RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 ROR2Q01974 943 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 NSUN2Q08J23 767 aaKnown RBP eCLIP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 FCHO2Q0JRZ9 810 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 USP4Q13107 963 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 TCEAL1Q15170 157 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 PPP2R5EQ16537 467 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 CCDC183Q5T5S1 534 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 DEPDC1Q5TB30 811 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 KANK3Q6NY19 840 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 KDELC1Q6UW63 502 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 SRGAP1Q7Z6B7 1085 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 MAIP1Q8WWC4 291 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 SDCCAG3Q96C92 435 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 ZNF496Q96IT1 587 aaPredicted RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 CEP295NLQ96MC4 621 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 TUBGCP2Q9BSJ2 902 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 DNAJC11Q9NVH1 559 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.68□□□□□ -1.54e-7■□□□□ 10.4
R3HDM1-204ENST00000410054 MYCLP12524 364 aaPredicted RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 SKIP12755 728 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 GRSF1Q12849 480 aaKnown RBP eCLIP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 MAP3K11Q16584 847 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 BORAQ6PGQ7 559 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 RASGRP2Q7LDG7 609 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 CACNA2D4Q7Z3S7 1137 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 LRRC47Q8N1G4 583 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 FSIP1Q8NA03 581 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 KCTD4Q8WVF5 259 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 RASSF5Q8WWW0 418 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 CNKSR1Q969H4 720 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 KIFC2Q96AC6 838 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 MNTQ99583 582 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 MKNK1Q9BUB5 465 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 CARD14Q9BXL6 1004 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 MRPL9Q9BYD2 267 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 ZFYVE1Q9HBF4 777 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 ANAPC5Q9UJX4 755 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 AKR1B15C9JRZ8 316 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 SRGAP3O43295 1099 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 ACSL4O60488 711 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 NMT2O60551 498 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 CBFA2T3O75081 653 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 CALM1P0DP23 149 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 CALM2P0DP24 149 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 CALM3P0DP25 149 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 IFNA8P32881 189 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 PPARGP37231 505 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 UBXN2AP68543 259 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 NFKB2Q00653 900 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 MINDY4Q4G0A6 757 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 PHLDB3Q6NSJ2 640 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 RD3Q7Z3Z2 195 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 SLFN12Q8IYM2 578 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 TAGAPQ8N103 731 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 TBC1D19Q8N5T2 526 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 C20orf96Q9NUD7 363 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 SESN1Q9Y6P5 492 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 TXNDC9O14530 226 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 RIPK2O43353 540 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 KCNQ3O43525 872 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 DDX58O95786 925 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 PYGLP06737 847 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 FESP07332 822 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 LCP1P13796 627 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 BOLA3Q53S33 107 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 CNNM4Q6P4Q7 775 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 IKBIPQ70UQ0 350 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 C14orf80Q86SX3 495 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 RASSF3Q86WH2 238 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 NCAPG2Q86XI2 1143 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 ARHGAP45Q92619 1136 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 SNX21Q969T3 373 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 CHMP6Q96FZ7 201 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 PRPF18Q99633 342 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 USP26Q9BXU7 913 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 SMARCAD1Q9H4L7 1026 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 HAUS4Q9H6D7 363 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 FBRSL1Q9HCM7 1045 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 HPF1Q9NWY4 346 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 DBNLQ9UJU6 430 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 SPDYE5A6NIY4 337 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 IKBKBO14920 756 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 HSF2BPO75031 334 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 KLHL18O94889 574 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 PRG2P13727 222 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 PRKACBP22694 351 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 NFKBIAP25963 317 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 RARSP54136 660 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 ITGA7Q13683 1181 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 CNGA2Q16280 664 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 HIBCHQ6NVY1 386 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 CCDC13Q8IYE1 715 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 SCYL3Q8IZE3 742 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 FAM133AQ8N9E0 248 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 RNPC3Q96LT9 517 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 HERC2P3Q9BVR0 1158 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 BACH2Q9BYV9 841 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 Q9H521 79 aa5.67□□□□□ -1.5
R3HDM1-204ENST00000410054 NOL6Q9H6R4 1146 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms