RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 POU3F2P20265 443 aaPredicted RBP7.88□□□□□ -1.15
LSM5-203ENST00000409782 RAB6AP20340 208 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 MTHFSP49914 203 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 CBX2Q14781 532 aaPredicted RBP7.88□□□□□ -1.15
LSM5-203ENST00000409782 NFKBIBQ15653 356 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 ZNF827Q17R98 1081 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 SV2CQ496J9 727 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 RNF43Q68DV7 783 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 ZNF530Q6P9A1 599 aaPredicted RBP7.88□□□□□ -1.15
LSM5-203ENST00000409782 PPFIBP1Q86W92 1011 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 CCAR1Q8IX12 1150 aaKnown RBP7.88□□□□□ -1.15
LSM5-203ENST00000409782 KCT2Q8NC54 265 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 ZNF507Q8TCN5 953 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 CCDC74BQ96LY2 380 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 SLC6A18Q96N87 628 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 HAUS7Q99871 368 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 KLHL25Q9H0H3 589 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 FAM105AQ9NUU6 356 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 TCEAL9Q9UHQ7 104 aa7.88□□□□□ -1.15
LSM5-203ENST00000409782 ZNF831Q5JPB2 1677 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 IGLV1-40P01703 118 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 NTF4P34130 210 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 TBX4P57082 545 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 NFIAQ12857 509 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 C21orf62-AS1Q17RA5 79 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 ANKRD39Q53RE8 183 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 FAM209AQ5JX71 171 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 WWC2Q6AWC2 1192 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 SULT6B1Q6IMI4 303 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 NECAB2Q7Z6G3 386 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 LRRTM3Q86VH5 581 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 C12orf40Q86WS4 652 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 TMEM192Q8IY95 271 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 AHI1Q8N157 1196 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 ZNF513Q8N8E2 541 aaPredicted RBP7.87□□□□□ -1.15
LSM5-203ENST00000409782 RNF214Q8ND24 703 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 RIN3Q8TB24 985 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 EZH1Q92800 747 aaPredicted RBP7.87□□□□□ -1.15
LSM5-203ENST00000409782 FANCD2OSQ96PS1 177 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 FAM126AQ9BYI3 521 aaPredicted RBP7.87□□□□□ -1.15
LSM5-203ENST00000409782 MTFR1LQ9H019 292 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 GSX1Q9H4S2 264 aaPredicted RBP7.87□□□□□ -1.15
LSM5-203ENST00000409782 TMOD3Q9NYL9 352 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 RIPOR2Q9Y4F9 1068 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 TAF1LQ8IZX4 1826 aa7.87□□□□□ -1.15
LSM5-203ENST00000409782 COL24A1Q17RW2 1714 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 ADAMTS7Q9UKP4 1686 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 PNPLA7Q6ZV29 1317 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 UBOX5O94941 541 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 NFICP08651 508 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 POLR2BP30876 1174 aaKnown RBP7.86□□□□□ -1.15
LSM5-203ENST00000409782 L1CAMP32004 1257 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 PPP2R2AP63151 447 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 C1orf141Q5JVX7 400 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 HEATR6Q6AI08 1181 aaKnown RBP7.86□□□□□ -1.15
LSM5-203ENST00000409782 ZNF227Q86WZ6 799 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 CERS3Q8IU89 383 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 GIMAP7Q8NHV1 300 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 CYB5D2Q8WUJ1 264 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 PIGBQ92521 554 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 DBNDD2Q9BQY9 259 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 TARS2Q9BW92 718 aaKnown RBP7.86□□□□□ -1.15
LSM5-203ENST00000409782 ACSS3Q9H6R3 686 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 PICK1Q9NRD5 415 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 DISC1Q9NRI5 854 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 C4BP0C0L5 1744 aa7.86□□□□□ -1.15
LSM5-203ENST00000409782 CICQ96RK0 1608 aaPredicted RBP7.85□□□□□ -1.15
LSM5-203ENST00000409782 ERVV-2B6SEH9 535 aa7.85□□□□□ -1.15
LSM5-203ENST00000409782 CBFA2T2O43439 604 aa7.85□□□□□ -1.15
LSM5-203ENST00000409782 RNGTTO60942 597 aaKnown RBP7.85□□□□□ -1.15
LSM5-203ENST00000409782 CLEC3AO75596 197 aa7.85□□□□□ -1.15
LSM5-203ENST00000409782 ZBTB7AO95365 584 aa7.85□□□□□ -1.15
LSM5-203ENST00000409782 EYA4O95677 639 aa7.85□□□□□ -1.15
LSM5-203ENST00000409782 EPHX1P07099 455 aa7.85□□□□□ -1.15
LSM5-203ENST00000409782 NFE2Q16621 373 aaPredicted RBP7.85□□□□□ -1.15
LSM5-203ENST00000409782 CCSAPQ6IQ19 270 aaPredicted RBP7.85□□□□□ -1.15
LSM5-203ENST00000409782 PHACTR4Q8IZ21 702 aa7.85□□□□□ -1.15
LSM5-203ENST00000409782 DDX1Q92499 740 aaKnown RBP7.85□□□□□ -1.15
LSM5-203ENST00000409782 CFAP53Q96M91 514 aa7.85□□□□□ -1.15
LSM5-203ENST00000409782 CLUHP3Q96NS8 147 aa7.85□□□□□ -1.15
LSM5-203ENST00000409782 PDGFDQ9GZP0 370 aaPredicted RBP7.85□□□□□ -1.15
LSM5-203ENST00000409782 GBP3Q9H0R5 595 aa7.85□□□□□ -1.15
LSM5-203ENST00000409782 SEMA6CQ9H3T2 930 aa7.85□□□□□ -1.15
LSM5-203ENST00000409782 DAGLAQ9Y4D2 1042 aa7.85□□□□□ -1.15
LSM5-203ENST00000409782 MAP3K5Q99683 1374 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 SCN11AQ9UI33 1791 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 PRC1O43663 620 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 EFCAB14O75071 495 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 ITGAVP06756 1048 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 PABPC1P11940 636 aaKnown RBP7.84□□□□□ -1.15
LSM5-203ENST00000409782 ITGB7P26010 798 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 TTLL4Q14679 1199 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 DHCR24Q15392 516 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 PPM1JQ5JR12 505 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 SMYD4Q8IYR2 804 aaPredicted RBP7.84□□□□□ -1.15
LSM5-203ENST00000409782 CRACR2BQ8N4Y2 399 aaPredicted RBP7.84□□□□□ -1.15
LSM5-203ENST00000409782 GSTCDQ8NEC7 633 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 OSBP2Q969R2 916 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 RCC1LQ96I51 464 aaKnown RBP7.84□□□□□ -1.15
LSM5-203ENST00000409782 SSU72Q9NP77 194 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms