RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 PPP1R18Q6NYC8 613 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 ZNF713Q8N859 430 aaPredicted RBP17.01■□□□□ 0.31
LIMS4-201ENST00000413601 PHKBQ93100 1093 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 EMID1Q96A84 441 aaPredicted RBP17.01■□□□□ 0.31
LIMS4-201ENST00000413601 INPP4AQ96PE3 977 aaPredicted RBP17.01■□□□□ 0.31
LIMS4-201ENST00000413601 BCAS3Q9H6U6 928 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 NCOA5Q9HCD5 579 aaKnown RBP17.01■□□□□ 0.31
LIMS4-201ENST00000413601 RIC8AQ9NPQ8 531 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 PDRG1Q9NUG6 133 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 BARHL2Q9NY43 387 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 PCDHA6Q9UN73 950 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 PCDHA8Q9Y5H6 950 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 SMCO2A6NFE2 343 aa17■□□□□ 0.31
LIMS4-201ENST00000413601 PRPF3O43395 683 aaKnown RBP17■□□□□ 0.31
LIMS4-201ENST00000413601 PPFIA3O75145 1194 aa17■□□□□ 0.31
LIMS4-201ENST00000413601 SCG2P13521 617 aa17■□□□□ 0.31
LIMS4-201ENST00000413601 ADCY7P51828 1080 aa17■□□□□ 0.31
LIMS4-201ENST00000413601 NTRK3Q16288 839 aa17■□□□□ 0.31
LIMS4-201ENST00000413601 DGKDQ16760 1214 aa17■□□□□ 0.31
LIMS4-201ENST00000413601 FAM47CQ5HY64 1035 aa17■□□□□ 0.31
LIMS4-201ENST00000413601 XRRA1Q6P2D8 792 aa17■□□□□ 0.31
LIMS4-201ENST00000413601 PPTC7Q8NI37 304 aa17■□□□□ 0.31
LIMS4-201ENST00000413601 SPATA33Q96N06 139 aa17■□□□□ 0.31
LIMS4-201ENST00000413601 PPP1R12CQ9BZL4 782 aa17■□□□□ 0.31
LIMS4-201ENST00000413601 ALDH8A1Q9H2A2 487 aaPredicted RBP17■□□□□ 0.31
LIMS4-201ENST00000413601 SPATA31C2B4DYI2 1134 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 SLC34A2O95436 690 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 SEC24BO95487 1268 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 ICAM3P32942 547 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 EPHB4P54760 987 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 FPGSQ05932 587 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 SEMA3FQ13275 785 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 SHHQ15465 462 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 PKN1Q16512 942 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 HSDL1Q3SXM5 330 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 KAT2BQ92831 832 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 PGBD1Q96JS3 809 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 MLXIPQ9HAP2 919 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 TRMT13Q9NUP7 481 aaKnown RBP16.99■□□□□ 0.31
LIMS4-201ENST00000413601 SCN5AQ14524 2016 aa16.99■□□□□ 0.31
LIMS4-201ENST00000413601 FIBPO43427 364 aa16.98■□□□□ 0.31
LIMS4-201ENST00000413601 ZNF286BP0CG31 522 aa16.98■□□□□ 0.31
LIMS4-201ENST00000413601 IFNAR1P17181 557 aa16.98■□□□□ 0.31
LIMS4-201ENST00000413601 CYP2C18P33260 490 aa16.98■□□□□ 0.31
LIMS4-201ENST00000413601 ANAPC15P60006 121 aa16.98■□□□□ 0.31
LIMS4-201ENST00000413601 AKAP17AQ02040 695 aaKnown RBP16.98■□□□□ 0.31
LIMS4-201ENST00000413601 STK3Q13188 491 aa16.98■□□□□ 0.31
LIMS4-201ENST00000413601 C9orf50Q5SZB4 431 aa16.98■□□□□ 0.31
LIMS4-201ENST00000413601 MFSD5Q6N075 450 aa16.98■□□□□ 0.31
LIMS4-201ENST00000413601 NFRKBQ6P4R8 1299 aa16.98■□□□□ 0.31
LIMS4-201ENST00000413601 ZNF274Q96GC6 653 aaPredicted RBP16.98■□□□□ 0.31
LIMS4-201ENST00000413601 LRCH3Q96II8 777 aa16.98■□□□□ 0.31
LIMS4-201ENST00000413601 SLC26A6Q9BXS9 759 aa16.98■□□□□ 0.31
LIMS4-201ENST00000413601 TMEM260Q9NX78 707 aa16.98■□□□□ 0.31
LIMS4-201ENST00000413601 UMODL1Q5DID0 1318 aa16.97■□□□□ 0.31
LIMS4-201ENST00000413601 PPFIA4O75335 1185 aa16.97■□□□□ 0.31
LIMS4-201ENST00000413601 NEDD9Q14511 834 aa16.97■□□□□ 0.31
LIMS4-201ENST00000413601 LRIT3Q3SXY7 679 aa16.97■□□□□ 0.31
LIMS4-201ENST00000413601 CYFIP1Q7L576 1253 aa16.97■□□□□ 0.31
LIMS4-201ENST00000413601 NLRX1Q86UT6 975 aa16.97■□□□□ 0.31
LIMS4-201ENST00000413601 RNF26Q9BY78 433 aaPredicted RBP16.97■□□□□ 0.31
LIMS4-201ENST00000413601 HIPK3Q9H422 1215 aa16.97■□□□□ 0.31
LIMS4-201ENST00000413601 EHMT1Q9H9B1 1298 aa16.97■□□□□ 0.31
LIMS4-201ENST00000413601 KAT6AQ92794 2004 aa16.97■□□□□ 0.31
LIMS4-201ENST00000413601 ADAMTS3O15072 1205 aa16.96■□□□□ 0.31
LIMS4-201ENST00000413601 EIF5BO60841 1220 aaKnown RBP16.96■□□□□ 0.31
LIMS4-201ENST00000413601 FOSP01100 380 aaPredicted RBP16.96■□□□□ 0.31
LIMS4-201ENST00000413601 SUPT20HL2P0C7V6 817 aa16.96■□□□□ 0.31
LIMS4-201ENST00000413601 CYP2C9P11712 490 aa16.96■□□□□ 0.31
LIMS4-201ENST00000413601 HOXD8P13378 290 aaPredicted RBP16.96■□□□□ 0.31
LIMS4-201ENST00000413601 CSF2RAP15509 400 aa16.96■□□□□ 0.31
LIMS4-201ENST00000413601 ITGB5P18084 799 aa16.96■□□□□ 0.31
LIMS4-201ENST00000413601 CLK2P49760 499 aaKnown RBP16.96■□□□□ 0.31
LIMS4-201ENST00000413601 PSEN2P49810 448 aa16.96■□□□□ 0.31
LIMS4-201ENST00000413601 PTPN11Q06124 597 aaPredicted RBP16.96■□□□□ 0.31
LIMS4-201ENST00000413601 TEX2Q8IWB9 1127 aa16.96■□□□□ 0.31
LIMS4-201ENST00000413601 GPRASP2Q96D09 838 aa16.96■□□□□ 0.31
LIMS4-201ENST00000413601 ALG1Q9BT22 464 aa16.96■□□□□ 0.31
LIMS4-201ENST00000413601 NOC4LQ9BVI4 516 aaKnown RBP16.96■□□□□ 0.31
LIMS4-201ENST00000413601 ANO3Q9BYT9 981 aa16.96■□□□□ 0.31
LIMS4-201ENST00000413601 GLT8D2Q9H1C3 349 aa16.96■□□□□ 0.31
LIMS4-201ENST00000413601 UBIAD1Q9Y5Z9 338 aa16.96■□□□□ 0.31
LIMS4-201ENST00000413601 TANC1Q9C0D5 1861 aa16.96■□□□□ 0.31
LIMS4-201ENST00000413601 ATP9AO75110 1047 aa16.95■□□□□ 0.3
LIMS4-201ENST00000413601 F2P00734 622 aa16.95■□□□□ 0.3
LIMS4-201ENST00000413601 MFSD10Q14728 455 aa16.95■□□□□ 0.3
LIMS4-201ENST00000413601 KIAA0753Q2KHM9 967 aa16.95■□□□□ 0.3
LIMS4-201ENST00000413601 JAKMIP3Q5VZ66 844 aa16.95■□□□□ 0.3
LIMS4-201ENST00000413601 METTL7BQ6UX53 244 aa16.95■□□□□ 0.3
LIMS4-201ENST00000413601 TMEM199Q8N511 208 aa16.95■□□□□ 0.3
LIMS4-201ENST00000413601 CCDC12Q8WUD4 166 aaPredicted RBP16.95■□□□□ 0.3
LIMS4-201ENST00000413601 SENP7Q9BQF6 1050 aa16.95■□□□□ 0.3
LIMS4-201ENST00000413601 KATNAL1Q9BW62 490 aa16.95■□□□□ 0.3
LIMS4-201ENST00000413601 ZMYND12Q9H0C1 365 aa16.95■□□□□ 0.3
LIMS4-201ENST00000413601 TELO2Q9Y4R8 837 aa16.95■□□□□ 0.3
LIMS4-201ENST00000413601 ESYT2A0FGR8 921 aa16.94■□□□□ 0.3
LIMS4-201ENST00000413601 HAS3O00219 553 aa16.94■□□□□ 0.3
LIMS4-201ENST00000413601 NOP56O00567 594 aaKnown RBP16.94■□□□□ 0.3
LIMS4-201ENST00000413601 CPLX1O14810 134 aa16.94■□□□□ 0.3
LIMS4-201ENST00000413601 CCL23P55773 120 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms