RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 GNRHR2Q96P88 292 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 JAM3Q9BX67 310 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 CDIP1Q9H305 208 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 ZDHHC9Q9Y397 364 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 TIMM13Q9Y5L4 95 aaPredicted RBP2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 X6R8D5 127 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 LAMTOR5O43504 91 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 LTFP02788 710 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 ITGAEP38570 1179 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 GJA8P48165 433 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 GRIN1Q05586 938 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 KIAA2012Q0VF49 1180 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 KLF10Q13118 480 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 FAM26FQ5R3K3 315 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 PRAMEF18Q5VWM3 479 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 CRIP3Q6Q6R5 217 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 TEPPQ6URK8 271 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 ZNF227Q86WZ6 799 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 DCP2Q8IU60 420 aaKnown RBP2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 TTLL6Q8N841 843 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 SEC14L1Q92503 715 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 DVL3Q92997 716 aaPredicted RBP2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 MRIQ9BWK5 157 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 KLC2Q9H0B6 622 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 KIAA1522Q9P206 1035 aaPredicted RBP2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 SRRDQ9UH36 339 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 PTPN22Q9Y2R2 807 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 PCDHA2Q9Y5H9 948 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 HS3ST3A1Q9Y663 406 aa2.72□□□□□ -1.97
RNU2-55P-201ENST00000411146 NPEPPSL1A6NEC2 478 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 UNCXA6NJT0 531 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 SCAMP3O14828 347 aaKnown RBP2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 SMAD7O15105 426 aaKnown RBP2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 CYP1A1P04798 512 aaPredicted RBP2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 COL6A2P12110 1019 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 TACR2P21452 398 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 SLC6A11P48066 632 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 PPP2CBP62714 309 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 RPL11P62913 178 aaKnown RBP2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 PPP2CAP67775 309 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 COL9A2Q14055 689 aaPredicted RBP2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 NOLC1Q14978 699 aaKnown RBP eCLIP2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 SPDYAQ5MJ70 313 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 KBTBD2Q8IY47 623 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 Q8N1Y9 231 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 TMEM145Q8NBT3 493 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 Q8TCH9 128 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 CPLX3Q8WVH0 158 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 DIO2Q92813 273 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 C1orf159Q96HA4 380 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 TMEM169Q96HH4 297 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 AP5M1Q9H0R1 490 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 MEGF9Q9H1U4 602 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 TSC22D4Q9Y3Q8 395 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 TELO2Q9Y4R8 837 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 SLC12A7Q9Y666 1083 aa2.71□□□□□ -1.98
RNU2-55P-201ENST00000411146 TRBV23OR9-2A0A075B6M9 112 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 NOP56O00567 594 aaKnown RBP2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 HGSO14964 777 aaPredicted RBP2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 SLC27A2O14975 620 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 FOXS1O43638 330 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 SNRPB2P08579 225 aaKnown RBP2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 ETFBP38117 255 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 HMGA2P52926 109 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 NKX3-2P78367 333 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 DGCR2P98153 550 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 SV2CQ496J9 727 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 STEAP3Q658P3 488 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 PKN3Q6P5Z2 889 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 GPR155Q7Z3F1 870 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 RIOX2Q8IUF8 465 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 OR6P1Q8NGX9 317 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 TOE1Q96GM8 510 aaKnown RBP2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 CHAMP1Q96JM3 812 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 MENTQ9BUN1 341 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 TMEM168Q9H0V1 697 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 CLDND1Q9NY35 253 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 DTLQ9NZJ0 730 aa2.7□□□□□ -1.98
RNU2-55P-201ENST00000411146 BLACEA4D250 179 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 PATE3B3GLJ2 98 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 MEFVO15553 781 aaPredicted RBP2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 ZNF623O75123 536 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 KLHL18O94889 574 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 CNOT4O95628 575 aaKnown RBP2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 IL18BPO95998 194 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 SCG5P05408 212 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 CKMP06732 381 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 HOXC12P31275 282 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 KCNJ6P48051 423 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 GLRBP48167 497 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 EPHB4P54760 987 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 MFAP1P55081 439 aaKnown RBP2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 GFRA1P56159 465 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 NFATC3Q12968 1075 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 LSAMPQ13449 338 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 SLC35F1Q5T1Q4 408 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 MROH9Q5TGP6 573 aa2.69□□□□□ -1.98
RNU2-55P-201ENST00000411146 LARP1BQ659C4 914 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms