RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.56□□□□□ -0.24
ATG4B-207ENST00000415107 FAM86B1E9PN63 330 aa13.56□□□□□ -0.24
ATG4B-207ENST00000415107 ARIH2O95376 493 aa13.56□□□□□ -0.24
ATG4B-207ENST00000415107 FAM86B2P0C5J1 330 aa13.56□□□□□ -0.24
ATG4B-207ENST00000415107 HOXD8P13378 290 aaPredicted RBP13.56□□□□□ -0.24
ATG4B-207ENST00000415107 UBA1P22314 1058 aaKnown RBP13.56□□□□□ -0.24
ATG4B-207ENST00000415107 MTMR1Q13613 665 aa13.56□□□□□ -0.24
ATG4B-207ENST00000415107 NEDD9Q14511 834 aa13.56□□□□□ -0.24
ATG4B-207ENST00000415107 LARP1BQ659C4 914 aaKnown RBP13.56□□□□□ -0.24
ATG4B-207ENST00000415107 SEPT14Q6ZU15 432 aa13.56□□□□□ -0.24
ATG4B-207ENST00000415107 EEPD1Q7L9B9 569 aa13.56□□□□□ -0.24
ATG4B-207ENST00000415107 TLK2Q86UE8 772 aa13.56□□□□□ -0.24
ATG4B-207ENST00000415107 NOSTRINQ8IVI9 506 aa13.56□□□□□ -0.24
ATG4B-207ENST00000415107 DEFB118Q96PH6 123 aa13.56□□□□□ -0.24
ATG4B-207ENST00000415107 KCNH7Q9NS40 1196 aa13.56□□□□□ -0.24
ATG4B-207ENST00000415107 NFASCO94856 1347 aa13.56□□□□□ -0.24
ATG4B-207ENST00000415107 SYNRGQ9UMZ2 1314 aa13.56□□□□□ -0.24
ATG4B-207ENST00000415107 A6NJR5 290 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 DNM1LO00429 736 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 CTAGE5O15320 804 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 GH1P01241 217 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 TXNP10599 105 aaKnown RBP13.55□□□□□ -0.24
ATG4B-207ENST00000415107 KCNA2P16389 499 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 SYT1P21579 422 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 CNGA1P29973 690 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 ARHGAP1Q07960 439 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 LAMC2Q13753 1193 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 INF2Q27J81 1249 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 EARS2Q5JPH6 523 aaKnown RBP13.55□□□□□ -0.24
ATG4B-207ENST00000415107 CCSAPQ6IQ19 270 aaPredicted RBP13.55□□□□□ -0.24
ATG4B-207ENST00000415107 METTL7BQ6UX53 244 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 PIK3AP1Q6ZUJ8 805 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 UBE2Q1Q7Z7E8 422 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 ARRDC4Q8NCT1 418 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 TSEN34Q9BSV6 310 aaKnown RBP13.55□□□□□ -0.24
ATG4B-207ENST00000415107 SPC25Q9HBM1 224 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 XPNPEP3Q9NQH7 507 aa13.55□□□□□ -0.24
ATG4B-207ENST00000415107 POTEFA5A3E0 1075 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 MOXD2PA6NHM9 499 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 KIF28PB7ZC32 967 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 H3BQV1 296 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 TBX3O15119 743 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
ATG4B-207ENST00000415107 GUCY1B3Q02153 619 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 CELF3Q5SZQ8 465 aaKnown RBP13.54□□□□□ -0.24
ATG4B-207ENST00000415107 IFFO2Q5TF58 517 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 MYSM1Q5VVJ2 828 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 BRAPQ7Z569 592 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 RNF180Q86T96 592 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 PPTC7Q8NI37 304 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 CYP2W1Q8TAV3 490 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 AGO4Q9HCK5 861 aaKnown RBP13.54□□□□□ -0.24
ATG4B-207ENST00000415107 KCNMB3Q9NPA1 279 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 RTEL1Q9NZ71 1219 aa13.54□□□□□ -0.24
ATG4B-207ENST00000415107 FARP2O94887 1054 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-207ENST00000415107 HSP90AA1P07900 732 aaKnown RBP13.53□□□□□ -0.24
ATG4B-207ENST00000415107 COL6A1P12109 1028 aa13.53□□□□□ -0.24
ATG4B-207ENST00000415107 ZNF76P36508 570 aa13.53□□□□□ -0.24
ATG4B-207ENST00000415107 CPT1AP50416 773 aa13.53□□□□□ -0.24
ATG4B-207ENST00000415107 SP2Q02086 613 aa13.53□□□□□ -0.24
ATG4B-207ENST00000415107 LRRC41Q15345 812 aa13.53□□□□□ -0.24
ATG4B-207ENST00000415107 LY6KQ17RY6 165 aa13.53□□□□□ -0.24
ATG4B-207ENST00000415107 PLA2G4DQ86XP0 818 aa13.53□□□□□ -0.24
ATG4B-207ENST00000415107 PCSK9Q8NBP7 692 aaKnown RBP13.53□□□□□ -0.24
ATG4B-207ENST00000415107 ETNPPLQ8TBG4 499 aa13.53□□□□□ -0.24
ATG4B-207ENST00000415107 TBC1D22BQ9NU19 505 aa13.53□□□□□ -0.24
ATG4B-207ENST00000415107 DHX15O43143 795 aaKnown RBP13.52□□□□□ -0.25
ATG4B-207ENST00000415107 STX6O43752 255 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 KPNA6O60684 536 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 GGPS1O95749 300 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 FOSBP53539 338 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 FSCN1Q16658 493 aaKnown RBP13.52□□□□□ -0.25
ATG4B-207ENST00000415107 LETM2Q2VYF4 491 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 BRDTQ58F21 947 aaPredicted RBP13.52□□□□□ -0.25
ATG4B-207ENST00000415107 RILPL1Q5EBL4 403 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 TMEM63BQ5T3F8 832 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 OR6J1Q8NGC5 347 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 SLC5A5Q92911 643 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 LENG1Q96BZ8 264 aaPredicted RBP13.52□□□□□ -0.25
ATG4B-207ENST00000415107 FAM20AQ96MK3 541 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 RIT2Q99578 217 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 SEZ6LQ9BYH1 1024 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 AP5M1Q9H0R1 490 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 DDX25Q9UHL0 483 aaKnown RBP13.52□□□□□ -0.25
ATG4B-207ENST00000415107 NOL7Q9UMY1 257 aaKnown RBP13.52□□□□□ -0.25
ATG4B-207ENST00000415107 PHF24Q9UPV7 400 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 MTMR6Q9Y217 621 aa13.52□□□□□ -0.25
ATG4B-207ENST00000415107 FAM205CA6NFA0 338 aa13.51□□□□□ -0.25
ATG4B-207ENST00000415107 IPO5O00410 1097 aaKnown RBP13.51□□□□□ -0.25
ATG4B-207ENST00000415107 DYNC1LI2O43237 492 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-207ENST00000415107 ZEB2O60315 1214 aa13.51□□□□□ -0.25
ATG4B-207ENST00000415107 ATP9AO75110 1047 aa13.51□□□□□ -0.25
ATG4B-207ENST00000415107 PPFIA4O75335 1185 aa13.51□□□□□ -0.25
ATG4B-207ENST00000415107 CABYRO75952 493 aa13.51□□□□□ -0.25
ATG4B-207ENST00000415107 TDP2O95551 362 aa13.51□□□□□ -0.25
ATG4B-207ENST00000415107 PGK1P00558 417 aa13.51□□□□□ -0.25
ATG4B-207ENST00000415107 C6orf222P0C671 652 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-207ENST00000415107 ARP10275 920 aa13.51□□□□□ -0.25
ATG4B-207ENST00000415107 ITGB3BPQ13352 177 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-207ENST00000415107 GNL2Q13823 731 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms