RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 CNOT7Q9UIV1 285 aaKnown RBP6.6□□□□□ -1.35
LINC00342-201ENST00000412393 SHTN1A0MZ66 631 aa6.59□□□□□ -1.35
LINC00342-201ENST00000412393 CSF1RP07333 972 aa6.59□□□□□ -1.35
LINC00342-201ENST00000412393 SRFP11831 508 aa6.59□□□□□ -1.35
LINC00342-201ENST00000412393 IGHMBP2P38935 993 aaKnown RBP6.59□□□□□ -1.35
LINC00342-201ENST00000412393 FMR1Q06787 632 aaKnown RBP eCLIP6.59□□□□□ -1.35
LINC00342-201ENST00000412393 BEND3Q5T5X7 828 aa6.59□□□□□ -1.35
LINC00342-201ENST00000412393 NPAS4Q8IUM7 802 aa6.59□□□□□ -1.35
LINC00342-201ENST00000412393 DPF2Q92785 391 aa6.59□□□□□ -1.35
LINC00342-201ENST00000412393 EPB41L4BQ9H329 900 aa6.59□□□□□ -1.35
LINC00342-201ENST00000412393 NSUN3Q9H649 340 aaKnown RBP6.59□□□□□ -1.35
LINC00342-201ENST00000412393 PRDM10Q9NQV6 1147 aa6.59□□□□□ -1.35
LINC00342-201ENST00000412393 KCNQ5Q9NR82 932 aa6.59□□□□□ -1.35
LINC00342-201ENST00000412393 MINPP1Q9UNW1 487 aa6.59□□□□□ -1.35
LINC00342-201ENST00000412393 ZNF646O15015 1829 aaPredicted RBP6.59□□□□□ -1.35
LINC00342-201ENST00000412393 CNTNAP1P78357 1384 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 E9PSI1 815 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 GRM8O00222 908 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 TRAF5O00463 557 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 ALDH1L1O75891 902 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 VIL1P09327 827 aaKnown RBP6.58□□□□□ -1.36
LINC00342-201ENST00000412393 HSPA1AP0DMV8 641 aaKnown RBP6.58□□□□□ -1.36
LINC00342-201ENST00000412393 HSPA1BP0DMV9 641 aaKnown RBP6.58□□□□□ -1.36
LINC00342-201ENST00000412393 RPS12P25398 132 aaKnown RBP6.58□□□□□ -1.36
LINC00342-201ENST00000412393 CCT4P50991 539 aaKnown RBP6.58□□□□□ -1.36
LINC00342-201ENST00000412393 FOXO4P98177 505 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 SLFN5Q08AF3 891 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 MTMR3Q13615 1198 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 DEFB115Q30KQ5 88 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 TBC1D10BQ4KMP7 808 aaPredicted RBP6.58□□□□□ -1.36
LINC00342-201ENST00000412393 ZC3H12AQ5D1E8 599 aaKnown RBP6.58□□□□□ -1.36
LINC00342-201ENST00000412393 SLC4A10Q6U841 1118 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 MPHOSPH8Q99549 860 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 GLIS2Q9BZE0 524 aaPredicted RBP6.58□□□□□ -1.36
LINC00342-201ENST00000412393 ABCB6Q9NP58 842 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 C9orf78Q9NZ63 289 aaPredicted RBP6.58□□□□□ -1.36
LINC00342-201ENST00000412393 PGAP2Q9UHJ9 254 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 ABT1Q9ULW3 272 aaKnown RBP6.58□□□□□ -1.36
LINC00342-201ENST00000412393 MAPK8IP1Q9UQF2 711 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 JAG2Q9Y219 1238 aa6.58□□□□□ -1.36
LINC00342-201ENST00000412393 MED23Q9ULK4 1368 aa6.57□□□□□ -1.36
LINC00342-201ENST00000412393 TMEM238LA0A1B0GVL6 79 aa6.57□□□□□ -1.36
LINC00342-201ENST00000412393 ANKRD18BA2A2Z9 1011 aa6.57□□□□□ -1.36
LINC00342-201ENST00000412393 WTIPA6NIX2 430 aaPredicted RBP6.57□□□□□ -1.36
LINC00342-201ENST00000412393 RASSF10A6NK89 507 aa6.57□□□□□ -1.36
LINC00342-201ENST00000412393 B4GALNT3Q6L9W6 998 aa6.57□□□□□ -1.36
LINC00342-201ENST00000412393 LMBR1LQ6UX01 489 aa6.57□□□□□ -1.36
LINC00342-201ENST00000412393 ATG14Q6ZNE5 492 aa6.57□□□□□ -1.36
LINC00342-201ENST00000412393 DBX2Q6ZNG2 339 aa6.57□□□□□ -1.36
LINC00342-201ENST00000412393 CDC37L1Q7L3B6 337 aa6.57□□□□□ -1.36
LINC00342-201ENST00000412393 AGBL3Q8NEM8 1001 aa6.57□□□□□ -1.36
LINC00342-201ENST00000412393 FOXQ1Q9C009 403 aa6.57□□□□□ -1.36
LINC00342-201ENST00000412393 SRCIN1Q9C0H9 1055 aa6.57□□□□□ -1.36
LINC00342-201ENST00000412393 ANKRD2Q9GZV1 360 aa6.57□□□□□ -1.36
LINC00342-201ENST00000412393 DCP1AQ9NPI6 582 aaPredicted RBP6.57□□□□□ -1.36
LINC00342-201ENST00000412393 ZNF804BA4D1E1 1349 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 ECM29Q5VYK3 1845 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 CPNE3O75131 537 aaKnown RBP6.56□□□□□ -1.36
LINC00342-201ENST00000412393 CELF2O95319 508 aaKnown RBP6.56□□□□□ -1.36
LINC00342-201ENST00000412393 RAC2P15153 192 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 KCNJ4P48050 445 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 CHRNDQ07001 517 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 IFIT5Q13325 482 aaKnown RBP6.56□□□□□ -1.36
LINC00342-201ENST00000412393 EPHA10Q5JZY3 1008 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 CST9Q5W186 159 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 PDZD3Q86UT5 571 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 USP48Q86UV5 1035 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 SSH1Q8WYL5 1049 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 RELTQ969Z4 430 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 DCPSQ96C86 337 aaKnown RBP6.56□□□□□ -1.36
LINC00342-201ENST00000412393 CSRNP1Q96S65 589 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 DIRC2Q96SL1 478 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 BACH2Q9BYV9 841 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 TMEM39AQ9NV64 488 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 ZNF609O15014 1411 aa6.56□□□□□ -1.36
LINC00342-201ENST00000412393 PTPRCP08575 1304 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 MYH13Q9UKX3 1938 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 ECE1P42892 770 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 ZNF280AP59817 542 aaPredicted RBP6.55□□□□□ -1.36
LINC00342-201ENST00000412393 GRM1Q13255 1194 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 CCDC57Q2TAC2 916 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 ALDH1L2Q3SY69 923 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 TAF7LQ5H9L4 462 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 C22orf34Q6ZV56 151 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 KRT26Q7Z3Y9 468 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 KCT2Q8NC54 265 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 SUCLG2Q96I99 432 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 CCDC136Q96JN2 1154 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 CAPNS2Q96L46 248 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 GMLQ99445 158 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 COA1Q9GZY4 146 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 DNAJC25Q9H1X3 360 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 ZNF408Q9H9D4 720 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 CARS2Q9HA77 564 aaKnown RBP6.55□□□□□ -1.36
LINC00342-201ENST00000412393 PRDM5Q9NQX1 630 aaPredicted RBP6.55□□□□□ -1.36
LINC00342-201ENST00000412393 CNNM1Q9NRU3 951 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 SMC4Q9NTJ3 1288 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 C19orf73Q9NVV2 129 aa6.55□□□□□ -1.36
LINC00342-201ENST00000412393 AKAP11Q9UKA4 1901 aa6.54□□□□□ -1.36
LINC00342-201ENST00000412393 THSD7BQ9C0I4 1608 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms