RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ARP10275 920 aa15.06■□□□□ 0
CNN3-203ENST00000415017 TGFB3P10600 412 aa15.06■□□□□ 0
CNN3-203ENST00000415017 MYCLP12524 364 aaPredicted RBP15.06■□□□□ 0
CNN3-203ENST00000415017 ATP2B1P20020 1258 aa15.06■□□□□ 0
CNN3-203ENST00000415017 PDE4DQ08499 809 aa15.06■□□□□ 0
CNN3-203ENST00000415017 SPIRE1Q08AE8 756 aa15.06■□□□□ 0
CNN3-203ENST00000415017 CCL14Q16627 93 aa15.06■□□□□ 0
CNN3-203ENST00000415017 FOXD4L6Q3SYB3 417 aaPredicted RBP15.06■□□□□ 0
CNN3-203ENST00000415017 AXDND1Q5T1B0 1012 aaPredicted RBP15.06■□□□□ 0
CNN3-203ENST00000415017 CCDC62Q6P9F0 684 aa15.06■□□□□ 0
CNN3-203ENST00000415017 FOXD4L3Q6VB84 417 aaPredicted RBP15.06■□□□□ 0
CNN3-203ENST00000415017 PLA2G4DQ86XP0 818 aa15.06■□□□□ 0
CNN3-203ENST00000415017 TRMT44Q8IYL2 757 aaKnown RBP15.06■□□□□ 0
CNN3-203ENST00000415017 FAM20AQ96MK3 541 aa15.06■□□□□ 0
CNN3-203ENST00000415017 VTA1Q9NP79 307 aa15.06■□□□□ 0
CNN3-203ENST00000415017 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.06■□□□□ 0
CNN3-203ENST00000415017 NRBP1Q9UHY1 535 aa15.06■□□□□ 0
CNN3-203ENST00000415017 FBXO2Q9UK22 296 aaPredicted RBP15.06■□□□□ 0
CNN3-203ENST00000415017 SRPRBQ9Y5M8 271 aaKnown RBP15.06■□□□□ 0
CNN3-203ENST00000415017 MRVI1Q9Y6F6 885 aa15.06■□□□□ 0
CNN3-203ENST00000415017 SPTLC2O15270 562 aa15.05■□□□□ -0
CNN3-203ENST00000415017 FIBPO43427 364 aa15.05■□□□□ -0
CNN3-203ENST00000415017 PSMD10O75832 226 aa15.05■□□□□ -0
CNN3-203ENST00000415017 OR52Z1P0C646 297 aa15.05■□□□□ -0
CNN3-203ENST00000415017 HSPA8P11142 646 aaKnown RBP15.05■□□□□ -0
CNN3-203ENST00000415017 HOXD10P28358 340 aa15.05■□□□□ -0
CNN3-203ENST00000415017 FXR2P51116 673 aaKnown RBP eCLIP15.05■□□□□ -0
CNN3-203ENST00000415017 ARHGEF6Q15052 776 aa15.05■□□□□ -0
CNN3-203ENST00000415017 PRR16Q569H4 304 aa15.05■□□□□ -0
CNN3-203ENST00000415017 KCNG4Q8TDN1 519 aa15.05■□□□□ -0
CNN3-203ENST00000415017 PXYLP1Q8TE99 480 aa15.05■□□□□ -0
CNN3-203ENST00000415017 ZFP91Q96JP5 570 aaPredicted RBP15.05■□□□□ -0
CNN3-203ENST00000415017 CDHR1Q96JP9 859 aa15.05■□□□□ -0
CNN3-203ENST00000415017 RIT2Q99578 217 aa15.05■□□□□ -0
CNN3-203ENST00000415017 SENP7Q9BQF6 1050 aa15.05■□□□□ -0
CNN3-203ENST00000415017 ABHD16BQ9H3Z7 469 aa15.05■□□□□ -0
CNN3-203ENST00000415017 AGO4Q9HCK5 861 aaKnown RBP15.05■□□□□ -0
CNN3-203ENST00000415017 TSKSQ9UJT2 592 aa15.05■□□□□ -0
CNN3-203ENST00000415017 NFASCO94856 1347 aa15.04■□□□□ -0
CNN3-203ENST00000415017 FOXN1O15353 648 aa15.04■□□□□ -0
CNN3-203ENST00000415017 ATP9AO75110 1047 aa15.04■□□□□ -0
CNN3-203ENST00000415017 ZNF865P0CJ78 1059 aaPredicted RBP15.04■□□□□ -0
CNN3-203ENST00000415017 KCNA2P16389 499 aa15.04■□□□□ -0
CNN3-203ENST00000415017 CYP2B6P20813 491 aa15.04■□□□□ -0
CNN3-203ENST00000415017 ZNF76P36508 570 aa15.04■□□□□ -0
CNN3-203ENST00000415017 CEBPZQ03701 1054 aaKnown RBP15.04■□□□□ -0
CNN3-203ENST00000415017 ITGB3BPQ13352 177 aaPredicted RBP15.04■□□□□ -0
CNN3-203ENST00000415017 MTMR1Q13613 665 aa15.04■□□□□ -0
CNN3-203ENST00000415017 PDIA5Q14554 519 aa15.04■□□□□ -0
CNN3-203ENST00000415017 CALCRLQ16602 461 aa15.04■□□□□ -0
CNN3-203ENST00000415017 GNPTABQ3T906 1256 aa15.04■□□□□ -0
CNN3-203ENST00000415017 MAP3K21Q5TCX8 1036 aa15.04■□□□□ -0
CNN3-203ENST00000415017 KCNV1Q6PIU1 500 aa15.04■□□□□ -0
CNN3-203ENST00000415017 OTOP1Q7RTM1 612 aa15.04■□□□□ -0
CNN3-203ENST00000415017 NLRX1Q86UT6 975 aa15.04■□□□□ -0
CNN3-203ENST00000415017 SLFN12Q8IYM2 578 aa15.04■□□□□ -0
CNN3-203ENST00000415017 IGSF22Q8N9C0 903 aa15.04■□□□□ -0
CNN3-203ENST00000415017 ZNF579Q8NAF0 562 aaKnown RBP15.04■□□□□ -0
CNN3-203ENST00000415017 TRIB2Q92519 343 aa15.04■□□□□ -0
CNN3-203ENST00000415017 FERMT2Q96AC1 680 aa15.04■□□□□ -0
CNN3-203ENST00000415017 SPATA32Q96LK8 384 aa15.04■□□□□ -0
CNN3-203ENST00000415017 DDX41Q9UJV9 622 aaKnown RBP15.04■□□□□ -0
CNN3-203ENST00000415017 VAV3Q9UKW4 847 aa15.04■□□□□ -0
CNN3-203ENST00000415017 FAM237AA0A1B0GTK4 181 aa15.03■□□□□ -0
CNN3-203ENST00000415017 IPO5O00410 1097 aaKnown RBP15.03■□□□□ -0
CNN3-203ENST00000415017 SP2Q02086 613 aa15.03■□□□□ -0
CNN3-203ENST00000415017 ACVR2BQ13705 512 aa15.03■□□□□ -0
CNN3-203ENST00000415017 STK38Q15208 465 aa15.03■□□□□ -0
CNN3-203ENST00000415017 GBP4Q96PP9 640 aa15.03■□□□□ -0
CNN3-203ENST00000415017 PCDHA7Q9UN72 937 aa15.03■□□□□ -0
CNN3-203ENST00000415017 FRMPD3Q5JV73 1810 aa15.02■□□□□ -0
CNN3-203ENST00000415017 CUTAO60888 179 aa15.02■□□□□ -0
CNN3-203ENST00000415017 ARIH2O95376 493 aa15.02■□□□□ -0
CNN3-203ENST00000415017 GRIN1Q05586 938 aa15.02■□□□□ -0
CNN3-203ENST00000415017 PPP2R5CQ13362 524 aa15.02■□□□□ -0
CNN3-203ENST00000415017 ADALQ6DHV7 355 aa15.02■□□□□ -0
CNN3-203ENST00000415017 KRI1Q8N9T8 703 aaKnown RBP15.02■□□□□ -0
CNN3-203ENST00000415017 SCFD2Q8WU76 684 aa15.02■□□□□ -0
CNN3-203ENST00000415017 ZNF577Q9BSK1 485 aa15.02■□□□□ -0
CNN3-203ENST00000415017 GDPD2Q9HCC8 539 aa15.02■□□□□ -0
CNN3-203ENST00000415017 PDGFCQ9NRA1 345 aa15.02■□□□□ -0
CNN3-203ENST00000415017 TBC1D22BQ9NU19 505 aa15.02■□□□□ -0
CNN3-203ENST00000415017 CENPFP49454 3210 aa15.02□□□□□ -0.01
CNN3-203ENST00000415017 A0A1W2PQ27 194 aa15.01□□□□□ -0.01
CNN3-203ENST00000415017 A0A1W2PQ64 194 aa15.01□□□□□ -0.01
CNN3-203ENST00000415017 A0A1W2PQD8 194 aa15.01□□□□□ -0.01
CNN3-203ENST00000415017 ECM2O94769 699 aaPredicted RBP15.01□□□□□ -0.01
CNN3-203ENST00000415017 CYBAP13498 195 aa15.01□□□□□ -0.01
CNN3-203ENST00000415017 MARCKSP29966 332 aaPredicted RBP15.01□□□□□ -0.01
CNN3-203ENST00000415017 CYP2C19P33261 490 aa15.01□□□□□ -0.01
CNN3-203ENST00000415017 LONP1P36776 959 aaKnown RBP15.01□□□□□ -0.01
CNN3-203ENST00000415017 IQSEC1Q6DN90 963 aa15.01□□□□□ -0.01
CNN3-203ENST00000415017 DTHD1Q6ZMT9 781 aa15.01□□□□□ -0.01
CNN3-203ENST00000415017 FBXO16Q8IX29 292 aaPredicted RBP15.01□□□□□ -0.01
CNN3-203ENST00000415017 TRPV1Q8NER1 839 aa15.01□□□□□ -0.01
CNN3-203ENST00000415017 EMID1Q96A84 441 aaPredicted RBP15.01□□□□□ -0.01
CNN3-203ENST00000415017 AK8Q96MA6 479 aa15.01□□□□□ -0.01
CNN3-203ENST00000415017 TTC12Q9H892 705 aaPredicted RBP15.01□□□□□ -0.01
CNN3-203ENST00000415017 LMBRD1Q9NUN5 540 aa15.01□□□□□ -0.01
CNN3-203ENST00000415017 PCDHA12Q9UN75 941 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms