RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 ARP10275 920 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 ELNP15502 786 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 ATP2B1P20020 1258 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 CACNB2Q08289 660 aaPredicted RBP17.26■□□□□ 0.35
LSM5-207ENST00000410044 MTMR1Q13613 665 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 ZNF174Q15697 407 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 PRR16Q569H4 304 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 PRAMEF19Q5SWL8 479 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 SEPT14Q6ZU15 432 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 EEPD1Q7L9B9 569 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 SCFD2Q8WU76 684 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 FAM20AQ96MK3 541 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 MTMR9Q96QG7 549 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 KCNMB3Q9NPA1 279 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 POLR3EQ9NVU0 708 aa17.26■□□□□ 0.35
LSM5-207ENST00000410044 DDX41Q9UJV9 622 aaKnown RBP17.26■□□□□ 0.35
LSM5-207ENST00000410044 LAD1O00515 517 aa17.25■□□□□ 0.35
LSM5-207ENST00000410044 MSH4O15457 936 aa17.25■□□□□ 0.35
LSM5-207ENST00000410044 SLC37A4O43826 429 aa17.25■□□□□ 0.35
LSM5-207ENST00000410044 BMP15O95972 392 aa17.25■□□□□ 0.35
LSM5-207ENST00000410044 MCM7P33993 719 aa17.25■□□□□ 0.35
LSM5-207ENST00000410044 NASPP49321 788 aaPredicted RBP17.25■□□□□ 0.35
LSM5-207ENST00000410044 PTPAQ15257 358 aa17.25■□□□□ 0.35
LSM5-207ENST00000410044 ANO1Q5XXA6 986 aa17.25■□□□□ 0.35
LSM5-207ENST00000410044 FBXO16Q8IX29 292 aaPredicted RBP17.25■□□□□ 0.35
LSM5-207ENST00000410044 TRPV1Q8NER1 839 aa17.25■□□□□ 0.35
LSM5-207ENST00000410044 ETNPPLQ8TBG4 499 aa17.25■□□□□ 0.35
LSM5-207ENST00000410044 USP28Q96RU2 1077 aa17.25■□□□□ 0.35
LSM5-207ENST00000410044 AGO4Q9HCK5 861 aaKnown RBP17.25■□□□□ 0.35
LSM5-207ENST00000410044 PDGFCQ9NRA1 345 aa17.25■□□□□ 0.35
LSM5-207ENST00000410044 CFAP45Q9UL16 551 aa17.25■□□□□ 0.35
LSM5-207ENST00000410044 NKRFO15226 690 aaKnown RBP eCLIP17.24■□□□□ 0.35
LSM5-207ENST00000410044 NEMFO60524 1076 aa17.24■□□□□ 0.35
LSM5-207ENST00000410044 ATP2C1P98194 919 aaPredicted RBP17.24■□□□□ 0.35
LSM5-207ENST00000410044 TRIM32Q13049 653 aa17.24■□□□□ 0.35
LSM5-207ENST00000410044 PTGDRQ13258 359 aa17.24■□□□□ 0.35
LSM5-207ENST00000410044 NBR1Q14596 966 aa17.24■□□□□ 0.35
LSM5-207ENST00000410044 TTLL4Q14679 1199 aa17.24■□□□□ 0.35
LSM5-207ENST00000410044 SF3A1Q15459 793 aaKnown RBP17.24■□□□□ 0.35
LSM5-207ENST00000410044 CCDC144BQ3MJ40 725 aa17.24■□□□□ 0.35
LSM5-207ENST00000410044 GIMAP8Q8ND71 665 aaPredicted RBP17.24■□□□□ 0.35
LSM5-207ENST00000410044 HAS1Q92839 578 aa17.24■□□□□ 0.35
LSM5-207ENST00000410044 SLC5A5Q92911 643 aa17.24■□□□□ 0.35
LSM5-207ENST00000410044 RIT2Q99578 217 aa17.24■□□□□ 0.35
LSM5-207ENST00000410044 TMEM60Q9H2L4 133 aa17.24■□□□□ 0.35
LSM5-207ENST00000410044 FAM184BQ9ULE4 1060 aa17.24■□□□□ 0.35
LSM5-207ENST00000410044 CEP131Q9UPN4 1083 aa17.24■□□□□ 0.35
LSM5-207ENST00000410044 CLIC4Q9Y696 253 aa17.24■□□□□ 0.35
LSM5-207ENST00000410044 NFASCO94856 1347 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 DHX15O43143 795 aaKnown RBP17.23■□□□□ 0.35
LSM5-207ENST00000410044 SEPT4O43236 478 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 ATP9AO75110 1047 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 ARIH2O95376 493 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 YEATS4O95619 227 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 INHAP05111 366 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 PRKAR2AP13861 404 aaKnown RBP17.23■□□□□ 0.35
LSM5-207ENST00000410044 KCNA2P16389 499 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 PRPHP41219 470 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 ADCYAP1R1P41586 468 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 SP2Q02086 613 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 DNM1Q05193 864 aaKnown RBP17.23■□□□□ 0.35
LSM5-207ENST00000410044 NEDD9Q14511 834 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 SLC39A14Q15043 492 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 DUSP28Q4G0W2 176 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 ARL6IP4Q66PJ3 421 aaKnown RBP17.23■□□□□ 0.35
LSM5-207ENST00000410044 CLEC17AQ6ZS10 378 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 POTEDQ86YR6 584 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 SLFN12Q8IYM2 578 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 LINC00301Q8NCQ3 95 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 TBC1D22BQ9NU19 505 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 TFIP11Q9UBB9 837 aaKnown RBP17.23■□□□□ 0.35
LSM5-207ENST00000410044 RCOR1Q9UKL0 485 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 Q9Y3F1 56 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 MRVI1Q9Y6F6 885 aa17.23■□□□□ 0.35
LSM5-207ENST00000410044 IPO5O00410 1097 aaKnown RBP17.22■□□□□ 0.35
LSM5-207ENST00000410044 PSMD10O75832 226 aa17.22■□□□□ 0.35
LSM5-207ENST00000410044 BAG4O95429 457 aaKnown RBP17.22■□□□□ 0.35
LSM5-207ENST00000410044 TXNP10599 105 aaKnown RBP17.22■□□□□ 0.35
LSM5-207ENST00000410044 AKR1A1P14550 325 aa17.22■□□□□ 0.35
LSM5-207ENST00000410044 NKX3-2P78367 333 aa17.22■□□□□ 0.35
LSM5-207ENST00000410044 CALCRLQ16602 461 aa17.22■□□□□ 0.35
LSM5-207ENST00000410044 B3GNT9Q6UX72 402 aa17.22■□□□□ 0.35
LSM5-207ENST00000410044 ZNF577Q9BSK1 485 aa17.22■□□□□ 0.35
LSM5-207ENST00000410044 ZHX1Q9UKY1 873 aaPredicted RBP17.22■□□□□ 0.35
LSM5-207ENST00000410044 GNEQ9Y223 722 aaKnown RBP17.22■□□□□ 0.35
LSM5-207ENST00000410044 OR52Z1P0C646 297 aa17.21■□□□□ 0.35
LSM5-207ENST00000410044 SMPD1P17405 629 aa17.21■□□□□ 0.35
LSM5-207ENST00000410044 KRT85P78386 507 aa17.21■□□□□ 0.35
LSM5-207ENST00000410044 TNFAIP2Q03169 654 aa17.21■□□□□ 0.35
LSM5-207ENST00000410044 LY6KQ17RY6 165 aa17.21■□□□□ 0.35
LSM5-207ENST00000410044 SLC9C1Q4G0N8 1177 aa17.21■□□□□ 0.35
LSM5-207ENST00000410044 CELF3Q5SZQ8 465 aaKnown RBP17.21■□□□□ 0.35
LSM5-207ENST00000410044 TNPO1Q92973 898 aaKnown RBP17.21■□□□□ 0.35
LSM5-207ENST00000410044 EMID1Q96A84 441 aaPredicted RBP17.21■□□□□ 0.35
LSM5-207ENST00000410044 ARMC5Q96C12 935 aa17.21■□□□□ 0.35
LSM5-207ENST00000410044 FTOQ9C0B1 505 aaKnown RBP eCLIP17.21■□□□□ 0.35
LSM5-207ENST00000410044 HMX1Q9NP08 348 aaPredicted RBP17.21■□□□□ 0.35
LSM5-207ENST00000410044 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.2■□□□□ 0.34
LSM5-207ENST00000410044 PPP6R2O75170 966 aa17.2■□□□□ 0.34
LSM5-207ENST00000410044 DUSP11O75319 330 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms