RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TTF1Q15361 905 aaPredicted RBP5.86□□□□□ -1.47
VPS41-205ENST00000414632 SHROOM1Q2M3G4 852 aaPredicted RBP5.86□□□□□ -1.47
VPS41-205ENST00000414632 DCAF15Q66K64 600 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 ANKRD13AQ8IZ07 590 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.86□□□□□ -1.47
VPS41-205ENST00000414632 PI4K2BQ8TCG2 481 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 SDR42E1Q8WUS8 393 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 GCC1Q96CN9 775 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 RHOVQ96L33 236 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 NECAB3Q96P71 396 aaPredicted RBP5.86□□□□□ -1.47
VPS41-205ENST00000414632 ZNF341Q9BYN7 854 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 BHLHE41Q9C0J9 482 aaPredicted RBP5.86□□□□□ -1.47
VPS41-205ENST00000414632 PALD1Q9ULE6 856 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 CSADQ9Y600 493 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 SNCAIPQ9Y6H5 919 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 TTC41PQ6P2S7 1318 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 SALL3Q9BXA9 1300 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 CYP2D7A0A087X1C5 515 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 ZBTB42B2RXF5 422 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 J3QW42 95 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 SMIM22K7EJ46 135 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 M0R2C6 588 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 PDE2AO00408 941 aaPredicted RBP5.85□□□□□ -1.47
VPS41-205ENST00000414632 ENC1O14682 589 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 CYP2D6P10635 497 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 HSPA8P11142 646 aaKnown RBP5.85□□□□□ -1.47
VPS41-205ENST00000414632 GARTP22102 1010 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 ETFBP38117 255 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 SOX9P48436 509 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 MLLT1Q03111 559 aaPredicted RBP5.85□□□□□ -1.47
VPS41-205ENST00000414632 LMNB2Q03252 620 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 CAMK2GQ13555 558 aaPredicted RBP5.85□□□□□ -1.47
VPS41-205ENST00000414632 RRP1BQ14684 758 aaKnown RBP5.85□□□□□ -1.47
VPS41-205ENST00000414632 TTBK2Q6IQ55 1244 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 CHD1LQ86WJ1 897 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 SMC5Q8IY18 1101 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 CRIPAKQ8N1N5 446 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 CCDC155Q8N6L0 562 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 TMEM102Q8N9M5 508 aaPredicted RBP5.85□□□□□ -1.47
VPS41-205ENST00000414632 GOLM1Q8NBJ4 401 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 ASAP3Q8TDY4 903 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 SEC62Q99442 399 aaKnown RBP5.85□□□□□ -1.47
VPS41-205ENST00000414632 RIOK1Q9BRS2 568 aaKnown RBP5.85□□□□□ -1.47
VPS41-205ENST00000414632 FSD1Q9BTV5 496 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.85□□□□□ -1.471e-7■■■■□ 19.4
VPS41-205ENST00000414632 PUS7LQ9H0K6 701 aaKnown RBP5.85□□□□□ -1.47
VPS41-205ENST00000414632 IGFLR1Q9H665 355 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.85□□□□□ -1.47
VPS41-205ENST00000414632 ATP13A2Q9NQ11 1180 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 UBP1Q9NZI7 540 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 MRVI1Q9Y6F6 885 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 LOC285556D6RIA3 1793 aa5.85□□□□□ -1.47
VPS41-205ENST00000414632 COL2A1P02458 1487 aaPredicted RBP5.84□□□□□ -1.47
VPS41-205ENST00000414632 MYH4Q9Y623 1939 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 MGAMO43451 1857 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 CCL15-CCL14A0A0B4J2E2 113 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 ANKRD62A6NC57 917 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 IGF2BP3O00425 579 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS41-205ENST00000414632 ERC2O15083 957 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 PAGE1O75459 146 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 GLRX3O76003 335 aaKnown RBP5.84□□□□□ -1.47
VPS41-205ENST00000414632 GDF11O95390 407 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 TBC1D8O95759 1140 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 NCLP19338 710 aaKnown RBP5.84□□□□□ -1.47
VPS41-205ENST00000414632 TFE3P19532 575 aaPredicted RBP5.84□□□□□ -1.47
VPS41-205ENST00000414632 CTCFP49711 727 aaPredicted RBP5.84□□□□□ -1.47
VPS41-205ENST00000414632 PDE1AP54750 535 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 JAG1P78504 1218 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 NUCB1Q02818 461 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 APOBRQ0VD83 1088 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 FAAP100Q0VG06 881 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 COL9A2Q14055 689 aaPredicted RBP5.84□□□□□ -1.47
VPS41-205ENST00000414632 CCL15Q16663 113 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 RPS26P11Q5JNZ5 115 aaPredicted RBP5.84□□□□□ -1.47
VPS41-205ENST00000414632 SNAP47Q5SQN1 464 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 SDE2Q6IQ49 451 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 ZNF746Q6NUN9 644 aaPredicted RBP5.84□□□□□ -1.47
VPS41-205ENST00000414632 AGMOQ6ZNB7 445 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 CCDC129Q6ZRS4 1044 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 ZNF662Q6ZS27 426 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 HFE2Q6ZVN8 426 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 SKAP1Q86WV1 359 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 STK11IPQ8N1F8 1099 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 CRACR2BQ8N4Y2 399 aaPredicted RBP5.84□□□□□ -1.47
VPS41-205ENST00000414632 KBTBD3Q8NAB2 608 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 CPLX3Q8WVH0 158 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 GTPBP3Q969Y2 492 aaKnown RBP5.84□□□□□ -1.47
VPS41-205ENST00000414632 HOOK2Q96ED9 719 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 PBX4Q9BYU1 374 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 CRNKL1Q9BZJ0 848 aaKnown RBP5.84□□□□□ -1.47
VPS41-205ENST00000414632 RASSF4Q9H2L5 321 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 R3HDMLQ9H3Y0 253 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 DNAJC18Q9H819 358 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 RNF186Q9NXI6 227 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 ATXN7L1Q9ULK2 861 aaPredicted RBP5.84□□□□□ -1.47
VPS41-205ENST00000414632 SLC4A4Q9Y6R1 1079 aa5.84□□□□□ -1.47
VPS41-205ENST00000414632 LAMA4Q16363 1823 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 MANSC4A6NHS7 340 aaPredicted RBP5.83□□□□□ -1.48
VPS41-205ENST00000414632 K7ELQ4 463 aaPredicted RBP5.83□□□□□ -1.48
VPS41-205ENST00000414632 RNF113AO15541 343 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms