMBT2Q5VUG0 894 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 EFCAB13Q8IY85 973 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 DNAJC19Q96DA6 116 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 RUFY1Q96T51 708 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 EFCC1Q9HA90 598 aa19.88■□□□□ 0.77
SCARB1-203ENST00000415380 TNRC6CQ9HCJ0 1690 aaKnown RBP19.87■□□□□ 0.77
SCARB1-203ENST00000415380 GPR75-ASB3A0A0A6YYF3 556 aa19.87■□□□□ 0.77
SCARB1-203ENST00000415380 TRAF5O00463 557 aa19.87■□□□□ 0.77
SCARB1-203ENST00000415380 SERPING1P05155 500 aa19.87■□□□□ 0.77
SCARB1-203ENST00000415380 GLI1P08151 1106 aa19.87■□□□□ 0.77
SCARB1-203ENST00000415380 HOXA7P31268 230 aaPredicted RBP19.87■□□□□ 0.77
SCARB1-203ENST00000415380 ARHGAP27Q6ZUM4 889 aa19.87■□□□□ 0.77
SCARB1-203ENST00000415380 LSM14BQ9BX40 385 aaKnown RBP19.87■□□□□ 0.77
SCARB1-203ENST00000415380 PALMO75781 387 aa19.87■□□□□ 0.77
SCARB1-203ENST00000415380 NNTQ13423 1086 aa19.87■□□□□ 0.77
SCARB1-203ENST00000415380 TTC19Q6DKK2 380 aaPredicted RBP19.87■□□□□ 0.77
SCARB1-203ENST00000415380 SYN2Q92777 582 aaPredicted RBP19.87■□□□□ 0.77
SCARB1-203ENST00000415380 ZIM3Q96PE6 472 aa19.87■□□□□ 0.77
SCARB1-203ENST00000415380 NUCKS1Q9H1E3 243 aaKnown RBP19.87■□□□□ 0.77
SCARB1-203ENST00000415380 RABEP2Q9H5N1 569 aa19.87■□□□□ 0.77
SCARB1-203ENST00000415380 RNF14Q9UBS8 474 aa19.87■□□□□ 0.77
SCARB1-203ENST00000415380 TNNI2P48788 182 aa19.86■□□□□ 0.77
SCARB1-203ENST00000415380 GRAPQ13588 217 aa19.86■□□□□ 0.77
SCARB1-203ENST00000415380 BARGINQ6ZT62 677 aa19.86■□□□□ 0.77
SCARB1-203ENST00000415380 CERS3Q8IU89 383 aa19.86■□□□□ 0.77
SCARB1-203ENST00000415380 IFT20Q8IY31 132 aa19.86■□□□□ 0.77
SCARB1-203ENST00000415380 GRAPLQ8TC17 118 aaPredicted RBP19.86■□□□□ 0.77
SCARB1-203ENST00000415380 BCAS4Q8TDM0 211 aa19.86■□□□□ 0.77
SCARB1-203ENST00000415380 GDF3Q9NR23 364 aa19.86■□□□□ 0.77
SCARB1-203ENST00000415380 GNPATO15228 680 aa19.86■□□□□ 0.77
SCARB1-203ENST00000415380 CARSP49589 748 aaKnown RBP19.86■□□□□ 0.77
SCARB1-203ENST00000415380 DNA2P51530 1060 aa19.86■□□□□ 0.77
SCARB1-203ENST00000415380 POLR2FP61218 127 aaKnown RBP19.86■□□□□ 0.77
SCARB1-203ENST00000415380 APBA1Q02410 837 aa19.86■□□□□ 0.77
SCARB1-203ENST00000415380 GJA10Q969M2 543 aa19.86■□□□□ 0.77
SCARB1-203ENST00000415380 FGFBP2Q9BYJ0 223 aa19.86■□□□□ 0.77
SCARB1-203ENST00000415380 FTCDO95954 541 aa19.85■□□□□ 0.77
SCARB1-203ENST00000415380 NAB2Q15742 525 aa19.85■□□□□ 0.77
SCARB1-203ENST00000415380 PTF1AQ7RTS3 328 aa19.85■□□□□ 0.77
SCARB1-203ENST00000415380 PANK4Q9NVE7 773 aa19.85■□□□□ 0.77
SCARB1-203ENST00000415380 NFU1Q9UMS0 254 aa19.85■□□□□ 0.77
SCARB1-203ENST00000415380 ATP6V0A2Q9Y487 856 aa19.85■□□□□ 0.77
SCARB1-203ENST00000415380 ZSCAN5CA6NGD5 496 aaPredicted RBP19.85■□□□□ 0.77
SCARB1-203ENST00000415380 HEXIM1O94992 359 aaKnown RBP19.85■□□□□ 0.77
SCARB1-203ENST00000415380 FAM153BP0C7A2 387 aa19.85■□□□□ 0.77
SCARB1-203ENST00000415380 KLRC1P26715 233 aa19.85■□□□□ 0.77
SCARB1-203ENST00000415380 RHBDL3P58872 404 aa19.85■□□□□ 0.77
SCARB1-203ENST00000415380 SKOR1P84550 965 aa19.85■□□□□ 0.77
SCARB1-203ENST00000415380 UBE2SQ16763 222 aa19.85■□□□□ 0.77
SCARB1-203ENST00000415380 FAM153CQ494X1 144 aa19.85■□□□□ 0.77
SCARB1-203ENST00000415380 FAM26FQ5R3K3 315 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms