RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 REXO1Q8N1G1 1221 aaKnown RBP12.72□□□□□ -0.37
SCN4B-202ENST00000415030 RNPC3Q96LT9 517 aaKnown RBP12.72□□□□□ -0.37
SCN4B-202ENST00000415030 RBM12Q9NTZ6 932 aaKnown RBP12.72□□□□□ -0.37
SCN4B-202ENST00000415030 COL4A3BPQ9Y5P4 624 aa12.72□□□□□ -0.37
SCN4B-202ENST00000415030 NCK2O43639 380 aa12.72□□□□□ -0.37
SCN4B-202ENST00000415030 RPL13P26373 211 aaKnown RBP12.72□□□□□ -0.37
SCN4B-202ENST00000415030 SLC4A8Q2Y0W8 1093 aa12.72□□□□□ -0.37
SCN4B-202ENST00000415030 DENND2CQ68D51 928 aa12.72□□□□□ -0.37
SCN4B-202ENST00000415030 TTI2Q6NXR4 508 aa12.72□□□□□ -0.37
SCN4B-202ENST00000415030 ARHGAP27Q6ZUM4 889 aa12.72□□□□□ -0.37
SCN4B-202ENST00000415030 UNC13DQ70J99 1090 aa12.72□□□□□ -0.37
SCN4B-202ENST00000415030 DAAM2Q86T65 1068 aa12.72□□□□□ -0.37
SCN4B-202ENST00000415030 PARP9Q8IXQ6 854 aa12.72□□□□□ -0.37
SCN4B-202ENST00000415030 PROM2Q8N271 834 aa12.72□□□□□ -0.37
SCN4B-202ENST00000415030 CCDC63Q8NA47 563 aa12.72□□□□□ -0.37
SCN4B-202ENST00000415030 MED15Q96RN5 788 aa12.72□□□□□ -0.37
SCN4B-202ENST00000415030 REXO2Q9Y3B8 237 aaKnown RBP12.72□□□□□ -0.37
SCN4B-202ENST00000415030 SMCO2A6NFE2 343 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 SRRM3A6NNA2 597 aaPredicted RBP12.71□□□□□ -0.37
SCN4B-202ENST00000415030 ABL1P00519 1130 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 HAUS3Q68CZ6 603 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 PDXDC1Q6P996 788 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 TEX2Q8IWB9 1127 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 TRIM9Q9C026 710 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 BCS1LQ9Y276 419 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 NID2Q14112 1375 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 KRT13P13646 458 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 ATP5DP30049 168 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 PPP2R2AP63151 447 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 CHRNDQ07001 517 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 CREG2Q8IUH2 290 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 GUF1Q8N442 669 aaKnown RBP12.71□□□□□ -0.37
SCN4B-202ENST00000415030 UBA5Q9GZZ9 404 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 HDAC9Q9UKV0 1011 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 AMFRQ9UKV5 643 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 GJA3Q9Y6H8 435 aa12.71□□□□□ -0.37
SCN4B-202ENST00000415030 ESYT3A0FGR9 886 aa12.71□□□□□ -0.38
SCN4B-202ENST00000415030 MYO1FO00160 1098 aa12.71□□□□□ -0.38
SCN4B-202ENST00000415030 ERCC3P19447 782 aa12.71□□□□□ -0.38
SCN4B-202ENST00000415030 UBE4AQ14139 1066 aa12.71□□□□□ -0.38
SCN4B-202ENST00000415030 SEPT2Q15019 361 aa12.71□□□□□ -0.38
SCN4B-202ENST00000415030 SEC23AQ15436 765 aa12.71□□□□□ -0.38
SCN4B-202ENST00000415030 PKN1Q16512 942 aa12.71□□□□□ -0.38
SCN4B-202ENST00000415030 SRBD1Q8N5C6 995 aaKnown RBP12.71□□□□□ -0.38
SCN4B-202ENST00000415030 ERMNQ8TAM6 284 aa12.71□□□□□ -0.38
SCN4B-202ENST00000415030 CCHCR1Q8TD31 782 aa12.71□□□□□ -0.38
SCN4B-202ENST00000415030 PARP2Q9UGN5 583 aa12.71□□□□□ -0.38
SCN4B-202ENST00000415030 NOVA2Q9UNW9 492 aaKnown RBP12.71□□□□□ -0.38
SCN4B-202ENST00000415030 CNTNAP5Q8WYK1 1306 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 RGS16O15492 202 aaPredicted RBP12.7□□□□□ -0.38
SCN4B-202ENST00000415030 ELF1P32519 619 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 GFPT1Q06210 699 aaPredicted RBP12.7□□□□□ -0.38
SCN4B-202ENST00000415030 ORC2Q13416 577 aaPredicted RBP12.7□□□□□ -0.38
SCN4B-202ENST00000415030 SLMAPQ14BN4 828 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 FAM26FQ5R3K3 315 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 DGKHQ86XP1 1220 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 MYCBPAPQ8TBZ2 947 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 ZNF507Q8TCN5 953 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 C7orf25Q9BPX7 421 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 NT5C3AQ9H0P0 336 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 VCPKMTQ9H867 229 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 GGA2Q9UJY4 613 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 JAG2Q9Y219 1238 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 CAPN6Q9Y6Q1 641 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 ABCB11O95342 1321 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 ORC4O43929 436 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 H2AFZP0C0S5 128 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 GBP1P32455 592 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 CARSP49589 748 aaKnown RBP12.7□□□□□ -0.38
SCN4B-202ENST00000415030 H2AFVQ71UI9 128 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 PRPF38AQ8NAV1 312 aaKnown RBP12.7□□□□□ -0.38
SCN4B-202ENST00000415030 FLAD1Q8NFF5 587 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 PLCD4Q9BRC7 762 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 DUSP10Q9Y6W6 482 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 ACTN3Q08043 901 aaPredicted RBP12.7□□□□□ -0.38
SCN4B-202ENST00000415030 CDC37Q16543 378 aaPredicted RBP12.7□□□□□ -0.38
SCN4B-202ENST00000415030 PLVAPQ9BX97 442 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 TRIM7Q9C029 511 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 PDE2AO00408 941 aaPredicted RBP12.7□□□□□ -0.38
SCN4B-202ENST00000415030 NEBLO76041 1014 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 ATP11AP98196 1134 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 TROAPQ12815 778 aa12.7□□□□□ -0.38
SCN4B-202ENST00000415030 MYBL2P10244 700 aa12.69□□□□□ -0.38
SCN4B-202ENST00000415030 IL6STP40189 918 aaPredicted RBP12.69□□□□□ -0.38
SCN4B-202ENST00000415030 TNNI2P48788 182 aa12.69□□□□□ -0.38
SCN4B-202ENST00000415030 DYNLL1P63167 89 aaKnown RBP12.69□□□□□ -0.38
SCN4B-202ENST00000415030 EZH2Q15910 746 aaKnown RBP12.69□□□□□ -0.38
SCN4B-202ENST00000415030 WDR59Q6PJI9 974 aa12.69□□□□□ -0.38
SCN4B-202ENST00000415030 SYNE4Q8N205 404 aa12.69□□□□□ -0.38
SCN4B-202ENST00000415030 CTNNBL1Q8WYA6 563 aaPredicted RBP12.69□□□□□ -0.38
SCN4B-202ENST00000415030 EYA3Q99504 573 aa12.69□□□□□ -0.38
SCN4B-202ENST00000415030 SH3GL2Q99962 352 aa12.69□□□□□ -0.38
SCN4B-202ENST00000415030 KDM3AQ9Y4C1 1321 aa12.69□□□□□ -0.38
SCN4B-202ENST00000415030 CTNND1O60716 968 aaKnown RBP12.69□□□□□ -0.38
SCN4B-202ENST00000415030 HLFQ16534 295 aa12.69□□□□□ -0.38
SCN4B-202ENST00000415030 HERC4Q5GLZ8 1057 aaPredicted RBP12.69□□□□□ -0.38
SCN4B-202ENST00000415030 CYFIP2Q96F07 1278 aa12.69□□□□□ -0.38
SCN4B-202ENST00000415030 SUFUQ9UMX1 484 aa12.69□□□□□ -0.38
SCN4B-202ENST00000415030 CYP2D7A0A087X1C5 515 aa12.69□□□□□ -0.38
SCN4B-202ENST00000415030 SMIM23A6NLE4 172 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms