RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 LZTS2Q9BRK4 669 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 C6orf50Q9HD87 102 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 AJAP1Q9UKB5 411 aaPredicted RBP10.94□□□□□ -0.66
SS18-203ENST00000415083 LEMD3Q9Y2U8 911 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 ANKRD31Q8N7Z5 1873 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 PVALEFA0A1B0GWK0 134 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 CASP5P51878 434 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 COASYQ13057 564 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 SV2BQ7L1I2 683 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 TEX11Q8IYF3 940 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 MXD3Q9BW11 206 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 GBP3Q9H0R5 595 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 KCTD10Q9H3F6 313 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 MMRN2Q9H8L6 949 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 POLD4Q9HCU8 107 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 LRRC4BQ9NT99 713 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 ZPR1O75312 459 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 SMARCA1P28370 1054 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 KIF5AQ12840 1032 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 PRR5LQ6MZQ0 368 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 CERS5Q8N5B7 392 aa10.94□□□□□ -0.66
SS18-203ENST00000415083 PACSIN2Q9UNF0 486 aaPredicted RBP10.94□□□□□ -0.66
SS18-203ENST00000415083 ITIH3Q06033 890 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 CERS3Q8IU89 383 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 ZC3H3Q8IXZ2 948 aaKnown RBP10.93□□□□□ -0.66
SS18-203ENST00000415083 ADGRF4Q8IZF3 695 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 FNBP4Q8N3X1 1017 aaPredicted RBP10.93□□□□□ -0.66
SS18-203ENST00000415083 FAM163AQ96GL9 167 aaPredicted RBP10.93□□□□□ -0.66
SS18-203ENST00000415083 PCMTD1Q96MG8 357 aaPredicted RBP10.93□□□□□ -0.66
SS18-203ENST00000415083 TBC1D7Q9P0N9 293 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 ATF5Q9Y2D1 282 aaPredicted RBP10.93□□□□□ -0.66
SS18-203ENST00000415083 E9PMD0 336 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 TUBBP07437 444 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 TAL1P17542 331 aaPredicted RBP10.93□□□□□ -0.66
SS18-203ENST00000415083 SLC16A2P36021 539 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 CRY2Q49AN0 593 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 AFAP1L1Q8TED9 768 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 RPGRIP1Q96KN7 1286 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 NLRC4Q9NPP4 1024 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 FAM184BQ9ULE4 1060 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 DAGLAQ9Y4D2 1042 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 BAG3O95817 575 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 KLRC1P26715 233 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 GNA11P29992 359 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 MATR3P43243 847 aaKnown RBP eCLIP10.93□□□□□ -0.669e-6■■■■□ 21.7
SS18-203ENST00000415083 PACS2Q86VP3 889 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 TRIM58Q8NG06 486 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 SCFD1Q8WVM8 642 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 GANQ9H2C0 597 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 GPCPD1Q9NPB8 672 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 STK17AQ9UEE5 414 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 ABCB11O95342 1321 aa10.93□□□□□ -0.66
SS18-203ENST00000415083 A0A087X0T9 212 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 ESYT3A0FGR9 886 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 FAM228BP0C875 321 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 ECHS1P30084 290 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 CARSP49589 748 aaKnown RBP10.92□□□□□ -0.66
SS18-203ENST00000415083 CKAP4Q07065 602 aaKnown RBP10.92□□□□□ -0.66
SS18-203ENST00000415083 PDIA5Q14554 519 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 TTC19Q6DKK2 380 aaPredicted RBP10.92□□□□□ -0.66
SS18-203ENST00000415083 SND1Q7KZF4 910 aaKnown RBP eCLIP10.92□□□□□ -0.66
SS18-203ENST00000415083 FAM114A1Q8IWE2 563 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 SNX29Q8TEQ0 813 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 CRACR2AQ9BSW2 395 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 IKZF4Q9H2S9 585 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 LRRC4CQ9HCJ2 640 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 STAT3P40763 770 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 IRAK1P51617 712 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 HYIQ5T013 277 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 ZFPM1Q8IX07 1006 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 EHBP1Q8NDI1 1231 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 GOLPH3Q9H4A6 298 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 RABEP2Q9H5N1 569 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 DNAJC18Q9H819 358 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 RSPH14Q9UHP6 348 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 PCDHAC2Q9Y5I4 1007 aa10.92□□□□□ -0.66
SS18-203ENST00000415083 ACTN1P12814 892 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 SHMT1P34896 483 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 PSMC6P62333 389 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 SPIRE1Q08AE8 756 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 FAM83BQ5T0W9 1011 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 TRIM59Q8IWR1 403 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 PROCA1Q8NCQ7 364 aaPredicted RBP10.91□□□□□ -0.66
SS18-203ENST00000415083 CALML4Q96GE6 196 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 RIC8AQ9NPQ8 531 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 ZNHIT6Q9NWK9 470 aaKnown RBP10.91□□□□□ -0.66
SS18-203ENST00000415083 SRCAPQ6ZRS2 3230 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 ZNF233A6NK53 670 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 USP17L10C9JJH3 530 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 BHMG1C9JSJ3 638 aaPredicted RBP10.91□□□□□ -0.66
SS18-203ENST00000415083 UFL1O94874 794 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 MYBP10242 640 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 MAGEA1P43355 309 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 NOP2P46087 812 aaKnown RBP10.91□□□□□ -0.66
SS18-203ENST00000415083 NT5C2P49902 561 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 ADCY7P51828 1080 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 GSTO1P78417 241 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 LRRC63Q05C16 580 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 PPP4R3AQ6IN85 833 aa10.91□□□□□ -0.66
SS18-203ENST00000415083 DPP8Q6V1X1 898 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms