RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 MYL3P08590 195 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 HOXB3P14651 431 aaPredicted RBP9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 ALDH5A1P51649 535 aaPredicted RBP9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 PURAQ00577 322 aaKnown RBP9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 TFAP4Q01664 338 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 PDE4BQ07343 736 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 NMIQ13287 307 aaPredicted RBP9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 PROX2Q3B8N5 592 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 DUSP28Q4G0W2 176 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 TMEM67Q5HYA8 995 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 TTC22Q5TAA0 569 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 KIAA1211Q6ZU35 1233 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 SPRED2Q7Z698 418 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 RPUSD2Q8IZ73 545 aaKnown RBP9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 MORC4Q8TE76 937 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 CHURC1Q8WUH1 139 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 FAM227BQ96M60 508 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 SEZ6LQ9BYH1 1024 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 NAPBQ9H115 298 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 ALG2Q9H553 416 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 STX8Q9UNK0 236 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 Q9Y3F1 56 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 MTCH2Q9Y6C9 303 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 NLRC5Q86WI3 1866 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 MUC6Q6W4X9 2439 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 RBAK-RBAKDNI3L0D1 243 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 HIP1O00291 1037 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 NFIBO00712 420 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 FOXP2O15409 715 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 PLA2G6O60733 806 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 PFKMP08237 780 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 GSPT1P15170 499 aaKnown RBP9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 CCDC96Q2M329 555 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 IQSEC1Q6DN90 963 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 SLC30A10Q6XR72 485 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 PNMA1Q8ND90 353 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 OR6J1Q8NGC5 347 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 SLC9A7Q96T83 725 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 C1QTNF1Q9BXJ1 281 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 IL17RBQ9NRM6 502 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 HELLSQ9NRZ9 838 aa9.7□□□□□ -0.86
UPF3AP1-201ENST00000413731 TSPY2A6NKD2 308 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 ICAM1P05362 532 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 SDSP20132 328 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 SOX11P35716 441 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 TAP1Q03518 808 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 BAATQ14032 418 aaPredicted RBP9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 AAK1Q2M2I8 961 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 MCMDC2Q4G0Z9 681 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 FAM47CQ5HY64 1035 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 TTBK2Q6IQ55 1244 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 RCSD1Q6JBY9 416 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 CCDC171Q6TFL3 1326 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 TICAM2Q86XR7 235 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 ARNTL2Q8WYA1 636 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 MTG1Q9BT17 334 aaPredicted RBP9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 WDR11Q9BZH6 1224 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 RANBP17Q9H2T7 1088 aaKnown RBP9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 EPHX3Q9H6B9 360 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 VRTNQ9H8Y1 702 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 INCENPQ9NQS7 918 aa9.69□□□□□ -0.86
UPF3AP1-201ENST00000413731 FRMPD2Q68DX3 1309 aaPredicted RBP9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 PTPDC1A2A3K4 754 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 CFAP99D6REC4 459 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 LPXNO60711 386 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 SLC3A2P08195 630 aaKnown RBP9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 SUPT20HL2P0C7V6 817 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 ACTN1P12814 892 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 POU3F3P20264 500 aaPredicted RBP9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 RFC2P35250 354 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 SLC16A2P36021 539 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 CPT1AP50416 773 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 GRB10Q13322 594 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 PPP2R5BQ15173 497 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 NBPF20Q3BBV1 942 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 SWT1Q5T5J6 900 aaKnown RBP9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 CWC27Q6UX04 472 aaKnown RBP9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 ZNF589Q86UQ0 364 aaPredicted RBP9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 HERC6Q8IVU3 1022 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 PRR7Q8TB68 274 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 EPS8L1Q8TE68 723 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 GDPD5Q8WTR4 605 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 COPS5Q92905 334 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 KCNK17Q96T54 332 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 LRFN3Q9BTN0 628 aa9.68□□□□□ -0.86
UPF3AP1-201ENST00000413731 RAD50Q92878 1312 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 RBM47A0AV96 593 aaKnown RBP9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 LCHNA4D1U4 455 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 FAM86C2PA6NEL3 165 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 GPR37L1O60883 481 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 IQCF3P0C7M6 154 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 CALML3P27482 149 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 VPS53Q5VIR6 699 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 SYDE2Q5VT97 1194 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 NFRKBQ6P4R8 1299 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 TMCO2Q7Z6W1 182 aaPredicted RBP9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 SKAP1Q86WV1 359 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 DCAF4Q8WV16 495 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 CLEC4DQ8WXI8 215 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms